mRNA_H-elongata_contig105033.419.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig105033.419.1 vs. uniprot
Match: A0A6H5KAY1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAY1_9PHAE) HSP 1 Score: 263 bits (671), Expect = 2.160e-86 Identity = 126/132 (95.45%), Postives = 131/132 (99.24%), Query Frame = 1
Query: 1 MKDLFPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTHMGVWQFRSSWEDSIIGGRISVAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKEGFQLAKKFPLDGNDG 396
MKDLFPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNT +GVWQFRS+WEDSIIGGRIS+AGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIK+GFQLAKKFPLDGN+G
Sbjct: 122 MKDLFPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTQIGVWQFRSTWEDSIIGGRISIAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKDGFQLAKKFPLDGNNG 253
BLAST of mRNA_H-elongata_contig105033.419.1 vs. uniprot
Match: A0A835Z0G9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0G9_9STRA) HSP 1 Score: 223 bits (569), Expect = 1.490e-71 Identity = 102/132 (77.27%), Postives = 122/132 (92.42%), Query Frame = 1
Query: 1 MKDLFPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTHMGVWQFRSSWEDSIIGGRISVAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKEGFQLAKKFPLDGNDG 396
+KDLFP+V +S +PTT+LKLRK PLKTV+TLGADYNT++G+WQFRSSWEDSIIGGRISVAGRE+ML+KSWL+KVMDSEDVATRLKF+AA+NT+DWTAYAKFG RTERI+PLN++EGF L ++ PLDGN G
Sbjct: 75 VKDLFPHVSLSCEPTTTLKLRKIFTPLKTVVTLGADYNTNIGIWQFRSSWEDSIIGGRISVAGRELMLSKSWLIKVMDSEDVATRLKFKAAVNTKDWTAYAKFGLRTERIAPLNVREGFTLCRRLPLDGNRG 206
BLAST of mRNA_H-elongata_contig105033.419.1 vs. uniprot
Match: A0A4D9CS25_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CS25_9STRA) HSP 1 Score: 183 bits (464), Expect = 3.400e-55 Identity = 80/130 (61.54%), Postives = 103/130 (79.23%), Query Frame = 1
Query: 7 DLFPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTHMGVWQFRSSWEDSIIGGRISVAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKEGFQLAKKFPLDGNDG 396
DL P RV ++P T+LKLRKR YP KTV+ LGADYNT +GVWQF+SSWED IIGGR++V GRE+ +K+WL+ + D +D+ATRLKFRA I+T W +YA+ GFRTERI PLN+K+G L ++ PLDG +G
Sbjct: 115 DLIPRFRVKVEPLTTLKLRKRFYPFKTVIELGADYNTQIGVWQFKSSWEDRIIGGRLTVKGRELQFSKTWLVTLGDQDDIATRLKFRAGIDTGTWRSYARLGFRTERIQPLNLKDGVTLRRRLPLDGTEG 244
BLAST of mRNA_H-elongata_contig105033.419.1 vs. uniprot
Match: W7U3J5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3J5_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.430e-53 Identity = 80/130 (61.54%), Postives = 103/130 (79.23%), Query Frame = 1
Query: 7 DLFPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTHMGVWQFRSSWEDSIIGGRISVAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKEGFQLAKKFPLDGNDG 396
DL P RV ++P T+LKLRKR YP KTV+ LGADYNT +GVWQF+SSWED IIGGR++V GRE+ +K+WL+ + D +D+ATRLKFRA I+T W +YA+ GFRTERI PLN+K+G L ++ PLDG +G
Sbjct: 264 DLIPRFRVKVEPLTTLKLRKRFYPFKTVIELGADYNTQIGVWQFKSSWEDRIIGGRLTVKGRELQFSKTWLVTLGDQDDIATRLKFRAGIDTGTWRSYARLGFRTERIQPLNLKDGVTLRRRLPLDGTEG 393
BLAST of mRNA_H-elongata_contig105033.419.1 vs. uniprot
Match: A0A7S1BGQ1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BGQ1_9STRA) HSP 1 Score: 177 bits (450), Expect = 2.370e-53 Identity = 80/131 (61.07%), Postives = 105/131 (80.15%), Query Frame = 1
Query: 4 KDLFPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTHMGVWQFRSSWEDSIIGGRISVAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKEGFQLAKKFPLDGNDG 396
+D FP ++V DP T+LKLRKR PLKTVLTLGAD+ T +GVWQF+SSWEDS+IGGR+++ GRE+ ++K+WLL V ED+ TRL+ RAA++ AYA+FGFRTER+SP+N+ EGF L K FPLDG++G
Sbjct: 92 RDKFPGLKVRTDPRTTLKLRKRFRPLKTVLTLGADFETQLGVWQFKSSWEDSLIGGRLTLNGRELQMSKTWLLSVGAVEDLVTRLRLRAAVDLATGKAYARFGFRTERLSPINVVEGFTLKKMFPLDGSNG 222
BLAST of mRNA_H-elongata_contig105033.419.1 vs. uniprot
Match: B7G885_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G885_PHATC) HSP 1 Score: 177 bits (450), Expect = 2.000e-52 Identity = 77/130 (59.23%), Postives = 105/130 (80.77%), Query Frame = 1
Query: 13 FPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTHMGVWQFRSSWEDSIIGGRISVAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKEGFQLAKKFPLDGNDGEI 402
