mRNA_H-elongata_contig105019.417.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig105019.417.1
Unique NamemRNA_H-elongata_contig105019.417.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Match: A0A6H5KI57_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KI57_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 8.580e-91
Identity = 142/162 (87.65%), Postives = 149/162 (91.98%), Query Frame = 1
Query:    1 QEKFTRVAVAFKVGGWHDDLLVATCVLQASILLGGGDSFSAGGPGKGMYSRLYREILNKYYWAEAAEAFSMIHDEAGLLGIAGAAPDKARAGQLMHVFCEHFATLAAVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRETPEVGGRSVDR 486
            ++K TRV+VAFKVGGWHDDLLV TCVLQ  +LLGGGDSFSAGGPGKGMYSRLYRE+LN++YWAEAAEAFSMIHDE GLLGIAGAA DK RAGQLMHVFCEHFATLA VPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRETPE  G   DR
Sbjct:  371 KDKLTRVSVAFKVGGWHDDLLVPTCVLQ--VLLGGGDSFSAGGPGKGMYSRLYREVLNRFYWAEAAEAFSMIHDETGLLGIAGAAADKLRAGQLMHVFCEHFATLATVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRETPEARGLRQDR 530          
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Match: K8YT24_NANGC (Peptidase_M16_C domain-containing protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YT24_NANGC)

HSP 1 Score: 222 bits (566), Expect = 1.440e-69
Identity = 113/160 (70.62%), Postives = 126/160 (78.75%), Query Frame = 1
Query:    4 EKFTRVAVAFKVGGWHDDLLVATCVLQASILLGGGDSFSAGGPGKGMYSRLYREILNKYYWAEAAEAFSMIHDEAGLLGIAGAAPDKARAGQLMHVFCEHFATLAAVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRETPEVGGRSVD 483
            + FTRVAV F+V GWHD  LVA CV+Q  ILLGGGDSFSAGGPGKGMYSRLYRE+LN+YYW E AEAF  +H+E G+LGIAGA  + ARAGQLMH FC     LA  PV   ELSRARNMLKCNVLT LESR++LFEDIGRQM+TYG RE PE   R +D
Sbjct:  133 DPFTRVAVGFEVAGWHDKDLVAMCVMQ--ILLGGGDSFSAGGPGKGMYSRLYRELLNRYYWVEGAEAFVNLHNETGVLGIAGAC-EAARAGQLMHEFCAQICKLALTPVDPVELSRARNMLKCNVLTQLESRIILFEDIGRQMITYGHREAPEALCRKID 289          
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Match: W7TP27_9STRA (Peptidase M16 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TP27_9STRA)

HSP 1 Score: 222 bits (566), Expect = 2.580e-67
Identity = 113/160 (70.62%), Postives = 126/160 (78.75%), Query Frame = 1
Query:    4 EKFTRVAVAFKVGGWHDDLLVATCVLQASILLGGGDSFSAGGPGKGMYSRLYREILNKYYWAEAAEAFSMIHDEAGLLGIAGAAPDKARAGQLMHVFCEHFATLAAVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRETPEVGGRSVD 483
            + FTRVAV F+V GWHD  LVA CV+Q  ILLGGGDSFSAGGPGKGMYSRLYRE+LN+YYW E AEAF  +H+E G+LGIAGA  + ARAGQLMH FC     LA  PV   ELSRARNMLKCNVLT LESR++LFEDIGRQM+TYG RE PE   R +D
Sbjct:  335 DPFTRVAVGFEVAGWHDKDLVAMCVMQ--ILLGGGDSFSAGGPGKGMYSRLYRELLNRYYWVEGAEAFVNLHNETGVLGIAGAC-EAARAGQLMHEFCAQICKLALTPVDPVELSRARNMLKCNVLTQLESRIILFEDIGRQMITYGHREAPEALCRKID 491          
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Match: A0A835Z8C4_9STRA (Mitochondrial processing peptidase alpha subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8C4_9STRA)

