mRNA_H-elongata_contig1048.396.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig1048.396.1 vs. uniprot
Match: A0A6H5JLC6_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JLC6_9PHAE) HSP 1 Score: 215 bits (548), Expect = 4.760e-62 Identity = 104/152 (68.42%), Postives = 126/152 (82.89%), Query Frame = 1
Query: 4 LNIFLEYLDKGSVRDRLEREGRMSEAETAGITKKFLAGLAYLHSQGITHRDIKGANVLLSRGGAVKLADFGTSKLVNQESVMSGLKGTPHWMAPEVIRDQQQGHEGWIRADVWSVGCMVIEMLTGKRPWPDVPNAVAVMFKIARGMTPPIDR 459
LNIFLEY+D GS+R RL+REG M E +TA +T+K L GLAYLHS ITHRDIKGANVLLS+ GAVKLADFGTSK ++Q+SV+SGLKGTP+WMAPEVI++Q GW++ADVWSVGC V+EMLTGK PWP++PN + MFKI G PP++R
Sbjct: 150 LNIFLEYMDGGSLRRRLDREGPMCERQTAVVTRKVLCGLAYLHSNNITHRDIKGANVLLSKKGAVKLADFGTSKPMDQDSVVSGLKGTPNWMAPEVIKNQLLPG-GWLQADVWSVGCTVVEMLTGKMPWPNMPNPLCAMFKIVSGDKPPVNR 300
BLAST of mRNA_H-elongata_contig1048.396.1 vs. uniprot
Match: I2CPJ7_NANGC (Ha-tagged protein kinase domain of mitogen-activated protein kinase kinase kinase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPJ7_NANGC) HSP 1 Score: 200 bits (508), Expect = 1.680e-61 Identity = 93/152 (61.18%), Postives = 116/152 (76.32%), Query Frame = 1
Query: 4 LNIFLEYLDKGSVRDRLEREGRMSEAETAGITKKFLAGLAYLHSQGITHRDIKGANVLLSRGGAVKLADFGTSKLVNQESVMSGLKGTPHWMAPEVIRDQQQGHEGWIRADVWSVGCMVIEMLTGKRPWPDVPNAVAVMFKIARGMTPPIDR 459
LNIFLEY +GS+R L+ EG ++E +T T++ L GL YLH GI HRD+KGANVL+SR GA+KLADFG SK + ES+MSGLKGTPHWMAPE+I+ + EGW +ADVWS+GC V+EMLTG+ PWPD PN +A M+ IA G +PPI R
Sbjct: 91 LNIFLEYCPRGSLRHMLQSEGALTERQTGIYTRQILMGLRYLHENGIAHRDVKGANVLVSREGAMKLADFGASKRLGHESLMSGLKGTPHWMAPEIIKGAKTS-EGWKKADVWSLGCTVVEMLTGRMPWPDHPNPIAAMYHIANGQSPPIHR 241
BLAST of mRNA_H-elongata_contig1048.396.1 vs. uniprot
Match: A0A835YVT9_9STRA (Ha-tagged protein kinase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVT9_9STRA) HSP 1 Score: 200 bits (508), Expect = 1.830e-61 Identity = 93/152 (61.18%), Postives = 117/152 (76.97%), Query Frame = 1
Query: 4 LNIFLEYLDKGSVRDRLEREGRMSEAETAGITKKFLAGLAYLHSQGITHRDIKGANVLLSRGGAVKLADFGTSKLVNQESVMSGLKGTPHWMAPEVIRDQQQGHEGWIRADVWSVGCMVIEMLTGKRPWPDVPNAVAVMFKIARGMTPPIDR 459
LNIFLEY+D GS+R LE+ G +SE TA TK+ L GL +LH++ ITHRD+KGAN+L+ R G++KLADFG +K + ESV GLKGTPHWMAPEVIR QQ GW +ADVWSVGC V+EMLTG+ PWP++ N +A M++IA G PP+DR
Sbjct: 110 LNIFLEYVDGGSLRKMLEKTGPLSEPHTACNTKQILEGLRHLHTRNITHRDVKGANILVCRDGSLKLADFGAAKRMGHESVCGGLKGTPHWMAPEVIRGQQMA-SGWFKADVWSVGCTVVEMLTGRMPWPNISNPMAAMYRIANGEKPPLDR 260
BLAST of mRNA_H-elongata_contig1048.396.1 vs. uniprot
Match: A0A7S2RVT5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVT5_9STRA) HSP 1 Score: 187 bits (474), Expect = 4.690e-53 Identity = 93/150 (62.00%), Postives = 110/150 (73.33%), Query Frame = 1
Query: 4 LNIFLEYLDKGSVRDRLEREGRMSEAETAGITKKFLAGLAYLHSQGITHRDIKGANVLLSRGGAVKLADFGTSKLVNQESVMSGLKGTPHWMAPEVIRDQQQGHEGWIRADVWSVGCMVIEMLTGKRPWPDVPNAVAVMFKIARGMTPPI 453
