mRNA_H-elongata_contig104719.388.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig104719.388.1 vs. uniprot
Match: D8LI64_ECTSI (Catalytic, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI64_ECTSI) HSP 1 Score: 219 bits (557), Expect = 1.020e-66 Identity = 103/168 (61.31%), Postives = 131/168 (77.98%), Query Frame = 3
Query: 315 DARVTEFGKQQCANLKAGNHGLE-DAKLVVVSSLSRAIQTALLSIEQVPGVPWIALDCARERAGQHPCDGRRPVHDLKKNFPTITFDNIVDDEDKLYDALGNERETEDALIKRGQELLTWLGERPETNIVVVTHSSFLSCLFNNVVVAPAHLGKWFKNCELRTVYMDL 815
DAR+T+ GKQQCA LKA HG+E +A+LVVVS L+RAIQTA L+I+QV GVPW+AL+C RERAG HPCD RR V +LK +P I+FD I D++D +D+LG ERE D + RG+EL +WL +RPETNIVVVTHS+FL CLFN + A KWF+NCELR+V+++L
Sbjct: 59 DARLTDLGKQQCATLKATKHGIEKEAQLVVVSPLARAIQTATLTIDQVEGVPWVALECVRERAGAHPCDRRRCVSELKGEYPNISFDAIKDEKDVYFDSLGEEREPNDLMADRGRELFSWLKDRPETNIVVVTHSAFLLCLFNEAMQAAPETAKWFENCELRSVFLEL 226
BLAST of mRNA_H-elongata_contig104719.388.1 vs. uniprot
Match: D8LI65_ECTSI (Catalytic, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI65_ECTSI) HSP 1 Score: 214 bits (546), Expect = 4.620e-65 Identity = 102/168 (60.71%), Postives = 132/168 (78.57%), Query Frame = 3
Query: 315 DARVTEFGKQQCANLKAGNHGLE-DAKLVVVSSLSRAIQTALLSIEQVPGVPWIALDCARERAGQHPCDGRRPVHDLKKNFPTITFDNIVDDEDKLYDALGNERETEDALIKRGQELLTWLGERPETNIVVVTHSSFLSCLFNNVVVAPAHLGKWFKNCELRTVYMDL 815
DAR+T+ GK+QCA LKA NHG+E +A+LVVVS L+RAI+TA+L+I+QV GVPW+AL+C RERAG PCD RR V +LK +P I+FD I DD+D +D+ G+ERET D++ RG+EL +WL +RPETNIVVVTHS FL LF V+++P K FKNCELR+V +DL
Sbjct: 59 DARLTDLGKEQCATLKAANHGIEKEAELVVVSPLTRAIETAMLAIDQVEGVPWVALECVRERAGVQPCDRRRCVSELKMEYPNISFDAITDDDDAYFDSQGDERETYDSMAHRGRELFSWLRDRPETNIVVVTHSGFLLSLFKRVMLSPPDTAKDFKNCELRSVLLDL 226
BLAST of mRNA_H-elongata_contig104719.388.1 vs. uniprot
Match: A0A836CMC3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMC3_9STRA) HSP 1 Score: 166 bits (419), Expect = 6.260e-46 Identity = 80/169 (47.34%), Postives = 113/169 (66.86%), Query Frame = 3
Query: 315 DARVTEFGKQQCANLKAG-NHGLEDAKLVVVSSLSRAIQTALLSIEQVPG-VPWIALDCARERAGQHPCDGRRPVHDLKKNFPTITFDNIVDDEDKLYDALGNERETEDALIKRGQELLTWLGERPETNIVVVTHSSFLSCLFNNVVVAPAHLGKWFKNCELRTVYMDL 815
DAR+T+ G++Q L A +++ +L+VVS +SRA++TA ++ EQVP +PW+AL+CARERAG HPCD RR +LK++FP I + I D D L+D LG +RET+ ++ R +L W+ RPETNI +VTHS++LS LFN V L WF N E+R+ M L