+P ++ ++PTT+LK+RK PLKTV+ LGAD+NT +GVWQFRSSWED+IIGG++++AGRE+ L+KSW L V ED+ TRL+FRAA++ + W AYA+ GFRTER+SP+N+ EGF L K+ PLDGN G +
Sbjct: 174 WPKIQCRVEPTTTLKIRKTFRPLKTVVQLGADFNTQLGVWQFRSSWEDAIIGGKLTLAGRELQLSKSWQLSVGAVEDLVTRLRFRAAVDLQTWKAYARVGFRTERLSPINVMEGFTLLKQLPLDGNHGHV 303
BLAST of mRNA_H-elongata_contig105033.419.1 vs. uniprot
Match: A0A7S1TRT3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRT3_9STRA) HSP 1 Score: 171 bits (434), Expect = 2.110e-50 Identity = 75/132 (56.82%), Postives = 99/132 (75.00%), Query Frame = 1
Query: 7 DLFPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTHMGVWQFRSSWEDSIIGGRISVAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKEGFQLAKKFPLDGNDGEI 402
D FP VR +P+T+LKLRKR YPLKT LTLGADYNT +G+WQF SSWED IIGGR+S GRE+ L+K W+LK+ ++ D+ +L FRAA++T YAKFG+R E++ P+N++EG +K PLDG DG +
Sbjct: 135 DYFPRVRCHFEPSTTLKLRKRFYPLKTRLTLGADYNTQLGIWQFISSWEDQIIGGRLSFRGRELQLSKKWMLKIDEASDLIAKLTFRAALDTSTGATYAKFGWRFEKLEPINVREGIPWRQKLPLDGPDGHV 266
BLAST of mRNA_H-elongata_contig105033.419.1 vs. uniprot
Match: A0A7S2S8R8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S8R8_9STRA) HSP 1 Score: 170 bits (431), Expect = 5.220e-50 Identity = 74/130 (56.92%), Postives = 102/130 (78.46%), Query Frame = 1
Query: 13 FPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTHMGVWQFRSSWEDSIIGGRISVAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKEGFQLAKKFPLDGNDGEI 402
FP ++ ++P T+LK+RK PLKTV+ LGAD+NT +GVWQF+SSWEDS+IGG++++AGRE+ L+K+WLL V ED+ TRL+FRAA++ AYA+ GFRTER+SP+N+ EGF L K+ PLDG G +
Sbjct: 135 FPKLQCRVEPNTTLKVRKTFRPLKTVIRLGADFNTQLGVWQFKSSWEDSLIGGKLTLAGREIQLSKTWLLSVGAVEDLVTRLRFRAAVDLGTMKAYARLGFRTERLSPINVVEGFTLMKQLPLDGTQGHV 264
BLAST of mRNA_H-elongata_contig105033.419.1 vs. uniprot
Match: A0A7S1GJA6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GJA6_CYCTE) HSP 1 Score: 168 bits (425), Expect = 9.520e-50 Identity = 73/130 (56.15%), Postives = 103/130 (79.23%), Query Frame = 1
Query: 13 FPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTHMGVWQFRSSWEDSIIGGRISVAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKEGFQLAKKFPLDGNDGEI 402
FP ++ +DPTT+LK++K PLKT++ LGA++NT +GVWQF+SSWED+IIGG++++AGRE+ LTKSW L + ED+ TRL+FRAA++ + AYA+ GFRTER+SP+N+ EGF L + PLDG +G I
Sbjct: 81 FPKLQCRIDPTTTLKIQKTFRPLKTIVRLGAEFNTQLGVWQFKSSWEDAIIGGKLTLAGRELQLTKSWQLSMGPMEDLVTRLRFRAAVDLQTMKAYARVGFRTERLSPINMMEGFTLQHQIPLDGQNGHI 210
BLAST of mRNA_H-elongata_contig105033.419.1 vs. uniprot
Match: A0A7S3Q958_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q958_9STRA) HSP 1 Score: 167 bits (422), Expect = 2.590e-48 Identity = 72/129 (55.81%), Postives = 100/129 (77.52%), Query Frame = 1
Query: 16 PNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTHMGVWQFRSSWEDSIIGGRISVAGREVMLTKSWLLKVMDSEDVATRLKFRAAINTRDWTAYAKFGFRTERISPLNIKEGFQLAKKFPLDGNDGEI 402
P ++ ++P T+LK+RK PLKTV+ LGAD+NT +GVWQF+SSWED +IGG++++AGRE+ +K+WLL V ED+ TRL+ RAA++ AYA+ GFRTER+SP+N+ EGF L K+ PLDGNDG +
Sbjct: 167 PKLQCRVEPNTTLKVRKTFRPLKTVVKLGADFNTQLGVWQFKSSWEDDVIGGKLTLAGRELQFSKTWLLSVGAVEDLVTRLRMRAAVDLGTMKAYARLGFRTERLSPINVVEGFTLMKRLPLDGNDGHV 295 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105033.419.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig105033.419.1 >prot_H-elongata_contig105033.419.1 ID=prot_H-elongata_contig105033.419.1|Name=mRNA_H-elongata_contig105033.419.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp MKDLFPNVRVSMDPTTSLKLRKRIYPLKTVLTLGADYNTHMGVWQFRSSWback to top mRNA from alignment at H-elongata_contig105033:530..931- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig105033.419.1 ID=mRNA_H-elongata_contig105033.419.1|Name=mRNA_H-elongata_contig105033.419.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=402bp|location=Sequence derived from alignment at H-elongata_contig105033:530..931- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig105033:530..931- >mRNA_H-elongata_contig105033.419.1 ID=mRNA_H-elongata_contig105033.419.1|Name=mRNA_H-elongata_contig105033.419.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=804bp|location=Sequence derived from alignment at H-elongata_contig105033:530..931- (Himanthalia elongata Himel1 dioecious)back to top |