mRNA_H-elongata_contig10489.410.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig10489.410.1
Unique NamemRNA_H-elongata_contig10489.410.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Match: A0A6H5L364_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L364_9PHAE)

HSP 1 Score: 376 bits (965), Expect = 6.600e-123
Identity = 219/414 (52.90%), Postives = 257/414 (62.08%), Query Frame = 1
Query:    1 QLVDLSDRNLLCASVFGDEAVFGCADHALYCVDLLRGTKTRQLFRSSSKSACAGHKDWVSAVSHTPGGDIVSGGLDGKLCIWPRDNGV--------PRQVQAHSGSISAMKLDAESRVVTSDYSGALRVWDCRGDRNGWVAAPRMMREISSRSLLAPCTDFAWC--GSR--VLTGHRDGRLGFYDLETGQLLSGSSEHGTAHRGHVTATISAPDVGATGGVGSTCFVTGGHDGFVRVWDTR------RVSSCPSIAAVMESAAHRSAAGVGAVGGILAPKTGSAGGRRLISFGADKRVSM--------------------RSSLVVEHVFSSHRDFIYCMEIVPSVEGG-REGSG--ILVTGGGDGLLLVHDLCSMRLLYGLGCCSAGAVRCAIGGQDRLTIAGDDGNAMLYKF 1119
            QL+DLSDRNLLC SV GDEAVFG ADH+LYCVDL RG  TRQL+ S SK   AGHK+WVS V HT  GDI SGG+DGKLC+W R            P +VQAH+GSISAMK D E R                       A PR+  E+S   L APC DF+W   G R  V+TGHRDGR+GF+D ET  +++G  + G AHRGHVT   +  ++  TG  GS CF TGG DGFVR+WD R      R  +      V+E+ AHR   GVGAVGG++      +GG RL SFGAD+RV +                     SSL +EH F  HRDFIYCM+ VP   G  R GSG  +LVTGGGDG+LLVHDL SMRLLYGLGCCSAGAVRC +  ++ LT+AGDDGNAMLY F
Sbjct:  164 QLLDLSDRNLLCLSVRGDEAVFGSADHSLYCVDLSRGITTRQLYGSRSKPD-AGHKEWVSVVCHTAQGDIASGGIDGKLCLWRRGXXXXXXXXXXNPGEVQAHAGSISAMKADEEGRXXXXXXXXXXXXXXXXXXXXXXGAPPRLSGELSDGGLPAPCMDFSWSSYGRRAVVMTGHRDGRVGFFDAETSAIVAGGRKGG-AHRGHVTVVEALDNM--TGVTGS-CFATGGQDGFVRIWDPRAGEMEGRGGTSAGAGPVLEAPAHRGPEGVGAVGGLM---VAGSGGNRLASFGADRRVCVLEVRGGRSGGGDDGRRNREQSSSLAIEHAFDEHRDFIYCMDFVPVGSGAARAGSGGDVLVTGGGDGMLLVHDLDSMRLLYGLGCCSAGAVRCVVARENTLTVAGDDGNAMLYSF 569          
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Match: D7G2S1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S1_ECTSI)

HSP 1 Score: 355 bits (910), Expect = 1.280e-114
Identity = 213/418 (50.96%), Postives = 251/418 (60.05%), Query Frame = 1
Query:    1 QLVDLSDRNLLCASVFGDEAVFGCADHALYCVDLLRGTKTRQLFRSSSKSACAGHKDWVSAVSHTPGGDIVSGGLDGKLCIWPRDNGV------PRQVQAHSGSISAMKLDAESRVVTSDYSGALRVWDCRGDRNGWVAAPRMMREISSRSLLAPCTDFAWC--GSR--VLTGHRDGRLGFYDLETGQLLSGSSEHGTAHRGHVTATISAPDVGATGGVGSTCFVTGGHDGFVRVWD----------TRRVSSCPSIAAVMESAAHRSAAGVGAVGGILAPKTGSAGGRRLISFGADKRVSM--------------------RSSLVVEHVFSSHRDFIYCMEIVPSVEGG-REGSG--ILVTGGGDGLLLVHDLCSMRLLYGLGCCSAGAVRCAIGGQDRLTIAGDDGNAMLYKFSG 1125
            QL+DLSDRNLLC SV GDEAVFG ADH+LYCVDL RG  TRQL+ S SK   AGH +WVS V HT  GDI SGG+DGKLC+WPR          P +VQAH+GSISAMK D E                         A PR+  E+S   L APC DF+W   G R  V+TGHRDGR+GF+D ETG +++G  + G AHRGHVT   +  ++    GV   CF T                     +  V + P  AAVME+ AHR   GVGAVGG++  ++G   G RL SFGAD+RV +                     SSL +EHVF  HRDFIYCM+ VP   G  R GSG  +LVTGGGDG+LLVHDL SMRLLYGLGCCS GAVRCA+  ++ LT+AGDDGNAMLY F G
