mRNA_H-elongata_contig105104.424.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig105104.424.1 vs. uniprot
Match: D7G057_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G057_ECTSI) HSP 1 Score: 224 bits (570), Expect = 7.750e-68 Identity = 109/171 (63.74%), Postives = 131/171 (76.61%), Query Frame = 1
Query: 28 QATTLLGCGIMALGVFLSSFSPNLGVFMLSYALLFGAGVGIAYTAPMVNGWKWFPDKKGLVSGAVVAGFGSGGFV----GTKMINPNGLNAVGGVYPDEVYENFPVMLRKLALIYIVTSCVGALAIRPPPPVETPKSLESAEKGGP---AVVGASLGEALMDKKFWLMWFM 519
QATT LGCGIMALGVFLSS++PNL +FM Y+ +FG+G+G+AYTAPMVNGW+WFP +KG+VSGAVVAGFG+GGFV GT +INP GL+AV GVYPDEVY NFPVMLRKLALIY + + +G+ IRPPP PK + G A G SL + + DK+FWLMWFM
Sbjct: 166 QATTALGCGIMALGVFLSSYAPNLAIFMFCYSFMFGSGIGLAYTAPMVNGWRWFPSRKGMVSGAVVAGFGAGGFVFNQVGTGIINPKGLDAVDGVYPDEVYANFPVMLRKLALIYFLVAALGSTVIRPPPVAAAPKGGRNNRGHGKVQAAATGTSLKQVVKDKRFWLMWFM 336
BLAST of mRNA_H-elongata_contig105104.424.1 vs. uniprot
Match: A0A835ZED6_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZED6_9STRA) HSP 1 Score: 189 bits (481), Expect = 7.390e-55 Identity = 96/171 (56.14%), Postives = 121/171 (70.76%), Query Frame = 1
Query: 28 QATTLLGCGIMALGVFLSSFSPNLGVFMLSYALLFGAGVGIAYTAPMVNGWKWFPDKKGLVSGAVVAGFGSGGF----VGTKMINPNGLNAVGGVYPDEVYENFPVMLRKLALIYIVTSCVGALAIRPPPPVETPKSLESAEKGGPAV---VGASLGEALMDKKFWLMWFM 519
+ TL+GC +MA GV LSS++ +L FM Y+ +FGAGVGIAYTAPMVNGW+WFP KKGLVSG VVAGFG+GGF VG+++INP+G++AV GVYP +Y FPVMLRKLALIY + +GAL + PPPPV T G PA +G SL +A+ + FW +W M
Sbjct: 148 RGATLVGCWLMAAGVLLSSYAKSLAAFMFCYSFMFGAGVGIAYTAPMVNGWRWFPGKKGLVSGCVVAGFGAGGFIFNQVGSRIINPSGISAVDGVYPAAIYAAFPVMLRKLALIYFTLTGLGALLVNPPPPVVT-------AVGAPATAPPLGTSLRDAVRSRAFWSLWLM 311
BLAST of mRNA_H-elongata_contig105104.424.1 vs. uniprot
Match: A0A7S1XR46_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XR46_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.590e-45 Identity = 79/168 (47.02%), Postives = 113/168 (67.26%), Query Frame = 1
Query: 22 DPQATTLLGCGIMALGVFLSSFSPNLGVFMLSYALLFGAGVGIAYTAPMVNGWKWFPDKKGLVSGAVVAGFGSGGF----VGTKMINPNGLNAVGGVYPDEVYENFPVMLRKLALIYIVTSCVGALAIRPPPPVETPKSLESAEKGGPAVVGASLGEALMDKKFWLMW 513
P LLG IMA GV+LSS++ +L FM+ Y++LFG G+G+AYT+ V GWKWFP ++GLVSG+V+ GFG+GGF +GT ++NP+ + + GV+PD VY +P+MLR LA+IY V + VGA IR PP ++ A PAV ++ EA+ K+FW++W
Sbjct: 113 SPSKVALLGAWIMAAGVYLSSYATDLTTFMIGYSVLFGIGIGMAYTSAWVEGWKWFPRRRGLVSGSVLTGFGAGGFFFNKIGTSLVNPDNMQTIDGVFPDAVYSRWPLMLRSLAIIYAVLAAVGAFLIRTPPKGYAVEAAPGAADA-PAVKSLTVKEAVATKQFWMIW 279
BLAST of mRNA_H-elongata_contig105104.424.1 vs. uniprot
Match: A0A7R9U6G1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6G1_9STRA) HSP 1 Score: 160 bits (404), Expect = 3.280e-43 Identity = 77/167 (46.11%), Postives = 111/167 (66.47%), Query Frame = 1
Query: 25 PQATTLLGCGIMALGVFLSSFSPNLGVFMLSYALLFGAGVGIAYTAPMVNGWKWFPDKKGLVSGAVVAGFGSGGF----VGTKMINPNGLNAVGGVYPDEVYENFPVMLRKLALIYIVTSCVGALAIRPPPPVETPKSLESAEKGGPAVVGASLGEALMDKKFWLMW 513
P+ L+G +M GV+LSS++ +L FM+ Y+++FG G+G AYTA V GWKWFP ++GLVSGAV+ GFG+GGF +GTK+ NPN LNA+ G +P EVY N+ MLR LA+IY + +GA IRPPP + + + G + ++ +A+ K+FWL+W
