mRNA_H-elongata_contig10489.410.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Match: A0A6H5L364_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L364_9PHAE) HSP 1 Score: 376 bits (965), Expect = 6.600e-123 Identity = 219/414 (52.90%), Postives = 257/414 (62.08%), Query Frame = 1
Query: 1 QLVDLSDRNLLCASVFGDEAVFGCADHALYCVDLLRGTKTRQLFRSSSKSACAGHKDWVSAVSHTPGGDIVSGGLDGKLCIWPRDNGV--------PRQVQAHSGSISAMKLDAESRVVTSDYSGALRVWDCRGDRNGWVAAPRMMREISSRSLLAPCTDFAWC--GSR--VLTGHRDGRLGFYDLETGQLLSGSSEHGTAHRGHVTATISAPDVGATGGVGSTCFVTGGHDGFVRVWDTR------RVSSCPSIAAVMESAAHRSAAGVGAVGGILAPKTGSAGGRRLISFGADKRVSM--------------------RSSLVVEHVFSSHRDFIYCMEIVPSVEGG-REGSG--ILVTGGGDGLLLVHDLCSMRLLYGLGCCSAGAVRCAIGGQDRLTIAGDDGNAMLYKF 1119
QL+DLSDRNLLC SV GDEAVFG ADH+LYCVDL RG TRQL+ S SK AGHK+WVS V HT GDI SGG+DGKLC+W R P +VQAH+GSISAMK D E R A PR+ E+S L APC DF+W G R V+TGHRDGR+GF+D ET +++G + G AHRGHVT + ++ TG GS CF TGG DGFVR+WD R R + V+E+ AHR GVGAVGG++ +GG RL SFGAD+RV + SSL +EH F HRDFIYCM+ VP G R GSG +LVTGGGDG+LLVHDL SMRLLYGLGCCSAGAVRC + ++ LT+AGDDGNAMLY F
Sbjct: 164 QLLDLSDRNLLCLSVRGDEAVFGSADHSLYCVDLSRGITTRQLYGSRSKPD-AGHKEWVSVVCHTAQGDIASGGIDGKLCLWRRGXXXXXXXXXXNPGEVQAHAGSISAMKADEEGRXXXXXXXXXXXXXXXXXXXXXXGAPPRLSGELSDGGLPAPCMDFSWSSYGRRAVVMTGHRDGRVGFFDAETSAIVAGGRKGG-AHRGHVTVVEALDNM--TGVTGS-CFATGGQDGFVRIWDPRAGEMEGRGGTSAGAGPVLEAPAHRGPEGVGAVGGLM---VAGSGGNRLASFGADRRVCVLEVRGGRSGGGDDGRRNREQSSSLAIEHAFDEHRDFIYCMDFVPVGSGAARAGSGGDVLVTGGGDGMLLVHDLDSMRLLYGLGCCSAGAVRCVVARENTLTVAGDDGNAMLYSF 569
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Match: D7G2S1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S1_ECTSI) HSP 1 Score: 355 bits (910), Expect = 1.280e-114 Identity = 213/418 (50.96%), Postives = 251/418 (60.05%), Query Frame = 1
Query: 1 QLVDLSDRNLLCASVFGDEAVFGCADHALYCVDLLRGTKTRQLFRSSSKSACAGHKDWVSAVSHTPGGDIVSGGLDGKLCIWPRDNGV------PRQVQAHSGSISAMKLDAESRVVTSDYSGALRVWDCRGDRNGWVAAPRMMREISSRSLLAPCTDFAWC--GSR--VLTGHRDGRLGFYDLETGQLLSGSSEHGTAHRGHVTATISAPDVGATGGVGSTCFVTGGHDGFVRVWD----------TRRVSSCPSIAAVMESAAHRSAAGVGAVGGILAPKTGSAGGRRLISFGADKRVSM--------------------RSSLVVEHVFSSHRDFIYCMEIVPSVEGG-REGSG--ILVTGGGDGLLLVHDLCSMRLLYGLGCCSAGAVRCAIGGQDRLTIAGDDGNAMLYKFSG 1125
QL+DLSDRNLLC SV GDEAVFG ADH+LYCVDL RG TRQL+ S SK AGH +WVS V HT GDI SGG+DGKLC+WPR P +VQAH+GSISAMK D E A PR+ E+S L APC DF+W G R V+TGHRDGR+GF+D ETG +++G + G AHRGHVT + ++ GV CF T + V + P AAVME+ AHR GVGAVGG++ ++G G RL SFGAD+RV + SSL +EHVF HRDFIYCM+ VP G R GSG +LVTGGGDG+LLVHDL SMRLLYGLGCCS GAVRCA+ ++ LT+AGDDGNAMLY F G