Sbjct:  174 QLLDLSDRNLLCLSVRGDEAVFGSADHSLYCVDLSRGITTRQLYGSRSKPD-AGHTEWVSVVCHTAQGDIASGGVDGKLCLWPRGGXXXXXXRNPGEVQAHAGSISAMKADEEXXXXXXXXXXXXXXXXXXXXXXXXXAPPRLSGELSDGGLPAPCMDFSWSSDGRRAVVMTGHRDGRVGFFDAETGAIVAGGCKGG-AHRGHVTVVEALDNMM---GVSGCCFATXXXXXXXXXXXXXXXXXXXXGSTSVGAGP--AAVMEAPAHRGPEGVGAVGGLMVARSG---GNRLASFGADRRVCVLEVRGGRSGGGDDVRRHREQSSSLAIEHVFDEHRDFIYCMDFVPVGSGAARAGSGGDVLVTGGGDGMLLVHDLDSMRLLYGLGCCSTGAVRCAVARENMLTVAGDDGNAMLYSFGG 581          
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Match: A9U3F5_PHYPA (Predicted protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9U3F5_PHYPA)

HSP 1 Score: 192 bits (489), Expect = 7.790e-52
Identity = 141/383 (36.81%), Postives = 195/383 (50.91%), Query Frame = 1
Query:    1 QLVDLSDRNLLCASVFGDEAVFGCADHALYCVDLLRGTKTRQLFRSSSKSACAGHKDWVSAVSHTPGGDIVSGGLDGKLCIWPRDNGVPRQVQAHSGSISAMKLDAE-SRVVTSDYSGALRVWDCRGDRNGWVAAPRMMREISSRSLLAPCTDFAWCGS-RVLTGHRDGRLGFYDL-ETGQLLSGSSEHGTAHRGHVTATISAPDV-GATGGVGSTCFVTGGHDGFVRVWDTRRVSSCPSIAAVMESAAHRSAAGVGAVGGILAPKTGSAGGRRLISFGADKRVSM---RSSLVVEHVFSSHRDFIYCMEIVPSVEGGREGSGILV-TGGGDGLLLVHDLCSMRLLYGLGCCSAGAVRC-AIGGQDRLTIAGDDGNAMLYKFS 1122
            QLV++SDR  LC SV G+EA  G +DHALY VD  + T  R L+         GH +WV+   +   G I+SGG+DGKLC+W ++      +  H  SISA++  AE S  +++ Y   L +W+    +    A          +   AP   F       +++G RDG +  +D      LL  SS    AH+GHVTA     D    T       ++TGG DG +R WD R  +  P  +AV+    HR+A   GAV  I    T    G  +++ GAD  + +   R      H   +HRDFIY + +          +G LV +G GDG LLVH+L + + LYGLG  S GAVRC ++ G DRL +AGDDGN M+YK S
Sbjct:  318 QLVNVSDRPSLCMSVRGNEACIGSSDHALYIVDCEKCTLKRSLYGKQY-----GHTEWVTCCDYLKDGRILSGGMDGKLCLWDKNGIRTIDLLGHMASISAVRSGAEGSLAISASYDKTLMLWNVNRSQTKNAAC--------LKGHKAPVLGFCLSSQGAIVSGSRDGDVILWDTAHATPLLHVSS----AHKGHVTAVECLEDTKNKTWEECREMYLTGGQDGILRAWDFR--TRGPVHSAVL----HRNAVTKGAVNSIAVSYTACGSGPIVVTAGADNSMKVLEPRMGFKALHTICTHRDFIYSLYV----------AGPLVWSGSGDGSLLVHELLTGQCLYGLGADSKGAVRCISLAGPDRLVVAGDDGNVMIYKVS 667          
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Match: A0A5B8MJ88_9CHLO (WD40 repeat domain-containing protein n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MJ88_9CHLO)

HSP 1 Score: 172 bits (436), Expect = 1.080e-45
Identity = 128/377 (33.95%), Postives = 190/377 (50.40%), Query Frame = 1
Query:    7 VDLSDRNLLCASVFGDEAVFGCADHALYCVDLLRGTKTRQLFRSSSKSACAGHKDWVSAVSHTPGGDIVSGGLDGKLCIWPRDNGVPRQVQAHSGSISAMKLDAESRVVTS-DYSGALRVWDCRGDRNGWVAAPRMMREISS-RSLLAPCTDFAWCGSRVLTGHRDGRLGFYDLETGQLLSGSSEHGTAHRGHVTATISAPDVGATGGVGSTCFVTGGHDGFVRVWDTRRVSSCPSIAAVMESAAHRSAAGVGAVGGILAPKTGSAGGRRLISFGADKRVSM---RSSLVVEHVFSSHRDFIYCMEIVPSVEGGREGSGILVTGGGDGLLLVHDLCSMRLLYGLGCCSAGAVRCAIGGQDRLTIAGDDGNAMLYKFS 1122
            +DLSDR  LC  V  D AV G +DHALY V+  +G +TR+L+     S   GH +WV+AV + P G ++S GLD KL +W        +++ HS S+S +++  +  V  S  Y   ++ WD  G  NG        RE  S R   AP  + AW    +++G RDG L  +D+  G+        G AH+GH+TA      +    G      ++GG DG ++V D +R+  C     + E   HR   G GA+G I     G+     +++ GADKR+ +   R S       SS++DFIY ME++           ++++G GDG +LVHD+ +   LYGL   +  AVR      D L  +GDDGN + Y  +