HSP 1 Score: 211 bits (538), Expect = 4.070e-63
Identity = 114/172 (66.28%), Postives = 132/172 (76.74%), Query Frame = 1
Query:    1 QEKFTRVAVAFK--------VGGWHDDLLVATCVLQASILLGGGDSFSAGGPGKGMYSRLYREILNKYYWAEAAEAFSMIHDEAGLLGIAGAA--PDKARAGQLMHVFCEHFATLAAVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRETPEVGGRSVDR 486
            +E +TRV VAF+        VGGW     V TCVLQ  +LLGGGDSFSAGGPGKGMYSRLYRE+LN+++W E+AEAF+ +H E+GLLGIAGAA  PD   AG+LMHVF  HF+ LA  PV   ELSRA+NMLKCNVLTHLESRLVLFEDIGRQ+L+YG RETPE     +DR
Sbjct:  332 KEDWTRVCVAFEASDCAPAFVGGWDHPQFVPTCVLQ--VLLGGGDSFSAGGPGKGMYSRLYREVLNRHFWVESAEAFTSMHSESGLLGIAGAAAPPD---AGKLMHVFSNHFSKLALQPVDPVELSRAKNMLKCNVLTHLESRLVLFEDIGRQILSYGYRETPEAICEKIDR 498          
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Match: A0A7S0GKU9_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GKU9_9STRA)

HSP 1 Score: 204 bits (520), Expect = 6.950e-63
Identity = 108/162 (66.67%), Postives = 129/162 (79.63%), Query Frame = 1
Query:    4 EKFTRVAVAFKVGGWHD-DLLVATCVLQASILLGGGDSFSAGGPGKGMYSRLYREILNKYYWAEAAEAFSMIHDEAGLLGIAGAA-PDKARAGQLMHVFCEHFATLAAVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRETPEVGGRSVD 483
            E  T+VA+AF+VGGWH  DLLV TCVLQ  ILLGGG+SFSAGGPGKGMYSRLYRE+LNKYYWAE+AE+F+ +H E GL GI+G++ P+ +R   L  V  EHFA L    V DEE+ RARNMLKCNVL+ LESRLVLFEDIGRQ+LTYG+RE+ E   + +D
Sbjct:  112 EGHTKVALAFEVGGWHSGDLLVPTCVLQ--ILLGGGNSFSAGGPGKGMYSRLYREVLNKYYWAESAESFTSLHSETGLFGISGSSKPENSR--DLTRVITEHFAKLTTDLVKDEEIDRARNMLKCNVLSQLESRLVLFEDIGRQILTYGKRESVEEMCKKID 269          
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Match: A0A6U3Q142_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Q142_9STRA)

HSP 1 Score: 209 bits (533), Expect = 4.230e-62
Identity = 110/159 (69.18%), Postives = 127/159 (79.87%), Query Frame = 1
Query:   10 FTRVAVAFKVGGWHDDLLVATCVLQASILLGGGDSFSAGGPGKGMYSRLYREILNKYYWAEAAEAFSMIHDEAGLLGIAGAA-PDKARAGQLMHVFCEHFATLAAVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRETPEVGGRSVD 483
            FTRVA+AF++GGWH D LV TCVLQ   LLGGG+SFSAGGPGKGMYSRLYRE+LN+YYWAE AEAF+  H E+GLLGI+G++ P+K+R   +  V  EHF  LA   VTDEEL RARNMLKCNVLT LESRLVLFEDIGRQ+LTYG+RE      R +D
Sbjct:  376 FTRVALAFELGGWHSDDLVPTCVLQT--LLGGGNSFSAGGPGKGMYSRLYREVLNQYYWAERAEAFTSFHSESGLLGISGSSIPNKSR--DMTRVLAEHFYKLAHFYVTDEELDRARNMLKCNVLTQLESRLVLFEDIGRQILTYGKREDTASMCRKID 530          
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Match: A0A7S2SHG1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SHG1_9STRA)

HSP 1 Score: 199 bits (507), Expect = 1.150e-61
Identity = 103/160 (64.38%), Postives = 127/160 (79.38%), Query Frame = 1
Query:   10 FTRVAVAFKV-GGWHDDLLVATCVLQASILLGGGDSFSAGGPGKGMYSRLYREILNKYYWAEAAEAFSMIHDEAGLLGIAGAA-PDKARAGQLMHVFCEHFATLAAVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRETPEVGGRSVD 483
            +TR+A+AF++ GGWH D LV  CVLQ   LLGGG+SFSAGGPGKGMYSRLYRE+LN+YYWAE+AEAF+  H E+GLLG++G++ P K+R   ++ V  EHF  L +  VTDEEL RARNMLKCNVL+ LESRLVLFEDIGRQ+LTYG+RE  +     +D
Sbjct:   52 YTRIALAFEIPGGWHSDQLVTACVLQT--LLGGGNSFSAGGPGKGMYSRLYREVLNRYYWAESAEAFTTFHTESGLLGMSGSSLPTKSR--DVVRVLAEHFHKLTSEHVTDEELDRARNMLKCNVLSQLESRLVLFEDIGRQILTYGKREGTQEMCEKID 207          
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Match: A0A7S2PHG5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PHG5_9STRA)

