mRNA_H-elongata_contig10459.380.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig10459.380.1 vs. uniprot
Match: D7FMK6_ECTSI (ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMK6_ECTSI) HSP 1 Score: 818 bits (2112), Expect = 2.270e-283 Identity = 443/574 (77.18%), Postives = 482/574 (83.97%), Query Frame = 1
Query: 1 VSILRGLKERYEVHHGVRLQDAALVSAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEASQFINISHFMQ*IPQLH*YMVASAFKALEIIFNNLLVSPKTLL**F*IKFAQVTSKPQVIDEVDRRLIQLEMEKLSLRKEIRPDALKRVEQIDHEMEVLKDKQENLMRTWNEERGRVGKMQALKEKLDALKVEIEHAERGYDLNKAAELKYAVMPKLQKELEEEEDSVDLDD-DNTSSNGNRMLRDEVTPDDIAAIVASWTGIPPGKLMESEREKLLHLEDELHRRVIGQDEAVRVVAEAIQRSRAGLNDPNKPIASLIFLGPTGVGKTELCKALAAYMFDTEEAMVRIDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTDAIRQRPYSVVLFDEMEKAHPDVFNIMLQLLDDGRVTDSKGNVVNFCNSIVIFTSNVGGQTILDVSSNQDSGAREEMRSRVMAAMRDGFRPEFLNRIDEFVIFERLSVLDMRKITSLELKKVSGRLADKDVTLEATDAALDFLAEVGYDAAYGARPLKRAIQREVETVLAKRIISGEITPGVHLVADIINERLVI 1719
VSILRGLKERYEVHHGVRLQDA+LV+AAQLSHRYIADRFLPDKAIDLVDEAAAKLNIE VTSKPQ+IDEVDRRLIQLEMEKLSLRKE R DALKR+EQID EM L++KQE L W+ ERGRVGK+Q LKEK+DALKVEIEHAERGYDLNKAAEL YAVMPKLQKELEEEE +D D D+ + G+RMLRDEVTPDDIA++VASWTGIPPGKLM SER+KL++LEDELH+RV+GQDEAVRVV+EAIQRSRAGLNDP+KPIASLIFLGPTGVGKTELCKALAAYMFDTE+A+VRIDMSEYMEKF+VSRLVGAPPGYVGYEEGGQLTDAIRQRPYSVVLFDEMEKAHPDVFNIMLQLLDDGRVTDSKGNVVNFCN I+IFTSNVG Q+ILDVSS + G REEMR+RVMAAMR+GFRPEFLNRIDEFVIF+RLS DMR I+ LELKKV+ RLAD+D+TLEA+D+ALDFL+ VGYD AYGARPLKR IQREVETVLAKRIISGEI G LVAD+INERLVI
Sbjct: 355 VSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIE-----------------------------------------------------VTSKPQMIDEVDRRLIQLEMEKLSLRKETRADALKRIEQIDDEMAELQEKQEGLTSAWDLERGRVGKVQTLKEKIDALKVEIEHAERGYDLNKAAELTYAVMPKLQKELEEEEAVLDKDGADSHTDGGSRMLRDEVTPDDIASVVASWTGIPPGKLMSSERDKLMNLEDELHQRVVGQDEAVRVVSEAIQRSRAGLNDPDKPIASLIFLGPTGVGKTELCKALAAYMFDTEDALVRIDMSEYMEKFAVSRLVGAPPGYVGYEEGGQLTDAIRQRPYSVVLFDEMEKAHPDVFNIMLQLLDDGRVTDSKGNVVNFCNCIIIFTSNVGSQSILDVSSAEGGGVREEMRNRVMAAMREGFRPEFLNRIDEFVIFDRLSAEDMRHISGLELKKVTLRLADRDITLEASDSALDFLSSVGYDPAYGARPLKRTIQREVETVLAKRIISGEIASGDVLVADVINERLVI 875
BLAST of mRNA_H-elongata_contig10459.380.1 vs. uniprot