Sbjct:  140 IDLSDRPSLCMDVRNDCAVIGSSDHALYEVNFRKGKRTRKLY-----SKAYGHCEWVNAVKYFPDGKVLSAGLDSKLLLWHSSAVRATELKGHSHSVSGIQVSPDGGVACSCSYDKTVKFWDISG-LNG--------RESQSLRGHKAPVMEMAWRDHTLVSGSRDGALILWDVLKGKPKKAV---GAAHQGHITA------LALFDGRDDNLVLSGGQDGCLQVRD-QRLQDC-----LFEKYHHRRDGGAGAIGAIRCTADGN-----VVTMGADKRICISDPRMSFEKVGAISSNKDFIYSMELMGD---------LVISGSGDGQVLVHDMRTGSCLYGLEG-NQNAVRSLGVTDDFLVASGDDGNVISYPMA 472          
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Match: A0A7S3BQX7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BQX7_9EUKA)

HSP 1 Score: 171 bits (434), Expect = 8.450e-45
Identity = 128/376 (34.04%), Postives = 186/376 (49.47%), Query Frame = 1
Query:   16 SDRNLLCASVFGDEAVFGCADHALYCVDLLRGTKTRQLFRSSSKSACAGHKDWVSAVSHTPGGDIVSGGLDGKLCIWPRDNGVPR--QVQAHSGSISAMKLDAE-SRVVTSDYSGALRVWDCRGDRNGWVAAPRMMREISSRSLLAPCTDFAWCGSRVLTGHRDGRLGFYDLETGQLLSGSSEHGTAHRGHVTATISAPDVGATGGVGSTCFVTGGHDGFVRVWDTRRVSSCPSIAAVMESAAHRSAAGVGAVGGILAPKTGSAGGRRLISFGADKRVSM---RSSLVVEHVFSSHRDFIYCMEIVPSVEGGREGSGILVTGGGDGLLLVHDLCSMRLLYGLGCCSAGAVRCAIGGQDRLTIAGDDGNAMLYKFSG 1125
            S+R LLC SV GD A+ G +DH L   DL RG       R +  +   GH +WV+ V+H P G +VS G+D KLC+W    G PR   +  H+GS+S +++ A+ S  +++ Y   LRVW         V           R+  AP    AW    + +  R+G++  +D  +G+     S     H GH T+ ++A   G+ GGV     ++GG DG V++WD R+   C      ++S  H      GAV  I+     + G   L+S GAD+ V +   R        F+ HRD +Y +        GR     +++GGGDG+LL+HDL    L YGLG  +  AVRC     D+L  AGDDG  + Y+F G
Sbjct:  109 SERPLLCMSVLGDAAIVGSSDHGLVEFDL-RGAGGELRRRRTLYTKTYGHTEWVTDVAHAPDGRVVSAGMDSKLCLW-NATGAPRCKDLLGHTGSVSRVEVSADGSLALSASYDKTLRVWSLDAGAERGVL----------RAHKAPVLHVAWAADVLASADREGQVIMWDPSSGRATQLGS-----HGGHATSLVAAR--GSAGGV-----LSGGQDGVVKLWDARQ-GGC-----ALQSRVHE-----GAVNDIIDHPLPN-GQSMLLSSGADRTVVVMDPRKGYEALFRFTDHRDHVYSLSAF-----GR----YVISGGGDGMLLLHDLAHGTLCYGLGA-NQNAVRCIKPDVDKLVCAGDDGTLISYEFGG 438          
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Match: G0TWV6_TRYVY (Uncharacterized protein n=1 Tax=Trypanosoma vivax (strain Y486) TaxID=1055687 RepID=G0TWV6_TRYVY)

HSP 1 Score: 162 bits (410), Expect = 5.330e-42
Identity = 126/381 (33.07%), Postives = 185/381 (48.56%), Query Frame = 1
Query:   10 DLSDRNLLCASVFG--DEAVFGCADHALYCVDLLRGTKTRQLFRSSSKSACAGHKDWVSAVSH-TPGGDIVSGGLDGKLCIWPRDNGVPR--QVQAHSGSISAMKLDAESRV-VTSDYSGALRVWDCRGDRNGWVAAPRMMREISSRSLLAPCTDFAWCGSRVLTGHRDGRLGFYDLETGQLLSGSSEHGTAHRGHVTAT--ISAPDVGATGGVGSTCFVTGGHDGFVRVWDTRRVSSCPSIAAVMESAAHRSAAGVGAVGGILAPKTGSAGGRRLISFGADKRVSM---RSSLVVEHVFSSHRDFIYCMEIVPSVEGGREGSGILVTGGGDGLLLVHDLCSMRLLYGLGCCSAGAVRCAIGGQDRLTIAGDDGNAMLYKF 1119
            D SDRNLLC  V     + V G ADH L   D+  G + + L+         GH +WV+   +    G I+SGG+D KLC+W    G  R   +  H+GSIS ++++  S++ ++S Y   LR+WDC        AA R +   +     AP   F+WCG+++L+G R G    +D+E G  L+  +      RG +++   + + DVG    +G          G + V D  R  S P    +   A H      GA+ GI +    S     LI+ GADK + +   R+     H F+ HRDFIY +E             ++++GG +G LLVHD+      YGLG  +A AVRC    ++ L  AGDDG AM+Y F