HSP 1 Score: 199 bits (507), Expect = 6.190e-61
Identity = 105/150 (70.00%), Postives = 121/150 (80.67%), Query Frame = 1
Query:   13 TRVAVAFKV-GGWHD--DLLVATCVLQASILLGGGDSFSAGGPGKGMYSRLYREILNKYYWAEAAEAFSMIHDEAGLLGIAGAAPDKARAGQLMHVFCEHFATLAAVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRE 453
            TR+AVAF++ GGW++    LV  CVLQ  +LLGGG SFSAGGPGKGMYSRLYRE+LN+YYW EAAEAF+  H E+GLLGI GA P   ++  L  +FCEH A LA  PVTDEEL RA+NMLKCNVLT LESRLVLFEDIGRQ+LTYG+RE
Sbjct:  109 TRIAVAFELSGGWNELEGDLVPACVLQ--VLLGGGSSFSAGGPGKGMYSRLYREVLNRYYWVEAAEAFTSFHSESGLLGIKGACPG-VKSLDLTRLFCEHMAKLAMFPVTDEELDRAKNMLKCNVLTQLESRLVLFEDIGRQILTYGKRE 255          
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Match: B8BWG1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWG1_THAPS)

HSP 1 Score: 202 bits (514), Expect = 2.600e-59
Identity = 103/151 (68.21%), Postives = 122/151 (80.79%), Query Frame = 1
Query:    1 QEKFTRVAVAFKVGGWHDDLLVATCVLQASILLGGGDSFSAGGPGKGMYSRLYREILNKYYWAEAAEAFSMIHDEAGLLGIAGAAPDKARAGQLMHVFCEHFATLAAVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRE 453
            +E+FT VA+AF+VGGWH   LV  CVLQ   LLGGG SFSAGGPGKGMYSRLYRE+LN+++WAE+AEAFS  H E+GL GI+G+ P + R+G++     +HF  LA   VTDEEL RARNMLKCNVLT LESRLVLFEDIGRQ+LTYG+RE
Sbjct:  362 KEEFTFVAIAFEVGGWHSPDLVPVCVLQT--LLGGGSSFSAGGPGKGMYSRLYREVLNRFHWAESAEAFSSFHAESGLWGISGSCPAE-RSGEMTRALTDHFLKLADQLVTDEELDRARNMLKCNVLTQLESRLVLFEDIGRQILTYGKRE 509          
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Match: A0A1Z5KCX7_FISSO (Mitochondrial-processing peptidase subunit alpha n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KCX7_FISSO)