Sbjct: 193 PRVVALIGSWVMVTGVYLSSYATDLNTFMVFYSMIFGLGIGSAYTAAWVEGWKWFPRRRGLVSGAVLTGFGAGGFFFNRIGTKLANPNNLNAIDGTFPMEVYSNWGYMLRSLAVIYGTMTAIGAFLIRPPPKSYVTLNSQGLKSAGTRSL--TVPQAIRTKQFWLIW 357
BLAST of mRNA_H-elongata_contig105104.424.1 vs. uniprot
Match: F0YGF5_AURAN (F-box domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGF5_AURAN) HSP 1 Score: 151 bits (381), Expect = 5.160e-39 Identity = 73/131 (55.73%), Postives = 94/131 (71.76%), Query Frame = 1
Query: 25 PQATTLLGCGIMALGVFLSSFSPNLGVFMLSYALLFGAGVGIAYTAPMVNGWKWFPDKKGLVSGAVVAGFGSGGF----VGTKMINPNGLNAVGGVYPDEVYENFPVMLRKLALIYIVTSCVGALAIRPPP 405
P+A TL G G++ALGVFL+SF+ L F+ Y+ L GAG+ +AYTAP+V GW WFPD +G V+GAV+ GFG+GGF +GT++ NP G+ A GG +PDEVY NFPVMLRKLAL+Y VG + P P
Sbjct: 138 PRAATLGGGGLVALGVFLASFATTLRAFLACYSGLVGAGIALAYTAPLVAGWSWFPDARGFVNGAVLMGFGAGGFFFNLLGTRLANPGGVPASGGAFPDEVYANFPVMLRKLALVYGAVVAVGGSLVAPRP 268
BLAST of mRNA_H-elongata_contig105104.424.1 vs. uniprot
Match: W7TW79_9STRA (Major facilitator superfamily domain, general substrate transporter n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TW79_9STRA) HSP 1 Score: 149 bits (375), Expect = 1.430e-38 Identity = 82/169 (48.52%), Postives = 109/169 (64.50%), Query Frame = 1
Query: 40 LLGCGIMALGVFLSSFSPNLGVFMLSYALLFGAGVGIAYTAPMVNGWKWFPDKKGLVSGAVVAGFGSGGF----VGTKMINPNGLNAVGGVYPDEVYENFPVMLRKLALIYIVTSCVGALAIRPP--PPVETPKSLESAEKGGPAVVGASL--GEALMDKKFWLMWFMV 522
LLGC +MA GVFLSSF+ +L +FML Y+L FG GVGIAYTAP+V GWKWFPD KGLVSGAV+ GFG+GGF +GTK+INP + G + + F +LRKLA Y+ + +G+L + P P ++ KS K AV+G G+AL +FW +W ++
Sbjct: 159 LLGCLLMATGVFLSSFATSLSMFMLFYSLFFGVGVGIAYTAPIVAGWKWFPDNKGLVSGAVLTGFGAGGFFFNLLGTKIINPLNEKPIKGAFSPALTAGFAPLLRKLAGCYVALAVLGSLLVSAPKSPAIQAGKS-----KAKQAVIGPDYTPGQALTSLQFWWIWAII 322
BLAST of mRNA_H-elongata_contig105104.424.1 vs. uniprot
Match: A0A7S2IZ45_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IZ45_9EUKA) HSP 1 Score: 129 bits (325), Expect = 1.500e-32 Identity = 70/192 (36.46%), Postives = 103/192 (53.65%), Query Frame = 1
Query: 25 PQATTLLGCGIMALGVFLSSFSPNLGVFMLSYALLFGAGVGIAYTAPMVNGWKWFPDKKGLVSGAVVAGFGSGGFV----GTKMINPNGLNAVGGVYPDEVYENFPVMLRKLALIYIVTSCVGALAIRPPP------------------PVETPKSLESAEKGGPAVVGASLGEALMDKKFWLMWFMVRHDA 534
PQ T L+G +M GVF +S++ +LG F+LS++LLFG GVGI Y P + G +WFP KKG V GA+++G G+ F+ TK+INP G++AVGG +P+ V +P +LR L + Y + GA+ PP P PK S A S+ ++ +F +MW M+ + A
Sbjct: 57 PQLTALIGGVMMGTGVFFASYAKSLGQFVLSFSLLFGLGVGIVYQMPFLTGGRWFPTKKGTVQGAIISGMGASAFLFNMLATKLINPTGIDAVGGTFPEVVTSRWPALLRTLGICYTTLALCGAMLQANPPSLGKKYPVIEYLRGRRSAPPSPPKCKVSPPVPASAAASRSVISDVLSPRFLIMWLMIINSA 248
BLAST of mRNA_H-elongata_contig105104.424.1 vs. uniprot
Match: A0A6V2TA03_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6V2TA03_EMIHU) HSP 1 Score: 125 bits (313), Expect = 2.320e-30 Identity = 75/192 (39.06%), Postives = 105/192 (54.69%), Query Frame = 1