Sbjct:  132 DASDRNLLCMDVHAASKQCVVGSADHGLKVFDITSGKEKKNLYTKKY-----GHTEWVTCCKYFQSNGKIISGGMDSKLCLWEA-TGPARCTDLMGHTGSISHVEVNCASQLALSSSYDRTLRLWDC-------AAAGRCIATFAGHK--APVMMFSWCGAQLLSGDRQGTAKVWDIERGSCLATMA----TKRGQISSLWHLLSSDVGLLSAIGD-------QGGVLCVMDFLRTGSKP----IFSDALHPG----GAITGIRSVDESS----YLITAGADKVILVLDPRAGFKTLHRFTDHRDFIYSLETFGP---------LVLSGGANGWLLVHDVIEGNCCYGLGANTA-AVRCIHPMREHLVAAGDDGKAMVYDF 464          
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Match: E1ZQB7_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZQB7_CHLVA)

HSP 1 Score: 157 bits (398), Expect = 6.330e-41
Identity = 129/383 (33.68%), Postives = 181/383 (47.26%), Query Frame = 1
Query:   16 SDRNLLCASVFGD--EAVFGCADHALYCVDLLRGTKTRQLFRSSSKSACAGHKDWVSAVSHTPGGDIVSGGLDGKLCIWPRDNGVPRQVQAHSGSISAMK----LDAESRVVTSDYSGALRVWDCRGDRNGWVAAPRMMREISSRSLLAPCTDFAWCGSRVLTGHRDGRLGFYDLETGQLLSGSSEHGTAHRGHVTATISAPDVGATGGVGS------TCFVTGGHDGFVRVWDTRRVSSCPSIAAVMESAAHRSAAGVGAVGGILAPKTGSAGGRRLISFGADKRV-SMRSSLVVEHVFSSHR-DFIYCMEIVPSVEGGREGSGILVTGGGDGLLLVHDLCSMRLLYGLGCCSAGAVRCAIGGQDRLTIAGDDGNAMLYKFS 1122
            +DRNLLCASV  +  EAVFG ADHA Y VDL R  K R L   +     AGH++WV+AV H PGG I SGGLD  +C+WP      ++++ H+G IS ++      A +  V++ Y   L  W C G   G     +++         AP       G    +G RDG L  +DL  G  + G  +   AH  H TA ++   VG++GG            ++GG DG VR+WD R          V + AAH   AG GAVG + A    +     +++ GAD+ V  + +   +E V+S    DF Y           R  S +L+ G GDG ++  +       + L   SA AVR    G        DDG+AM+Y  +
Sbjct:   38 ADRNLLCASVDWERHEAVFGSADHACYTVDLRRLKKARTLLGKT-----AGHREWVAAVCHLPGGRIASGGLDASICVWPAAGAACQRIKGHAGPISQLEPVPAAGAAAAFVSASYDKRLITWCCPGGSGGKARHQQVLA-----GHRAPVLQLQVAGGCAASGDRDGALLRWDLAAGAAVGGPLQ---AHTEHCTA-LAWWHVGSSGGSADEISSRGNLLLSGGQDGCVRLWDFRAGRQ------VAQQAAHAGPAGKGAVGSMSAGPPSAP--NLVVTAGADRAVRGLEARRNLEPVWSQELPDFPYSQA--------RSTSAVLL-GCGDGTVVALEAADGSRRFALAA-SASAVRTLHAGPTCFVAGCDDGSAMVYSLT 388          
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Match: A0A067BWT5_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BWT5_SAPPC)

HSP 1 Score: 157 bits (397), Expect = 3.330e-40
Identity = 124/380 (32.63%), Postives = 180/380 (47.37%), Query Frame = 1
Query:   13 LSDRNLLCASVF--GDEAVFGCADHALYCVDLLRGTKTRQLFRSSSKSACAGHKDWVSAVSHTPGGDIVSGGLDGKLCIWPRDNGVPRQVQ---AHSGSISAMKLDAESRVVTSDYSGALRVWDCR-GDRNGWVAAPRMMREISSRSLLAPCTDFAWCGSRVLTGHRDGRLGFYDLETGQLLSGSSEHGTAHRGHVTATIS---APDVGATGGVGSTCFVTGGHDGFVRVWDTRRVSSCPSIAAVMESAAHRSAAGVGAVGGILAPKTGSAGGRRLISFGADKRVSMRSSLV--VEHVFSSHRDFIYCMEIVPSVEGGREGSGILVTGGGDGLLLVHDLCSMRLLYGLGCCSAGAVRCAIGGQDRLTIAGDDGNAMLYKF 1119