Sbjct: 174 QLLDLSDRNLLCLSVRGDEAVFGSADHSLYCVDLSRGITTRQLYGSRSKPD-AGHTEWVSVVCHTAQGDIASGGVDGKLCLWPRGGXXXXXXRNPGEVQAHAGSISAMKADEEXXXXXXXXXXXXXXXXXXXXXXXXXAPPRLSGELSDGGLPAPCMDFSWSSDGRRAVVMTGHRDGRVGFFDAETGAIVAGGCKGG-AHRGHVTVVEALDNMM---GVSGCCFATXXXXXXXXXXXXXXXXXXXXGSTSVGAGP--AAVMEAPAHRGPEGVGAVGGLMVARSG---GNRLASFGADRRVCVLEVRGGRSGGGDDVRRHREQSSSLAIEHVFDEHRDFIYCMDFVPVGSGAARAGSGGDVLVTGGGDGMLLVHDLDSMRLLYGLGCCSTGAVRCAVARENMLTVAGDDGNAMLYSFGG 581
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Match: A9U3F5_PHYPA (Predicted protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9U3F5_PHYPA) HSP 1 Score: 192 bits (489), Expect = 7.790e-52 Identity = 141/383 (36.81%), Postives = 195/383 (50.91%), Query Frame = 1
Query: 1 QLVDLSDRNLLCASVFGDEAVFGCADHALYCVDLLRGTKTRQLFRSSSKSACAGHKDWVSAVSHTPGGDIVSGGLDGKLCIWPRDNGVPRQVQAHSGSISAMKLDAE-SRVVTSDYSGALRVWDCRGDRNGWVAAPRMMREISSRSLLAPCTDFAWCGS-RVLTGHRDGRLGFYDL-ETGQLLSGSSEHGTAHRGHVTATISAPDV-GATGGVGSTCFVTGGHDGFVRVWDTRRVSSCPSIAAVMESAAHRSAAGVGAVGGILAPKTGSAGGRRLISFGADKRVSM---RSSLVVEHVFSSHRDFIYCMEIVPSVEGGREGSGILV-TGGGDGLLLVHDLCSMRLLYGLGCCSAGAVRC-AIGGQDRLTIAGDDGNAMLYKFS 1122
QLV++SDR LC SV G+EA G +DHALY VD + T R L+ GH +WV+ + G I+SGG+DGKLC+W ++ + H SISA++ AE S +++ Y L +W+ + A + AP F +++G RDG + +D LL SS AH+GHVTA D T ++TGG DG +R WD R + P +AV+ HR+A GAV I T G +++ GAD + + R H +HRDFIY + + +G LV +G GDG LLVH+L + + LYGLG S GAVRC ++ G DRL +AGDDGN M+YK S
Sbjct: 318 QLVNVSDRPSLCMSVRGNEACIGSSDHALYIVDCEKCTLKRSLYGKQY-----GHTEWVTCCDYLKDGRILSGGMDGKLCLWDKNGIRTIDLLGHMASISAVRSGAEGSLAISASYDKTLMLWNVNRSQTKNAAC--------LKGHKAPVLGFCLSSQGAIVSGSRDGDVILWDTAHATPLLHVSS----AHKGHVTAVECLEDTKNKTWEECREMYLTGGQDGILRAWDFR--TRGPVHSAVL----HRNAVTKGAVNSIAVSYTACGSGPIVVTAGADNSMKVLEPRMGFKALHTICTHRDFIYSLYV----------AGPLVWSGSGDGSLLVHELLTGQCLYGLGADSKGAVRCISLAGPDRLVVAGDDGNVMIYKVS 667
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Match: A0A5B8MJ88_9CHLO (WD40 repeat domain-containing protein n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MJ88_9CHLO) HSP 1 Score: 172 bits (436), Expect = 1.080e-45 Identity = 128/377 (33.95%), Postives = 190/377 (50.40%), Query Frame = 1
Query: 7 VDLSDRNLLCASVFGDEAVFGCADHALYCVDLLRGTKTRQLFRSSSKSACAGHKDWVSAVSHTPGGDIVSGGLDGKLCIWPRDNGVPRQVQAHSGSISAMKLDAESRVVTS-DYSGALRVWDCRGDRNGWVAAPRMMREISS-RSLLAPCTDFAWCGSRVLTGHRDGRLGFYDLETGQLLSGSSEHGTAHRGHVTATISAPDVGATGGVGSTCFVTGGHDGFVRVWDTRRVSSCPSIAAVMESAAHRSAAGVGAVGGILAPKTGSAGGRRLISFGADKRVSM---RSSLVVEHVFSSHRDFIYCMEIVPSVEGGREGSGILVTGGGDGLLLVHDLCSMRLLYGLGCCSAGAVRCAIGGQDRLTIAGDDGNAMLYKFS 1122