Sbjct: 68 DARLTDLGREQAQGLGATLGTTIDEIQLMVVSPMSRALETASIAFEQVPSHIPWVALECARERAGNHPCDKRRTRTELKEHFPHIDWSLIESDSDALWDTLGEDRETDGMMVARAHDLFEWIRARPETNIAIVTHSAYLSVLFNKAVRCGEGLQTWFNNAEMRSTLMQL 236
BLAST of mRNA_H-elongata_contig104719.388.1 vs. uniprot
Match: A0A835YRM9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRM9_9STRA) HSP 1 Score: 163 bits (413), Expect = 4.220e-45 Identity = 80/171 (46.78%), Postives = 111/171 (64.91%), Query Frame = 3
Query: 309 FADARVTEFGKQQCANLKAGN-HGLEDAKLVVVSSLSRAIQTALLSIEQVPG-VPWIALDCARERAGQHPCDGRRPVHDLKKNFPTITFDNIVDDEDKLYDALGNERETEDALIKRGQELLTWLGERPETNIVVVTHSSFLSCLFNNVVVAPAHLGKWFKNCELRTVYMDL 815
F DAR+T+ G++QC L+ E+ +L+VVS +SRAI TA+++ ++VP VPWIAL+C RER+G H CD RR +L + +P I + + D D +D LG++RET++ + R L W+ R ETNI +VTHS+FLS LFN V A L +WF N ELRTV M L
Sbjct: 61 FMDARLTDLGREQCRTLQGRVVSNCEEVQLMVVSPMSRAIDTAMIAFDKVPSHVPWIALECIRERSGNHACDKRRTKTELLQQYPQIDWSKVESDSDVYWDTLGDDRETDEMMEDRAHALFDWIRSRSETNIAIVTHSAFLSVLFNKAVRCGARLQRWFDNAELRTVLMQL 231
BLAST of mRNA_H-elongata_contig104719.388.1 vs. uniprot
Match: A0A6V1S4P3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S4P3_HETAK) HSP 1 Score: 159 bits (402), Expect = 4.830e-43 Identity = 88/193 (45.60%), Postives = 112/193 (58.03%), Query Frame = 3
Query: 309 FADARVTEFGKQQCANLKA------GNHGLEDAKLVVVSSLSRAIQTALLSIEQVPG-VPWIALDCARERAGQHPCDGRRPVHDLKKNFPTITFDNIVDDEDKLYDALGNERETEDALIKRGQELLTWLGERPETNIVVVTHSSFLSCLFNNVVVAPAHLGKWFKNCELRTVYMDL*VCFKTNQRPCPRHANL 866
F DA +T GK+QCA KA G HG +LVVVS L R +QTA L+ Q G VPW+AL+ RER G HPCD RRP+ +K FP + F + D+ED + G RE+++ + R LL +L RPE NI+VVTHS+FL C FN VVV L +WF NCE R+V +D T Q P + L
Sbjct: 63 FEDAELTALGKEQCATAKAEWASARGRHGYGPPELVVVSPLRRCLQTATLAFGQYAGQVPWVALEEVRERNGHHPCDRRRPLAHARKEFPHVDFSLVKDEEDVTWGD-GRWRESDEEMAVRSAALLKFLAGRPERNIIVVTHSAFLLCTFNKVVVCEPELRRWFANCERRSVALDFGADPATRQLCQPEASTL 254
BLAST of mRNA_H-elongata_contig104719.388.1 vs. uniprot
Match: A0A7S2Y325_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y325_9STRA) HSP 1 Score: 152 bits (384), Expect = 2.570e-40 Identity = 79/184 (42.93%), Postives = 111/184 (60.33%), Query Frame = 3
Query: 315 DARVTEFGKQQCANLKAG---NHGLEDAKLVVVSSLSRAIQTALLSIEQVPGVPWIALDCARERAGQHPCDGRRPVHDLKKNFPTITFDNIVDDEDKLYDALGNERETEDALIKRGQELLTWLGERPETNIVVVTHSSFLSCLFNNVVVAPAHLGKWFKNCELRTVYMDL*VCFKTNQRPCPRH 857