            +S + L C S+   G EAV G  DHALY + L      +   R+     C GHK+WV+AV+H   G +VS G+D KLC+W  DNG   + +    H+GSIS ++      +V++ Y    R+WD   G R G     R +     R   AP  D +  GSR++ G R G +  +DL +  L     +   AH GH T+ +    A DV            +GG DG V+ WD R  +S  ++        H    G GAV  +    +       L++ GAD +V +  + +  +   F SH+ FIY + +            +  +G GDG+LLVHDL +  L YGLG   A AVR  +   + L  AGDDG  ++Y F
Sbjct:  115 VSSQPLTCMSLAPDGSEAVVGSCDHALYTIPLRSSGSKKARGRTLYTKTC-GHKEWVTAVAHLADGRVVSAGMDSKLCLW--DNGAVARCEDLTGHAGSISLVQTIGNDWIVSASYDKTYRLWDATPGRRAGKNGRERHVL----RGHDAPILDCSLWGSRLVGGDRSGSVLVFDLASYGL---EKKWKAAHDGHCTSVLGSVFAHDVA----------YSGGQDGVVQRWDLRTKASTLALPV------HSGKTGKGAVSFLREQPSNQ---HVLVTGGADGKVHVLDTRLNALRSTFDSHQTFIYSLHVAHD---------LCFSGSGDGMLLVHDLATDTLCYGLGANQA-AVRAIVTTPNELVAAGDDGCVLVYSF 455          
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Match: A0A024U4F3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4F3_9STRA)

HSP 1 Score: 157 bits (397), Expect = 3.770e-40
Identity = 128/383 (33.42%), Postives = 184/383 (48.04%), Query Frame = 1
Query:   13 LSDRNLLCASVFGD--EAVFGCADHALYCVDLLR--------GTKTRQLFRSSSKSACAGHKDWVSAVSHTPGGDIVSGGLDGKLCIWPRDNGVPRQVQAHSGSISAMKLDAESRVVTSDYSGALRVWDCRGDRNGWVAAPRMMREISSRSLLAPCTDFAWCGSRVLTGHRDGRLGFYDLETGQLLSGSSEHGTAHRGHVTATISAPDVGATGGVGSTCFVTGGHDGFVRVWDTRRVSSCPSIAAVMESAAHRSAAGVGAVGGILAPKTGSAGGRRLISFGADKRVSM---RSSLVVEHVFSSHRDFIYCMEIVPSVEGGREGSGILVTGGGDGLLLVHDLCSMRLLYGLGCCSAGAVRCAIGGQDRLTIAGDDGNAMLYKFS 1122
            +S + L C S+  D  E V G  DHALY + L +        G+  R L+     S  AGH +WV+AV+H P G +VSGG+D KLC+W  +N     +  H+GSIS ++   E+ +V++ Y    R+WD      G  AA         +   AP  DF+  G+R++ G R+G +  +DL    +   +      H GH TA + +          S    +GG DG +R+WD R      S  AVM+ + H S  G GAV  I   K  S     +++ GAD +V +   R+S V    FS H  FIY + +            +  +G G G+LLVHDL +  L YGLG   A AVR        L  AGDDG  ++Y+ +
Sbjct:  120 VSSQPLTCMSLAPDMTEVVVGSCDHALYAIPLQQRKASKGKNGSGVRTLY-----SKTAGHGEWVTAVAHMPDGRVVSGGMDSKLCLWDSNNRC-EDLTGHAGSISLIRPFTENWIVSASYDKTYRLWD---GAPGKRAAKAGRERHCLKGHDAPILDFSLWGNRLIGGDRNGSVLVFDLAQHAVERKAKG---VHIGHCTAVLGSQH-------NSDHAFSGGQDGLLRMWDAR------SKDAVMKVSVHVSQRGTGAVSFI---KDVSTMDHVIVTGGADGKVQVVDVRASNV-RSTFSQHTTFIYSVHVDHE---------LCFSGSGSGMLLVHDLRTDALQYGLGANQA-AVRAIATTATTLAAAGDDGGVLVYEMT 463          
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Match: L1IK44_GUITC (CAP-Gly domain-containing protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1IK44_GUITC)

HSP 1 Score: 157 bits (397), Expect = 5.470e-40
Identity = 122/368 (33.15%), Postives = 175/368 (47.55%), Query Frame = 1
Query:    4 LVDLSDRNLLCASVFGDEAVFGCADHALYCVDLLRGTKTRQLFRSSSKSACAGHKDWVSAVSHTPGGDIVSGGLDGKLCIWPRDNGVPRQVQAHSGSISAMKL----DAESRVVTSDYSGALRVWDCRGDRNGWVAAPRMMREISSRSLLAPCTDFAWCG------SRVLTGHRDGRLGFYDLETGQLLSGSSEHGTAHRGHVTATISAPDVGATGGVGSTCFVTGGHDGFVRVWDTRRVSSCPSIAAVMESAAHRSAAGVGAVGGILAPKTG-SAGGRRLISFGADKRVSM---RSSLVVEHVFSSHR----DFIYCMEIVPSVEGGREGSGILVTGGGDGLLLVHDLCSMRLLYGLGCCSAGAVRC 1053