+DLSDR LC V D AV G +DHALY V+ +G +TR+L+ S GH +WV+AV + P G ++S GLD KL +W +++ HS S+S +++ + V S Y ++ WD G NG RE S R AP + AW +++G RDG L +D+ G+ G AH+GH+TA + G ++GG DG ++V D +R+ C + E HR G GA+G I G+ +++ GADKR+ + R S SS++DFIY ME++ ++++G GDG +LVHD+ + LYGL + AVR D L +GDDGN + Y +
Sbjct: 140 IDLSDRPSLCMDVRNDCAVIGSSDHALYEVNFRKGKRTRKLY-----SKAYGHCEWVNAVKYFPDGKVLSAGLDSKLLLWHSSAVRATELKGHSHSVSGIQVSPDGGVACSCSYDKTVKFWDISG-LNG--------RESQSLRGHKAPVMEMAWRDHTLVSGSRDGALILWDVLKGKPKKAV---GAAHQGHITA------LALFDGRDDNLVLSGGQDGCLQVRD-QRLQDC-----LFEKYHHRRDGGAGAIGAIRCTADGN-----VVTMGADKRICISDPRMSFEKVGAISSNKDFIYSMELMGD---------LVISGSGDGQVLVHDMRTGSCLYGLEG-NQNAVRSLGVTDDFLVASGDDGNVISYPMA 472
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Match: A0A7S3BQX7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BQX7_9EUKA) HSP 1 Score: 171 bits (434), Expect = 8.450e-45 Identity = 128/376 (34.04%), Postives = 186/376 (49.47%), Query Frame = 1
Query: 16 SDRNLLCASVFGDEAVFGCADHALYCVDLLRGTKTRQLFRSSSKSACAGHKDWVSAVSHTPGGDIVSGGLDGKLCIWPRDNGVPR--QVQAHSGSISAMKLDAE-SRVVTSDYSGALRVWDCRGDRNGWVAAPRMMREISSRSLLAPCTDFAWCGSRVLTGHRDGRLGFYDLETGQLLSGSSEHGTAHRGHVTATISAPDVGATGGVGSTCFVTGGHDGFVRVWDTRRVSSCPSIAAVMESAAHRSAAGVGAVGGILAPKTGSAGGRRLISFGADKRVSM---RSSLVVEHVFSSHRDFIYCMEIVPSVEGGREGSGILVTGGGDGLLLVHDLCSMRLLYGLGCCSAGAVRCAIGGQDRLTIAGDDGNAMLYKFSG 1125
S+R LLC SV GD A+ G +DH L DL RG R + + GH +WV+ V+H P G +VS G+D KLC+W G PR + H+GS+S +++ A+ S +++ Y LRVW V R+ AP AW + + R+G++ +D +G+ S H GH T+ ++A G+ GGV ++GG DG V++WD R+ C ++S H GAV I+ + G L+S GAD+ V + R F+ HRD +Y + GR +++GGGDG+LL+HDL L YGLG + AVRC D+L AGDDG + Y+F G
Sbjct: 109 SERPLLCMSVLGDAAIVGSSDHGLVEFDL-RGAGGELRRRRTLYTKTYGHTEWVTDVAHAPDGRVVSAGMDSKLCLW-NATGAPRCKDLLGHTGSVSRVEVSADGSLALSASYDKTLRVWSLDAGAERGVL----------RAHKAPVLHVAWAADVLASADREGQVIMWDPSSGRATQLGS-----HGGHATSLVAAR--GSAGGV-----LSGGQDGVVKLWDARQ-GGC-----ALQSRVHE-----GAVNDIIDHPLPN-GQSMLLSSGADRTVVVMDPRKGYEALFRFTDHRDHVYSLSAF-----GR----YVISGGGDGMLLLHDLAHGTLCYGLGA-NQNAVRCIKPDVDKLVCAGDDGTLISYEFGG 438
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Match: G0TWV6_TRYVY (Uncharacterized protein n=1 Tax=Trypanosoma vivax (strain Y486) TaxID=1055687 RepID=G0TWV6_TRYVY) HSP 1 Score: 162 bits (410), Expect = 5.330e-42 Identity = 126/381 (33.07%), Postives = 185/381 (48.56%), Query Frame = 1