HSP 1 Score: 195 bits (496), Expect = 8.850e-57
Identity = 100/157 (63.69%), Postives = 121/157 (77.07%), Query Frame = 1
Query:   16 RVAVAFKVGGWHDDLLVATCVLQASILLGGGDSFSAGGPGKGMYSRLYREILNKYYWAEAAEAFSMIHDEAGLLGIAGAA-PDKARAGQLMHVFCEHFATLAAVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRRETPEVGGRSVD 483
            R+ V F+VGGWH D LVATCVLQ   LLGGG SFSAGGPGKGMYSRLYR +LN++ WAE+AEA++  H E+G+ GI+G+  P+ AR   ++ VF  H A LA   V+DEEL RARNMLKCNVLT LESRLVLFED+GRQ+LTYG+RE   V  + +D
Sbjct:  363 RIGVGFEVGGWHSDALVATCVLQT--LLGGGSSFSAGGPGKGMYSRLYRRVLNQFGWAESAEAYTAFHSESGIWGISGSTMPENAR--NMVQVFTHHLAQLAVNHVSDEELDRARNMLKCNVLTQLESRLVLFEDMGRQVLTYGQRENMNVTCKKID 515          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105019.417.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KI57_9PHAE8.580e-9187.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
K8YT24_NANGC1.440e-6970.63Peptidase_M16_C domain-containing protein n=2 Tax=... [more]
W7TP27_9STRA2.580e-6770.63Peptidase M16 n=2 Tax=Monodopsidaceae TaxID=425072... [more]
A0A835Z8C4_9STRA4.070e-6366.28Mitochondrial processing peptidase alpha subunit n... [more]
A0A7S0GKU9_9STRA6.950e-6366.67Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A6U3Q142_9STRA4.230e-6269.18Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2SHG1_9STRA1.150e-6164.38Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2PHG5_9STRA6.190e-6170.00Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B8BWG1_THAPS2.600e-5968.21Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A1Z5KCX7_FISSO8.850e-5763.69Mitochondrial-processing peptidase subunit alpha n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig105019contigH-elongata_contig105019:314..1803 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score283.5
Seed ortholog evalue6.3e-74
Seed eggNOG ortholog2880.D7FU77
KEGG koko:K01412
EggNOG free text desc.protein processing involved in protein targeting to mitochondrion
EggNOG OGsCOG0612@1,KOG2067@2759
EC3.4.24.64
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko03029
Hectar predicted targeting categoryother localisation
Exons4
Model size489
Cds size489
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig105019.417.1prot_H-elongata_contig105019.417.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig105019 314..1803 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929583.2293832-CDS-H-elongata_contig105019:313..4031622929583.2293832-CDS-H-elongata_contig105019:313..403Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig105019 314..403 +
1691679079.795155-CDS-H-elongata_contig105019:313..4031691679079.795155-CDS-H-elongata_contig105019:313..403Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig105019 314..403 +
1622929583.3790607-CDS-H-elongata_contig105019:585..6711622929583.3790607-CDS-H-elongata_contig105019:585..671Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig105019 586..671 +
1691679079.804317-CDS-H-elongata_contig105019:585..6711691679079.804317-CDS-H-elongata_contig105019:585..671Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig105019 586..671 +
1622929583.3942683-CDS-H-elongata_contig105019:1315..14661622929583.3942683-CDS-H-elongata_contig105019:1315..1466Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig105019 1316..1466 +
1691679079.8119256-CDS-H-elongata_contig105019:1315..14661691679079.8119256-CDS-H-elongata_contig105019:1315..1466Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig105019 1316..1466 +
1622929583.4090958-CDS-H-elongata_contig105019:1641..18031622929583.4090958-CDS-H-elongata_contig105019:1641..1803Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig105019 1642..1803 +
1691679079.8196387-CDS-H-elongata_contig105019:1641..18031691679079.8196387-CDS-H-elongata_contig105019:1641..1803Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig105019 1642..1803 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig105019.417.1

>prot_H-elongata_contig105019.417.1 ID=prot_H-elongata_contig105019.417.1|Name=mRNA_H-elongata_contig105019.417.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=163bp
QEKFTRVAVAFKVGGWHDDLLVATCVLQASILLGGGDSFSAGGPGKGMYS
RLYREILNKYYWAEAAEAFSMIHDEAGLLGIAGAAPDKARAGQLMHVFCE
HFATLAAVPVTDEELSRARNMLKCNVLTHLESRLVLFEDIGRQMLTYGRR
ETPEVGGRSVDR*
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mRNA from alignment at H-elongata_contig105019:314..1803+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig105019.417.1 ID=mRNA_H-elongata_contig105019.417.1|Name=mRNA_H-elongata_contig105019.417.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1490bp|location=Sequence derived from alignment at H-elongata_contig105019:314..1803+ (Himanthalia elongata Himel1 dioecious)
CAGGAAAAGTTTACCCGAGTGGCCGTGGCGTTCAAGGTCGGCGGATGGCA CGACGATCTGCTCGTTGCCACCTGCGTCCTCCAGGCGAGTGTATTATGAT TGAGGCACCCGCTTTTATTGCTTACCCCTGCCCGGGGGACATAACGGGGC TGTGTGATGATATATCAGACGTCCTGTTGCTTTTAGCTATTTTTTGGACA CATATGCACCAAAGGTCTTTCTCACGTGACTAATAAGCTGACGCGATCTT TCGCCCCCGACGACTCTTCCAGATTCTTCTCGGGGGCGGCGACTCCTTTT CCGCGGGGGGACCGGGCAAGGGCATGTACTCTCGGCTGTACCGGGAGATC CTCAATAAGTGAGAAATGTTGTGTTTATCGCGAGCTTGTACTCGCAGCAG CTCTTGCAAACGTTTCACTGTATTTGTAGCAAGAGAAGTACAACCCCCGC TTCCTGCAGCGAGACACGAGGAGCCTTTTGGCCCGTGTGACCAGCGTCGG CGTGGAAGGAGAAGAGACGGCGGGGGGGGGGGGTTACTCACGTTTTTGAT GGCTTAGCTGGTAGTTGTTAGGAGGCGGAATGAAGCGACCGTAGGAGAGC GCATATGAAGGGCTATTTCGTTCGGATATGTATGACGTGGGCACAGAAAA TAATATTGTTGGATTAGTGAGGGCGTTGGGGGAGAGAGGAGGCTAGTCAT GGGACAGCTCGCGGGTGGTGGTAACGCGCATCATCGCGTCGTCAGGGACT ATTGGCTAAAATAATAGCACGGCAAGGCTCTCCACGCGTCGCACGATTTG GATCTCTCGGGTGTTGCCGTGCCAAACTGTTTGCGCGCGTCGTCCGGAAT CGGGTGGGCCTCCCGCGGGAATTTTTAAAACTTGATCGGCCAAACGGTAC AAACAATCCAAGCTGGTACTCGTGTACGACATGGGGGTTTGCGGCGGTTG CATCGCGTGTCCTCTTGTTTGCGGCGGTTGCCTCGCGTGTCCTCGGGGGA AGGTATTACTGGGCAGAAGCGGCCGAGGCGTTTTCGATGATTCACGACGA GGCAGGACTGCTGGGAATTGCGGGCGCCGCGCCCGACAAGGCGCGGGCGG GGCAGCTCATGCACGTGTTCTGCGAGCACTTTGCCACACTCGCGGCTGTA CCGGTAAGGTTACGCGCGGACGGGTATTAGAGGAAAGTGACACTTCTCCT CCCGTCCCCCTGTGTCGGACGTCAATATTTTGCGGCTTGCCTCGCGTGCC CATAGACACAGAGTAGGTCCCGGTTCGGTGGAAGAACGTCGATATGCGGC ACCCCGTTGCACTTCCCGACGCTGATAGGTCACCGACGAGGAGCTCAGCC GAGCAAGGAACATGCTCAAATGCAACGTCCTCACGCACCTGGAATCCCGT CTTGTCCTGTTCGAGGACATCGGTCGACAGATGCTCACCTACGGACGGAG AGAAACCCCAGAGGTTGGTGGCCGGAGCGTGGATCGGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig105019:314..1803+