            L+DLSDR   C SV+G EAV G  DHALY +DL++  K+R L+  +      GH +WV+ VSHT  G ++SGG+DGKLC+W +       +Q HS SIS MK        +   TS Y   + VWD     +  +A+      +   S    C             S +++G RDG    +D+E  +     S     H GH+T+            +    F+ G  DG V+VWD R       IAA      H +  G GAVG I+  +T  +     +++ GAD RV +   RS       F+ H+    DFIY + +  S         I+++G GDG+LL HD+ +  + +GLG   A AVRC
Sbjct:  134 LLDLSDRPNTCISVWGGEAVIGSTDHALYGIDLVKQRKSRTLYTKTH-----GHTEWVTCVSHTADGRVLSGGMDGKLCLWNKAGAQCSDLQGHSASISDMKAVQSDGGGNFAFTSSYDKTVCVWDLSKHASRALAS-----SLKGHSAPVLCMAVVRASEEEAETSSLVSGDRDGVAMLWDVEANK-----SRRIPGHGGHITSLA---------WLDGNTFLVGAQDGKVKVWDVREERFIHQIAA------HVTQQGSGAVGNIVVRRTSPNMATTDVVTAGADCRVQVLDARSGFQPRFTFTEHKFNLEDFIYSLAMAGS---------IILSGAGDGMLLAHDVETGAVCWGLGANKA-AVRC 461          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10489.410.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L364_9PHAE6.600e-12352.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2S1_ECTSI1.280e-11450.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A9U3F5_PHYPA7.790e-5236.81Predicted protein n=2 Tax=Physcomitrium patens Tax... [more]
A0A5B8MJ88_9CHLO1.080e-4533.95WD40 repeat domain-containing protein n=2 Tax=Chlo... [more]
A0A7S3BQX7_9EUKA8.450e-4534.04Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
G0TWV6_TRYVY5.330e-4233.07Uncharacterized protein n=1 Tax=Trypanosoma vivax ... [more]
E1ZQB7_CHLVA6.330e-4133.68Uncharacterized protein n=1 Tax=Chlorella variabil... [more]
A0A067BWT5_SAPPC3.330e-4032.63Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A024U4F3_9STRA3.770e-4033.42Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
L1IK44_GUITC5.470e-4033.15CAP-Gly domain-containing protein n=3 Tax=Guillard... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10489contigH-elongata_contig10489:7245..8468 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score190.7
Seed ortholog evalue1.3e-45
Seed eggNOG ortholog3218.PP1S465_19V6.1
KEGG koko:K10260
KEGG Pathwayko04120,map04120
KEGG ModuleM00387
EggNOG free text desc.WD domain, G-beta repeat
EggNOG OGs37V1D@33090,KOG0274@1,KOG0274@2759
COG Functional cat.S
Best tax levelViridiplantae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04121,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionWD40-repeat-containing domain
Ec32 orthologEc-11_003280.1
Exons3
Model size1128
Cds size1128
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10489.410.1prot_H-elongata_contig10489.410.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig10489 7245..8468 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929582.8060338-CDS-H-elongata_contig10489:7244..75311622929582.8060338-CDS-H-elongata_contig10489:7244..7531Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10489 7245..7531 -
1691679079.6579585-CDS-H-elongata_contig10489:7244..75311691679079.6579585-CDS-H-elongata_contig10489:7244..7531Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10489 7245..7531 -