Query: 10 DLSDRNLLCASVFG--DEAVFGCADHALYCVDLLRGTKTRQLFRSSSKSACAGHKDWVSAVSH-TPGGDIVSGGLDGKLCIWPRDNGVPR--QVQAHSGSISAMKLDAESRV-VTSDYSGALRVWDCRGDRNGWVAAPRMMREISSRSLLAPCTDFAWCGSRVLTGHRDGRLGFYDLETGQLLSGSSEHGTAHRGHVTAT--ISAPDVGATGGVGSTCFVTGGHDGFVRVWDTRRVSSCPSIAAVMESAAHRSAAGVGAVGGILAPKTGSAGGRRLISFGADKRVSM---RSSLVVEHVFSSHRDFIYCMEIVPSVEGGREGSGILVTGGGDGLLLVHDLCSMRLLYGLGCCSAGAVRCAIGGQDRLTIAGDDGNAMLYKF 1119
D SDRNLLC V + V G ADH L D+ G + + L+ GH +WV+ + G I+SGG+D KLC+W G R + H+GSIS ++++ S++ ++S Y LR+WDC AA R + + AP F+WCG+++L+G R G +D+E G L+ + RG +++ + + DVG +G G + V D R S P + A H GA+ GI + S LI+ GADK + + R+ H F+ HRDFIY +E ++++GG +G LLVHD+ YGLG +A AVRC ++ L AGDDG AM+Y F
Sbjct: 132 DASDRNLLCMDVHAASKQCVVGSADHGLKVFDITSGKEKKNLYTKKY-----GHTEWVTCCKYFQSNGKIISGGMDSKLCLWEA-TGPARCTDLMGHTGSISHVEVNCASQLALSSSYDRTLRLWDC-------AAAGRCIATFAGHK--APVMMFSWCGAQLLSGDRQGTAKVWDIERGSCLATMA----TKRGQISSLWHLLSSDVGLLSAIGD-------QGGVLCVMDFLRTGSKP----IFSDALHPG----GAITGIRSVDESS----YLITAGADKVILVLDPRAGFKTLHRFTDHRDFIYSLETFGP---------LVLSGGANGWLLVHDVIEGNCCYGLGANTA-AVRCIHPMREHLVAAGDDGKAMVYDF 464
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Match: E1ZQB7_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZQB7_CHLVA) HSP 1 Score: 157 bits (398), Expect = 6.330e-41 Identity = 129/383 (33.68%), Postives = 181/383 (47.26%), Query Frame = 1
Query: 16 SDRNLLCASVFGD--EAVFGCADHALYCVDLLRGTKTRQLFRSSSKSACAGHKDWVSAVSHTPGGDIVSGGLDGKLCIWPRDNGVPRQVQAHSGSISAMK----LDAESRVVTSDYSGALRVWDCRGDRNGWVAAPRMMREISSRSLLAPCTDFAWCGSRVLTGHRDGRLGFYDLETGQLLSGSSEHGTAHRGHVTATISAPDVGATGGVGS------TCFVTGGHDGFVRVWDTRRVSSCPSIAAVMESAAHRSAAGVGAVGGILAPKTGSAGGRRLISFGADKRV-SMRSSLVVEHVFSSHR-DFIYCMEIVPSVEGGREGSGILVTGGGDGLLLVHDLCSMRLLYGLGCCSAGAVRCAIGGQDRLTIAGDDGNAMLYKFS 1122
+DRNLLCASV + EAVFG ADHA Y VDL R K R L + AGH++WV+AV H PGG I SGGLD +C+WP ++++ H+G IS ++ A + V++ Y L W C G G +++ AP G +G RDG L +DL G + G + AH H TA ++ VG++GG ++GG DG VR+WD R V + AAH AG GAVG + A + +++ GAD+ V + + +E V+S DF Y R S +L+ G GDG ++ + + L SA AVR G DDG+AM+Y +
Sbjct: 38 ADRNLLCASVDWERHEAVFGSADHACYTVDLRRLKKARTLLGKT-----AGHREWVAAVCHLPGGRIASGGLDASICVWPAAGAACQRIKGHAGPISQLEPVPAAGAAAAFVSASYDKRLITWCCPGGSGGKARHQQVLA-----GHRAPVLQLQVAGGCAASGDRDGALLRWDLAAGAAVGGPLQ---AHTEHCTA-LAWWHVGSSGGSADEISSRGNLLLSGGQDGCVRLWDFRAGRQ------VAQQAAHAGPAGKGAVGSMSAGPPSAP--NLVVTAGADRAVRGLEARRNLEPVWSQELPDFPYSQA--------RSTSAVLL-GCGDGTVVALEAADGSRRFALAA-SASAVRTLHAGPTCFVAGCDDGSAMVYSLT 388