DAR+TE GK+QC NH L+ +LV+VS L+R ++TA L +++V GVPW+AL+C RER +PCD RR ++ + K FP + F + DKL+ RE+ + L RG+E L WL R ETN+VVVTHS+FL FN V+ + +WF NCE+R+V + TN +P H
Sbjct: 93 DARLTEHGKRQCREANEAEKLNHHLKGHQLVLVSPLTRCLETAELVVDKVAGVPWVALECIRERLHGNPCDRRRSINVVAKEFPYVDFSSFEVKPDKLWQE--GPRESNEELAARGREFLKWLEAREETNVVVVTHSAFLDITFNQVLKCDVAMKRWFNNCEIRSVLLSFP---STNGQPSNGH 271
BLAST of mRNA_H-elongata_contig104719.388.1 vs. uniprot
Match: A0A7S4JBS8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JBS8_9STRA) HSP 1 Score: 145 bits (366), Expect = 5.440e-38 Identity = 87/225 (38.67%), Postives = 126/225 (56.00%), Query Frame = 3
Query: 177 KYEL*SLL*TRLNTMHETRR-----NLKKKKMFPCYSCLI*ARLTFMQD-FADARVTEFGKQQCANLKAGNHGLE---DAKLVVVSSLSRAIQTALLSI--EQVPGVPWIALDCARERAGQHPCDGRRPVHDLKKNFPTITFDNIVDDEDKLYD-ALGNERETEDALIKRGQELLTWLGERPETNIVVVTHSSFLSCLFNNVVVAPAHLGKWFKNCELRTVYMDL 815
++E ++L +++ T+H R NL K+ R+ +M DAR+TE G +QC + H + LV+VS +RA TAL + V W AL+C RE++GQHPCDGRR V LK FP I + + DDED + LG ERET++ + R ++ L +L RPE N+VVVTHS+FL LFN VV + L +W++NCE+RT + +
Sbjct: 19 RWEAGAVLASKIRTVHFVRHAQATHNLAAKEE---------GRIAYMDPTHHDARLTEGGMKQCDG-RLREHAKSVAGEVDLVLVSPCTRATDTALRGFGGDVSESVKWYALECLREKSGQHPCDGRRAVSQLKAEFPKINYSLMEDDEDVYGEKTLGEERETDEMVAARARQFLAFLDGRPERNVVVVTHSAFLCVLFNRVVTCGSDLRRWYENCEMRTTHFTI 233
BLAST of mRNA_H-elongata_contig104719.388.1 vs. uniprot
Match: A0A482S1J1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1J1_9ARCH) HSP 1 Score: 119 bits (298), Expect = 5.580e-28 Identity = 70/175 (40.00%), Postives = 99/175 (56.57%), Query Frame = 3
Query: 306 DFADARVTEFGKQQCANLKAG-NHGLEDAKLVVVSSLSRAIQTALLSIEQVPG-VPWIALDCARERAGQHPCDGRRPVHDLKKNFPTITFDNIVDDEDKLYDALGNERETEDALIKRGQELLTWLGERPETNIVVVTHSSFLSCLFNNVV-VAPAH--LGKWFKNCELRTVYMDL 815
D DA +TE G +QC L H ++L+VVS +SR +QTA S + +PW++++C RER G HPCD RR + K+ + + FD+I +ED L+ RE E+ + R +E L WL R E IVVV+HS+FL L N V+ V H G F NCE++T + L
Sbjct: 73 DLEDAHITEEGLKQCQELSEKMKHVTAHSQLLVVSPMSRTLQTASHSFPHLQHKIPWVSIECIRERTGLHPCDKRRALSVYKQQYTYVDFDHIHHEEDPLFPKY-TLREPEEQVKARAREFLDWLASREEREIVVVSHSNFLRILLNQVLQVELQHEDQGGKFANCEIKTYVLRL 246
BLAST of mRNA_H-elongata_contig104719.388.1 vs. uniprot
Match: A0A7S0M519_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M519_9CRYP) HSP 1 Score: 112 bits (279), Expect = 1.710e-24 Identity = 68/170 (40.00%), Postives = 94/170 (55.29%), Query Frame = 3