LNIFLEY GS+R L+ +G +SE ET+ T + L GL YLHS THRDIKGANVLLS G KLADFG K V S +SGLKGTPHWMAPEVIR +Q GW +AD+WSVGC VIEMLTG+ PWPD+PN +A +++IA G +PPI
Sbjct: 123 LNIFLEYAAGGSLRQLLQEKGGLSEEETSRYTYQILQGLHYLHSNEKTHRDIKGANVLLSAEGFCKLADFGACKHVEATSYVSGLKGTPHWMAPEVIRGEQGS--GWQKADIWSVGCTVIEMLTGQAPWPDLPNPIAALYRIAHGDSPPI 270
BLAST of mRNA_H-elongata_contig1048.396.1 vs. uniprot
Match: F0Y0R9_AURAN (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0R9_AURAN) HSP 1 Score: 165 bits (417), Expect = 1.400e-48 Identity = 85/158 (53.80%), Postives = 108/158 (68.35%), Query Frame = 1
Query: 1 RLNIFLEYLDKGSVRDRLEREGRMSEAETAGITKKFLAGLAYLHSQGITHRDIKGANVLLSRGGAVK--LADFGTSKLVN----QESVMSGLKGTPHWMAPEVIRDQQQGH-EGWIRADVWSVGCMVIEMLTGKRPWPDVPNAVAVMFKIARGMTPPI 453
RL+IF+EY GSVR L+ G SEA A ++ L GL YLH+ G+ HRDIKGAN+LLS A + LADFG SK + +SV+SGLKGTP WMAPEVI+ Q G +GW+ ADVWS+GC ++EM+TG+ PWP PN +A M+ IA G PP+
Sbjct: 29 RLSIFMEYAMGGSVRQLLQDGGAFSEARAARTLEQVLRGLTYLHAHGVAHRDIKGANILLSAPAARERDLADFGASKRIGTLGEDKSVLSGLKGTPRWMAPEVIKGQIAGTLDGWVLADVWSMGCTMVEMVTGEMPWPMFPNPMAAMYHIADGKAPPL 186
BLAST of mRNA_H-elongata_contig1048.396.1 vs. uniprot
Match: A0A482SBK5_9ARCH (Protein kinase domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SBK5_9ARCH) HSP 1 Score: 158 bits (400), Expect = 6.170e-46 Identity = 80/146 (54.79%), Postives = 99/146 (67.81%), Query Frame = 1
Query: 1 RLNIFLEYLDKGSVRDRLEREGRMSEAETAGITKKFLAGLAYLHSQGITHRDIKGANVLLSRGGAVKLADFGTSKLVNQESVMSGLKGTPHWMAPEVIRDQQQGHEGWIRADVWSVGCMVIEMLTGKRPWPDVPNAVAVMFKIARG 438
R+NI +EY GS+R +REG +SE ETA LAGLAYLH++G HRDIK AN LL VKLADFG SK ES++SGLKGTP+WMAPE IR G W+RAD+WS+GC V+EMLT + P+ + N + M+KIA G
Sbjct: 86 RINIVMEYAVYGSLRQFYQREGALSEDETAYCVVDILAGLAYLHAKGFAHRDIKCANCLLFPQSRVKLADFGASKRFESESIVSGLKGTPNWMAPETIRGDCAG-PAWMRADIWSLGCSVVEMLTAQMPYAEYENPLTAMYKIAGG 230
BLAST of mRNA_H-elongata_contig1048.396.1 vs. uniprot
Match: A0A7S3HB88_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HB88_9STRA) HSP 1 Score: 160 bits (404), Expect = 2.000e-45 Identity = 79/149 (53.02%), Postives = 99/149 (66.44%), Query Frame = 1
Query: 1 RLNIFLEYLDKGSVRDRLEREGRMSEAETAGITKKFLAGLAYLHSQGITHRDIKGANVLLSRGGAVKLADFGTSKLVNQESVMSGLKGTPHWMAPEVIRDQQQGHEGWIRADVWSVGCMVIEMLTGKRPWPDVPNAVAVMFKIARGMTP 447
R+ IFLEY D+GS+R G +SE++ + +AGL YLH GI HRDIK AN LL G VKLADFG SK +S++SGLKGTPHWMAPEVI+ Q GW++ADVWS+GC V+EM T K P+ + N + M+KIA G P
Sbjct: 78 RVFIFLEYADRGSLRHFYSNRGPLSESQITFCLQGIVAGLNYLHENGIAHRDIKCANCLLGSEGVVKLADFGASKRFESDSIVSGLKGTPHWMAPEVIKGTQMT-TGWMKADVWSLGCTVVEMFTAKVPYAEYENPMTAMYKIASGEVP 225
BLAST of mRNA_H-elongata_contig1048.396.1 vs. uniprot
Match: A0A6T5VXF8_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A6T5VXF8_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.660e-44 Identity = 79/149 (53.02%), Postives = 104/149 (69.80%), Query Frame = 1
Query: 1 RLNIFLEYLDKGSVRDRLEREGRMSEAETAGITKKFLAGLAYLHSQGITHRDIKGANVLLSRGGAVKLADFGTSKLVNQESVMSGLKGTPHWMAPEVIRDQQQGHEGWIRADVWSVGCMVIEMLTGKRPWPDVPNAVAVMFKIARGMTP 447