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Match: A0A067BWT5_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BWT5_SAPPC) HSP 1 Score: 157 bits (397), Expect = 3.330e-40 Identity = 124/380 (32.63%), Postives = 180/380 (47.37%), Query Frame = 1
Query: 13 LSDRNLLCASVF--GDEAVFGCADHALYCVDLLRGTKTRQLFRSSSKSACAGHKDWVSAVSHTPGGDIVSGGLDGKLCIWPRDNGVPRQVQ---AHSGSISAMKLDAESRVVTSDYSGALRVWDCR-GDRNGWVAAPRMMREISSRSLLAPCTDFAWCGSRVLTGHRDGRLGFYDLETGQLLSGSSEHGTAHRGHVTATIS---APDVGATGGVGSTCFVTGGHDGFVRVWDTRRVSSCPSIAAVMESAAHRSAAGVGAVGGILAPKTGSAGGRRLISFGADKRVSMRSSLV--VEHVFSSHRDFIYCMEIVPSVEGGREGSGILVTGGGDGLLLVHDLCSMRLLYGLGCCSAGAVRCAIGGQDRLTIAGDDGNAMLYKF 1119
+S + L C S+ G EAV G DHALY + L + R+ C GHK+WV+AV+H G +VS G+D KLC+W DNG + + H+GSIS ++ +V++ Y R+WD G R G R + R AP D + GSR++ G R G + +DL + L + AH GH T+ + A DV +GG DG V+ WD R +S ++ H G GAV + + L++ GAD +V + + + + F SH+ FIY + + + +G GDG+LLVHDL + L YGLG A AVR + + L AGDDG ++Y F
Sbjct: 115 VSSQPLTCMSLAPDGSEAVVGSCDHALYTIPLRSSGSKKARGRTLYTKTC-GHKEWVTAVAHLADGRVVSAGMDSKLCLW--DNGAVARCEDLTGHAGSISLVQTIGNDWIVSASYDKTYRLWDATPGRRAGKNGRERHVL----RGHDAPILDCSLWGSRLVGGDRSGSVLVFDLASYGL---EKKWKAAHDGHCTSVLGSVFAHDVA----------YSGGQDGVVQRWDLRTKASTLALPV------HSGKTGKGAVSFLREQPSNQ---HVLVTGGADGKVHVLDTRLNALRSTFDSHQTFIYSLHVAHD---------LCFSGSGDGMLLVHDLATDTLCYGLGANQA-AVRAIVTTPNELVAAGDDGCVLVYSF 455
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Match: A0A024U4F3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4F3_9STRA) HSP 1 Score: 157 bits (397), Expect = 3.770e-40 Identity = 128/383 (33.42%), Postives = 184/383 (48.04%), Query Frame = 1
Query: 13 LSDRNLLCASVFGD--EAVFGCADHALYCVDLLR--------GTKTRQLFRSSSKSACAGHKDWVSAVSHTPGGDIVSGGLDGKLCIWPRDNGVPRQVQAHSGSISAMKLDAESRVVTSDYSGALRVWDCRGDRNGWVAAPRMMREISSRSLLAPCTDFAWCGSRVLTGHRDGRLGFYDLETGQLLSGSSEHGTAHRGHVTATISAPDVGATGGVGSTCFVTGGHDGFVRVWDTRRVSSCPSIAAVMESAAHRSAAGVGAVGGILAPKTGSAGGRRLISFGADKRVSM---RSSLVVEHVFSSHRDFIYCMEIVPSVEGGREGSGILVTGGGDGLLLVHDLCSMRLLYGLGCCSAGAVRCAIGGQDRLTIAGDDGNAMLYKFS 1122
+S + L C S+ D E V G DHALY + L + G+ R L+ S AGH +WV+AV+H P G +VSGG+D KLC+W +N + H+GSIS ++ E+ +V++ Y R+WD G AA + AP DF+ G+R++ G R+G + +DL + + H GH TA + + S +GG DG +R+WD R S AVM+ + H S G GAV I K S +++ GAD +V + R+S V FS H FIY + + + +G G G+LLVHDL + L YGLG A AVR L AGDDG ++Y+ +
Sbjct: 120 VSSQPLTCMSLAPDMTEVVVGSCDHALYAIPLQQRKASKGKNGSGVRTLY-----SKTAGHGEWVTAVAHMPDGRVVSGGMDSKLCLWDSNNRC-EDLTGHAGSISLIRPFTENWIVSASYDKTYRLWD---GAPGKRAAKAGRERHCLKGHDAPILDFSLWGNRLIGGDRNGSVLVFDLAQHAVERKAKG---VHIGHCTAVLGSQH-------NSDHAFSGGQDGLLRMWDAR------SKDAVMKVSVHVSQRGTGAVSFI---KDVSTMDHVIVTGGADGKVQVVDVRASNV-RSTFSQHTTFIYSVHVDHE---------LCFSGSGSGMLLVHDLRTDALQYGLGANQA-AVRAIATTATTLAAAGDDGGVLVYEMT 463