Query: 25 PQATTLLGCGIMALGVFLSSFSPNLGVFMLSYALLFGAGVGIAYTAPMVNGWKWFPDKKGLVSGAVVAGFGSGGFV----GTKMINPNGLNAVGGVYPDEVYENFPVMLRKLALIYIVTSCVGALAIRPPPP----------------VETPKSLES--AEKGGPAVVGASLGEALMDKKFWLMWFMVRHDA 534
P T LLG +M +GV ++ +P+L F + YA++FG GVG+AY P++ G +WFP KKG+V+G+VV G G+ F+ T++INP GLNAVGGV+P EVY N+P +R L +Y + GAL P TPK+ ++ A GGP SL + KF MW M+ A
Sbjct: 148 PTLTALLGALMMGIGVMAAATAPSLASFCVCYAVVFGLGVGVAYQMPIIAGGRWFPAKKGVVTGSVVTGMGASAFLFNLLATRLINPKGLNAVGGVFPAEVYANWPHAIRTLGSLYTGLAVCGALLQSNPSSFAGAYPWRDALCGKRHAPTPKARKAVAAAPGGP-----SLPSLVFAPKFAAMWLMILGSA 334
BLAST of mRNA_H-elongata_contig105104.424.1 vs. uniprot
Match: A0A7S4BP16_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BP16_CHRCT) HSP 1 Score: 113 bits (282), Expect = 1.000e-26 Identity = 56/125 (44.80%), Postives = 81/125 (64.80%), Query Frame = 1
Query: 25 PQATTLLGCGIMALGVFLSSFSPNLGVFMLSYALLFGAGVGIAYTAPMVNGWKWFPDKKGLVSGAVVAGFGSGGFV----GTKMINPNGLNAVGGVYPDEVYENFPVMLRKLALIYIVTSCVGAL 387
P+ T LLG +M GV L++ + L F+L ++++FG GVGIAY P + G +WFP KKG+V+GA+++G G F+ TK+INP L AV +P E+Y ++P +LR L LIY + VGAL
Sbjct: 151 PRLTALLGALMMGCGVTLAASAKTLKHFVLLWSVMFGLGVGIAYQQPFITGARWFPKKKGMVTGAIISGLGVSAFLFNILSTKLINPKNLEAVNDAFPPEIYASWPSLLRTLGLIYGTLAVVGAL 275
BLAST of mRNA_H-elongata_contig105104.424.1 vs. uniprot
Match: A0A0M0KBY1_9EUKA (Major facilitator superfamily protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0KBY1_9EUKA) HSP 1 Score: 112 bits (281), Expect = 2.910e-26 Identity = 55/129 (42.64%), Postives = 81/129 (62.79%), Query Frame = 1
Query: 28 QATTLLGCGIMALGVFLSSFSPNLGVFMLSYALLFGAGVGIAYTAPMVNGWKWFPDKKGLVSGAVVAGFGSGGF----VGTKMINPNGLNAVGGVYPDEVYENFPVMLRKLALIYIVTSCVGALAIRPP 402
+ T LLG +M GV L+S++ +L F+ + ++FG GVGIAY P++ G KWFP KG VSGAV+ G G+ F + T ++NP G+N VGG++P +Y ++P +LR L IY+ +GA PP
Sbjct: 65 RKTALLGSVLMGSGVILASYATSLATFVPFFCVMFGLGVGIAYQMPILTGTKWFPKSKGGVSGAVIFGMGASAFFFNKLATAIVNPTGINPVGGLFPASIYASWPKLLRTLGSIYLACGLIGASFQVPP 193 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105104.424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig105104.424.1 >prot_H-elongata_contig105104.424.1 ID=prot_H-elongata_contig105104.424.1|Name=mRNA_H-elongata_contig105104.424.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=183bp MTVPATRDPQATTLLGCGIMALGVFLSSFSPNLGVFMLSYALLFGAGVGIback to top mRNA from alignment at H-elongata_contig105104:1294..2241- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig105104.424.1 ID=mRNA_H-elongata_contig105104.424.1|Name=mRNA_H-elongata_contig105104.424.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=948bp|location=Sequence derived from alignment at H-elongata_contig105104:1294..2241- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig105104:1294..2241- >mRNA_H-elongata_contig105104.424.1 ID=mRNA_H-elongata_contig105104.424.1|Name=mRNA_H-elongata_contig105104.424.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1098bp|location=Sequence derived from alignment at H-elongata_contig105104:1294..2241- (Himanthalia elongata Himel1 dioecious)back to top |