++NIFLE+ GS++ +++G M E + TK+ L GL YLH++GI HRDIK AN LL+ G VKLADFG SK ES++SGLKGTP+WMAPEVIR Q GW++ADVWSVGC ++EMLT K P+ + N + M+ IA G +P
Sbjct: 81 KINIFLEFATLGSLQSYYKKKGPMKENQAINCTKQILNGLEYLHNKGIAHRDIKCANCLLTSKGVVKLADFGASKKYESESIVSGLKGTPNWMAPEVIRGTQMT-SGWMKADVWSVGCTIVEMLTAKLPFSEYDNPMTAMYHIANGKSP 228
BLAST of mRNA_H-elongata_contig1048.396.1 vs. uniprot
Match: A0A7S1CQA9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQA9_9STRA) HSP 1 Score: 162 bits (410), Expect = 2.480e-43 Identity = 81/145 (55.86%), Postives = 100/145 (68.97%), Query Frame = 1
Query: 4 LNIFLEYLDKGSVRDRLEREGRMSEAETAGITKKFLAGLAYLHSQGITHRDIKGANVLLSRGGAVKLADFGTSKLVNQESVMS--GLKGTPHWMAPEVIRDQQQGHEGWIRADVWSVGCMVIEMLTGKRPWPDVPNAVAVMFKIA 432
L+IFLEY+ GS+R + R G++ EA T++ L GL YLH GI HRDIKGANVL++ G +KLADFG SK + +SV + GLKGTP WMAPEVI++QQ GW +AD+WSVGC VIEM TGK PW N V M+ IA
Sbjct: 724 LSIFLEYVPGGSIRSLVNRFGKLDEAVVRVYTRQLLLGLEYLHRHGIAHRDIKGANVLVANDGTIKLADFGASKQLGHKSVTANTGLKGTPLWMAPEVIKEQQSAR-GWKKADIWSVGCTVIEMATGKPPWSHFSNPVTAMYHIA 867
BLAST of mRNA_H-elongata_contig1048.396.1 vs. uniprot
Match: A0A7S4E6M1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E6M1_9STRA) HSP 1 Score: 156 bits (394), Expect = 2.040e-42 Identity = 79/159 (49.69%), Postives = 105/159 (66.04%), Query Frame = 1
Query: 1 RLNIFLEYLDKGSVRDRLEREGRMSEAETAGITKKFLAGLAYLHSQGITHRDIKGANVLLSRG-GAVKLADFGTSKLVNQESV------MSGLKGTPHWMAPEVIRDQQQGH-EGWIRADVWSVGCMVIEMLTGKRPWPDVPNAVAVMFKIARGMTPPI 453
+L+IF+E+ GSVR L+ +G + E+ A + L GL YLH+ GI HRD+KGANVLLS +LADFG SK + + SGL+GTP WMAPE+IR + G EGWI +DVWSVGC ++EM TG+ PWP PN +A MF I++G+ PP+
Sbjct: 92 KLSIFMEFAPGGSVRQLLKAKGALDESICASYIDQVLQGLEYLHTNGIAHRDVKGANVLLSHDLTGAQLADFGASKRIEKLGEDASGGGASGLRGTPRWMAPELIRGELSGDLEGWILSDVWSVGCTLVEMATGQLPWPQFPNPMAAMFHISQGIAPPL 250 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1048.396.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1048.396.1 >prot_H-elongata_contig1048.396.1 ID=prot_H-elongata_contig1048.396.1|Name=mRNA_H-elongata_contig1048.396.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=154bp RLNIFLEYLDKGSVRDRLEREGRMSEAETAGITKKFLAGLAYLHSQGITHback to top mRNA from alignment at H-elongata_contig1048:10414..11146- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1048.396.1 ID=mRNA_H-elongata_contig1048.396.1|Name=mRNA_H-elongata_contig1048.396.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=733bp|location=Sequence derived from alignment at H-elongata_contig1048:10414..11146- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1048:10414..11146- >mRNA_H-elongata_contig1048.396.1 ID=mRNA_H-elongata_contig1048.396.1|Name=mRNA_H-elongata_contig1048.396.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=924bp|location=Sequence derived from alignment at H-elongata_contig1048:10414..11146- (Himanthalia elongata Himel1 dioecious)back to top |