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Match: L1IK44_GUITC (CAP-Gly domain-containing protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1IK44_GUITC) HSP 1 Score: 157 bits (397), Expect = 5.470e-40 Identity = 122/368 (33.15%), Postives = 175/368 (47.55%), Query Frame = 1
Query: 4 LVDLSDRNLLCASVFGDEAVFGCADHALYCVDLLRGTKTRQLFRSSSKSACAGHKDWVSAVSHTPGGDIVSGGLDGKLCIWPRDNGVPRQVQAHSGSISAMKL----DAESRVVTSDYSGALRVWDCRGDRNGWVAAPRMMREISSRSLLAPCTDFAWCG------SRVLTGHRDGRLGFYDLETGQLLSGSSEHGTAHRGHVTATISAPDVGATGGVGSTCFVTGGHDGFVRVWDTRRVSSCPSIAAVMESAAHRSAAGVGAVGGILAPKTG-SAGGRRLISFGADKRVSM---RSSLVVEHVFSSHR----DFIYCMEIVPSVEGGREGSGILVTGGGDGLLLVHDLCSMRLLYGLGCCSAGAVRC 1053
L+DLSDR C SV+G EAV G DHALY +DL++ K+R L+ + GH +WV+ VSHT G ++SGG+DGKLC+W + +Q HS SIS MK + TS Y + VWD + +A+ + S C S +++G RDG +D+E + S H GH+T+ + F+ G DG V+VWD R IAA H + G GAVG I+ +T + +++ GAD RV + RS F+ H+ DFIY + + S I+++G GDG+LL HD+ + + +GLG A AVRC
Sbjct: 134 LLDLSDRPNTCISVWGGEAVIGSTDHALYGIDLVKQRKSRTLYTKTH-----GHTEWVTCVSHTADGRVLSGGMDGKLCLWNKAGAQCSDLQGHSASISDMKAVQSDGGGNFAFTSSYDKTVCVWDLSKHASRALAS-----SLKGHSAPVLCMAVVRASEEEAETSSLVSGDRDGVAMLWDVEANK-----SRRIPGHGGHITSLA---------WLDGNTFLVGAQDGKVKVWDVREERFIHQIAA------HVTQQGSGAVGNIVVRRTSPNMATTDVVTAGADCRVQVLDARSGFQPRFTFTEHKFNLEDFIYSLAMAGS---------IILSGAGDGMLLAHDVETGAVCWGLGANKA-AVRC 461 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10489.410.1 >prot_H-elongata_contig10489.410.1 ID=prot_H-elongata_contig10489.410.1|Name=mRNA_H-elongata_contig10489.410.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=376bp QLVDLSDRNLLCASVFGDEAVFGCADHALYCVDLLRGTKTRQLFRSSSKSback to top mRNA from alignment at H-elongata_contig10489:7245..8468- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10489.410.1 ID=mRNA_H-elongata_contig10489.410.1|Name=mRNA_H-elongata_contig10489.410.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1224bp|location=Sequence derived from alignment at H-elongata_contig10489:7245..8468- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10489:7245..8468- >mRNA_H-elongata_contig10489.410.1 ID=mRNA_H-elongata_contig10489.410.1|Name=mRNA_H-elongata_contig10489.410.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2256bp|location=Sequence derived from alignment at H-elongata_contig10489:7245..8468- (Himanthalia elongata Himel1 dioecious)back to top |