1622929582.825233-CDS-H-elongata_contig10489:7597..77511622929582.825233-CDS-H-elongata_contig10489:7597..7751Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10489 7598..7751 -
1691679079.6687503-CDS-H-elongata_contig10489:7597..77511691679079.6687503-CDS-H-elongata_contig10489:7597..7751Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10489 7598..7751 -
1622929582.8415713-CDS-H-elongata_contig10489:7781..84681622929582.8415713-CDS-H-elongata_contig10489:7781..8468Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10489 7782..8468 -
1691679079.6778646-CDS-H-elongata_contig10489:7781..84681691679079.6778646-CDS-H-elongata_contig10489:7781..8468Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10489 7782..8468 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig10489.410.1

>prot_H-elongata_contig10489.410.1 ID=prot_H-elongata_contig10489.410.1|Name=mRNA_H-elongata_contig10489.410.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=376bp
QLVDLSDRNLLCASVFGDEAVFGCADHALYCVDLLRGTKTRQLFRSSSKS
ACAGHKDWVSAVSHTPGGDIVSGGLDGKLCIWPRDNGVPRQVQAHSGSIS
AMKLDAESRVVTSDYSGALRVWDCRGDRNGWVAAPRMMREISSRSLLAPC
TDFAWCGSRVLTGHRDGRLGFYDLETGQLLSGSSEHGTAHRGHVTATISA
PDVGATGGVGSTCFVTGGHDGFVRVWDTRRVSSCPSIAAVMESAAHRSAA
GVGAVGGILAPKTGSAGGRRLISFGADKRVSMRSSLVVEHVFSSHRDFIY
CMEIVPSVEGGREGSGILVTGGGDGLLLVHDLCSMRLLYGLGCCSAGAVR
CAIGGQDRLTIAGDDGNAMLYKFSG*
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mRNA from alignment at H-elongata_contig10489:7245..8468-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig10489.410.1 ID=mRNA_H-elongata_contig10489.410.1|Name=mRNA_H-elongata_contig10489.410.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1224bp|location=Sequence derived from alignment at H-elongata_contig10489:7245..8468- (Himanthalia elongata Himel1 dioecious)
CAGCTCGTGGACCTTAGCGACCGGAACCTCCTTTGCGCCAGCGTGTTCGG TGACGAAGCAGTGTTCGGCTGCGCCGACCACGCACTCTATTGCGTAGACC TCTTGCGGGGAACCAAGACACGGCAACTCTTCAGGTCGAGCTCGAAGTCG GCCTGTGCTGGGCATAAAGATTGGGTGTCCGCCGTCTCTCATACCCCAGG CGGGGACATAGTCTCCGGGGGATTGGATGGCAAGCTATGTATTTGGCCGC GTGACAACGGCGTTCCCCGACAGGTCCAGGCCCACTCGGGATCCATTTCC GCGATGAAGTTGGACGCGGAGTCAAGGGTCGTGACGAGTGATTACAGTGG CGCTCTGAGGGTGTGGGACTGCCGGGGTGACAGGAACGGATGGGTTGCGG CGCCTCGCATGATGCGTGAAATATCCAGTCGAAGCCTTCTCGCCCCGTGC ACGGACTTCGCGTGGTGCGGATCCAGAGTCTTGACGGGTCACCGCGACGG TCGACTAGGGTTTTACGACCTCGAGACCGGTCAGCTGTTGAGCGGCAGTA GTGAACATGGAACGGCCCATCGCGGGCACGTCACGGCAACGATAAGCGCC CCCGACGTTGGCGCCACTGGAGGGGTTGGATCAACCTGCTTCGTGACTGG GGGGCATGATGGCTTCGTTCGTGTCTGGGACACCCGCGTGGGTAAGCTCG AGGCATGCGCGGGAGAGAGAGTCAGCTCTTGTCCCTCTATTGCTGCTGTA ATGGAATCAGCAGCACACCGGAGTGCCGCAGGGGTCGGTGCCGTCGGTGG GATATTGGCGCCGAAGACAGGCAGCGCGGGCGGGAGACGTCTCATTTCTT TTGGCGCCGATAAACGTGTGTGTGTTTTTGACGTGCGCGGAGGCACTGGA GAAAAAAATGGCGATCGTCATCACCGGGCTGGGGCAGCGATGCGATCATC ACTCGTCGTCGAGCATGTTTTCAGCTCTCACCGCGATTTCATCTACTGCA TGGAGATCGTACCTTCGGTCGAGGGAGGGCGAGAAGGGAGCGGTATTCTT GTCACAGGCGGAGGAGACGGTTTACTGCTCGTTCACGATCTCTGCTCGAT GCGGCTGTTGTATGGGCTCGGCTGCTGTAGCGCTGGGGCAGTTCGCTGCG CAATCGGTGGCCAAGATAGACTTACTATTGCTGGGGATGATGGCAACGCT ATGCTGTACAAATTCAGCGGCTAA