Query: 315 DARVTEFGKQQCANLKAGNHGLE---DAKLVVVSSLSRAIQTALLSIE-QVPGVPWIALDCARERAGQHPCDGRRPVHDLKKNFPTITFDNIVDDEDKLYDALGNERETEDALIKRGQELLTWLGERPETNIVVVTHSSFLSCLFNNVVVAPAH-----LGKWFKNCELR 797
DA +T G+ QC L+ L D +LVVVS L+R +QTA+ ++ + VP++A + RER P D RRPV LKK FP + F + DED +++ + +E DA +RG + L WL +RPET I VVTHS FL LF + A L + NCE+R
Sbjct: 151 DAGLTVAGQAQCGRLRREIEALPHPLDLELVVVSPLTRTLQTAMRTVPPSLHDVPFVATELCRERVTSCPADSRRPVSVLKKEFPAVDFSEVRTDEDLMFECM---KEDSDACKQRGIKFLQWLAKRPETRIAVVTHSGFLKRLFEQFGMDIARDDQDELHRRPANCEMR 317
BLAST of mRNA_H-elongata_contig104719.388.1 vs. uniprot
Match: A0A7S1IMD5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IMD5_9EUGL) HSP 1 Score: 111 bits (278), Expect = 2.210e-24 Identity = 61/168 (36.31%), Postives = 97/168 (57.74%), Query Frame = 3
Query: 315 DARVTEFGKQQCANLKAGNHGLEDAKLVVVSSLSRAIQTALLSIEQV--PGVPWIALDCARERAGQHPCDGRRPVHDLKKNFPTITFDNIVDDEDKLYDALGNERETEDALIKRGQELLTWLGERPETNIVVVTHSSFLSCLFNNVVVA-PAHLGKWFKNCELRTVYM 809
D +TE G+QQ L+ ++VVVS ++RA+ T+ ++ + G+PWIA + RE++ + CD RR +L FP + F N+ + + L G ET+ + R + + W+ +RPET IVV THS++L +FN V+ PA L +WF+N ELRTV++
Sbjct: 168 DPPLTEIGRQQAKALQPYARTTRP-EMVVVSPMNRALMTSNIAFAHMLKAGIPWIAHEGCREKSHGNACDYRRTATELAAEFPNVNFSNVQEQDPWLSRPEGERTETDASQAARAYDFMLWIRDRPETEIVVSTHSAWLFSVFNTVLQCQPASLAEWFQNGELRTVHV 334 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig104719.388.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig104719.388.1 >prot_H-elongata_contig104719.388.1 ID=prot_H-elongata_contig104719.388.1|Name=mRNA_H-elongata_contig104719.388.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=173bp MQDFADARVTEFGKQQCANLKAGNHGLEDAKLVVVSSLSRAIQTALLSIEback to top mRNA from alignment at H-elongata_contig104719:128..2165+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig104719.388.1 ID=mRNA_H-elongata_contig104719.388.1|Name=mRNA_H-elongata_contig104719.388.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2038bp|location=Sequence derived from alignment at H-elongata_contig104719:128..2165+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig104719:128..2165+ >mRNA_H-elongata_contig104719.388.1 ID=mRNA_H-elongata_contig104719.388.1|Name=mRNA_H-elongata_contig104719.388.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1038bp|location=Sequence derived from alignment at H-elongata_contig104719:128..2165+ (Himanthalia elongata Himel1 dioecious)back to top |