>mRNA_H-elongata_contig105019.417.1 ID=mRNA_H-elongata_contig105019.417.1|Name=mRNA_H-elongata_contig105019.417.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=978bp|location=Sequence derived from alignment at H-elongata_contig105019:314..1803+ (Himanthalia elongata Himel1 dioecious)
CAGGAAAAGTTTACCCGAGTGGCCGTGGCGTTCAAGGTCGGCGGATGGCA
CGACGATCTGCTCGTTGCCACCTGCGTCCTCCAGGCGAGTCAGGAAAAGT
TTACCCGAGTGGCCGTGGCGTTCAAGGTCGGCGGATGGCACGACGATCTG
CTCGTTGCCACCTGCGTCCTCCAGGCGAGTATTCTTCTCGGGGGCGGCGA
CTCCTTTTCCGCGGGGGGACCGGGCAAGGGCATGTACTCTCGGCTGTACC
GGGAGATCCTCAATAAATTCTTCTCGGGGGCGGCGACTCCTTTTCCGCGG
GGGGACCGGGCAAGGGCATGTACTCTCGGCTGTACCGGGAGATCCTCAAT
AAGTATTACTGGGCAGAAGCGGCCGAGGCGTTTTCGATGATTCACGACGA
GGCAGGACTGCTGGGAATTGCGGGCGCCGCGCCCGACAAGGCGCGGGCGG
GGCAGCTCATGCACGTGTTCTGCGAGCACTTTGCCACACTCGCGGCTGTA
CCGGTATTACTGGGCAGAAGCGGCCGAGGCGTTTTCGATGATTCACGACG
AGGCAGGACTGCTGGGAATTGCGGGCGCCGCGCCCGACAAGGCGCGGGCG
GGGCAGCTCATGCACGTGTTCTGCGAGCACTTTGCCACACTCGCGGCTGT
ACCGGTCACCGACGAGGAGCTCAGCCGAGCAAGGAACATGCTCAAATGCA
ACGTCCTCACGCACCTGGAATCCCGTCTTGTCCTGTTCGAGGACATCGGT
CGACAGATGCTCACCTACGGACGGAGAGAAACCCCAGAGGTTGGTGGCCG
GAGCGTGGATCGGTGAGTCACCGACGAGGAGCTCAGCCGAGCAAGGAACA
TGCTCAAATGCAACGTCCTCACGCACCTGGAATCCCGTCTTGTCCTGTTC
GAGGACATCGGTCGACAGATGCTCACCTACGGACGGAGAGAAACCCCAGA
GGTTGGTGGCCGGAGCGTGGATCGGTGA
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