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Coding sequence (CDS) from alignment at H-elongata_contig10489:7245..8468-

>mRNA_H-elongata_contig10489.410.1 ID=mRNA_H-elongata_contig10489.410.1|Name=mRNA_H-elongata_contig10489.410.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2256bp|location=Sequence derived from alignment at H-elongata_contig10489:7245..8468- (Himanthalia elongata Himel1 dioecious)
CAGCTCGTGGACCTTAGCGACCGGAACCTCCTTTGCGCCAGCGTGTTCGG
TGACGAAGCAGTGTTCGGCTGCGCCGACCACGCACTCTATTGCGTAGACC
TCTTGCGGGGAACCAAGACACGGCAACTCTTCAGGTCGAGCTCGAAGTCG
GCCTGTGCTGGGCATAAAGATTGGGTGTCCGCCGTCTCTCATACCCCAGG
CGGGGACATAGTCTCCGGGGGATTGGATGGCAAGCTATGTATTTGGCCGC
GTGACAACGGCGTTCCCCGACAGGTCCAGGCCCACTCGGGATCCATTTCC
GCGATGAAGTTGGACGCGGAGTCAAGGGTCGTGACGAGTGATTACAGTGG
CGCTCTGAGGGTGTGGGACTGCCGGGGTGACAGGAACGGATGGGTTGCGG
CGCCTCGCATGATGCGTGAAATATCCAGTCGAAGCCTTCTCGCCCCGTGC
ACGGACTTCGCGTGGTGCGGATCCAGAGTCTTGACGGGTCACCGCGACGG
TCGACTAGGGTTTTACGACCTCGAGACCGGTCAGCTGTTGAGCGGCAGTA
GTGAACATGGAACGGCCCATCGCGGGCACGTCACGGCAACGATAAGCGCC
CCCGACGTTGGCGCCACTGGAGGGGTTGGATCAACCTGCTTCGTGACTGG
GGGGCATGATGGCTTCGTTCGTGTCTGGGACACCCGCCAGCTCGTGGACC
TTAGCGACCGGAACCTCCTTTGCGCCAGCGTGTTCGGTGACGAAGCAGTG
TTCGGCTGCGCCGACCACGCACTCTATTGCGTAGACCTCTTGCGGGGAAC
CAAGACACGGCAACTCTTCAGGTCGAGCTCGAAGTCGGCCTGTGCTGGGC
ATAAAGATTGGGTGTCCGCCGTCTCTCATACCCCAGGCGGGGACATAGTC
TCCGGGGGATTGGATGGCAAGCTATGTATTTGGCCGCGTGACAACGGCGT
TCCCCGACAGGTCCAGGCCCACTCGGGATCCATTTCCGCGATGAAGTTGG
ACGCGGAGTCAAGGGTCGTGACGAGTGATTACAGTGGCGCTCTGAGGGTG
TGGGACTGCCGGGGTGACAGGAACGGATGGGTTGCGGCGCCTCGCATGAT
GCGTGAAATATCCAGTCGAAGCCTTCTCGCCCCGTGCACGGACTTCGCGT
GGTGCGGATCCAGAGTCTTGACGGGTCACCGCGACGGTCGACTAGGGTTT
TACGACCTCGAGACCGGTCAGCTGTTGAGCGGCAGTAGTGAACATGGAAC
GGCCCATCGCGGGCACGTCACGGCAACGATAAGCGCCCCCGACGTTGGCG
CCACTGGAGGGGTTGGATCAACCTGCTTCGTGACTGGGGGGCATGATGGC
TTCGTTCGTGTCTGGGACACCCGCAGAGTCAGCTCTTGTCCCTCTATTGC
TGCTGTAATGGAATCAGCAGCACACCGGAGTGCCGCAGGGGTCGGTGCCG
TCGGTGGGATATTGGCGCCGAAGACAGGCAGCGCGGGCGGGAGACGTCTC
ATTTCTTTTGGCGCCGATAAACGTGTGTAGAGTCAGCTCTTGTCCCTCTA
TTGCTGCTGTAATGGAATCAGCAGCACACCGGAGTGCCGCAGGGGTCGGT
GCCGTCGGTGGGATATTGGCGCCGAAGACAGGCAGCGCGGGCGGGAGACG
TCTCATTTCTTTTGGCGCCGATAAACGTGTGTCGATGCGATCATCACTCG
TCGTCGAGCATGTTTTCAGCTCTCACCGCGATTTCATCTACTGCATGGAG
ATCGTACCTTCGGTCGAGGGAGGGCGAGAAGGGAGCGGTATTCTTGTCAC
AGGCGGAGGAGACGGTTTACTGCTCGTTCACGATCTCTGCTCGATGCGGC
TGTTGTATGGGCTCGGCTGCTGTAGCGCTGGGGCAGTTCGCTGCGCAATC
GGTGGCCAAGATAGACTTACTATTGCTGGGGATGATGGCAACGCTATGCT
GTACAAATTCAGCGGCTAACGATGCGATCATCACTCGTCGTCGAGCATGT
TTTCAGCTCTCACCGCGATTTCATCTACTGCATGGAGATCGTACCTTCGG
TCGAGGGAGGGCGAGAAGGGAGCGGTATTCTTGTCACAGGCGGAGGAGAC
GGTTTACTGCTCGTTCACGATCTCTGCTCGATGCGGCTGTTGTATGGGCT
CGGCTGCTGTAGCGCTGGGGCAGTTCGCTGCGCAATCGGTGGCCAAGATA
GACTTACTATTGCTGGGGATGATGGCAACGCTATGCTGTACAAATTCAGC
GGCTAA
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