Match: A0A835Z9T5_9STRA (ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9T5_9STRA) HSP 1 Score: 686 bits (1769), Expect = 5.390e-232 Identity = 378/575 (65.74%), Postives = 432/575 (75.13%), Query Frame = 1
Query: 1 VSILRGLKERYEVHHGVRLQDAALVSAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEASQFINISHFMQ*IPQLH*YMVASAFKALEIIFNNLLVSPKTLL**F*IKFAQVTSKPQVIDEVDRRLIQLEMEKLSLRKEIRPDALKRVEQIDHEMEVLKDKQENLMRTWNEERGRVGKMQALKEKLDALKVEIEHAERGYDLNKAAELKYAVMPKLQKELEEEEDSVDLDDDNTSSNGNRMLRDEVTPDDIAAIVASWTGIPPGKLMESEREKLLHLEDELHRRVIGQDEAVRVVAEAIQRSRAGLNDPNKPIASLIFLGPTGVGKTELCKALAAYMFDTEEAMVRIDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTDAIRQRPYSVVLFDEMEKAHPDVFNIMLQLLDDGRVTDSKGNVVNFCNSIVIFTSNVGGQTILDVSSNQDSGAREEMRSRVMAAMRDGFRPEFLNRIDEFVIFERLSVLDMRKITSLELKKVSGRLADKDVTLEATDAALDFLAEVGYDAAYGARPLKRAIQREVETVLAKRIISGEITPGVHLVADIINERLVITV 1725
VSILRGLKERYEVHH VR+QD+ALV+AAQLS+RYI DRFLPDKAIDLVDEAAAKLNIE VTSKP VIDEVDRRL+QLEMEKLSL+ E RPD +R I+ +M L+DKQ+ L W++ER VGK+ LK ++DAL+VEIE AER YDLNKAAELKYA +PKL KEL EE+ L D + R+LRDEVTP+DIA +VA WTGIP KL+ S+REKLLHL+D L RV+GQD+A +VVAEAIQRSRAGLNDPNKPIAS +FLGPTGVGKTEL K LAAYMFD+EEA+VRIDMSEYMEKF+VSRL+GAPPGYVGYEEGGQLTDA+R+RPYSV+LFDEMEKAH DVFN+MLQ+LDDGRVTDSKGNVVNFCN ++IFTSNVG + ILD++ + EEMRSRVMAAMR FRPEFLNR+DEFVIF L MR IT+LELKKV RLADK +TL+AT+ ALDFLAEVG D YGARPLKRAIQREVET +AK II+G PG + A I NERL + V
Sbjct: 338 VSILRGLKERYEVHHKVRIQDSALVAAAQLSNRYITDRFLPDKAIDLVDEAAAKLNIE-----------------------------------------------------VTSKPTVIDEVDRRLVQLEMEKLSLKNEKRPDTNRRTRDIETQMAELRDKQKGLTEVWDKERAAVGKVTGLKARIDALRVEIETAEREYDLNKAAELKYATLPKLLKELAAEEER--LGDGEGGAAAGRILRDEVTPEDIAGVVAMWTGIPTTKLLASDREKLLHLQDVLAERVVGQDDATQVVAEAIQRSRAGLNDPNKPIASFVFLGPTGVGKTELAKTLAAYMFDSEEALVRIDMSEYMEKFAVSRLIGAPPGYVGYEEGGQLTDAVRRRPYSVILFDEMEKAHGDVFNVMLQILDDGRVTDSKGNVVNFCNCVIIFTSNVGSRDILDLAG--EPSRNEEMRSRVMAAMRQDFRPEFLNRLDEFVIFSALGKPQMRGITALELKKVQKRLADKRITLQATEEALDFLAEVGSDPVYGARPLKRAIQREVETPMAKGIIAGTFAPGDVVQASIDNERLALKV 855
BLAST of mRNA_H-elongata_contig10459.380.1 vs. uniprot
Match: A0A6H5KCM5_9PHAE (HSP100 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM5_9PHAE) HSP 1 Score: 667 bits (1720), Expect = 4.050e-231 Identity = 348/420 (82.86%), Postives = 384/420 (91.43%), Query Frame = 1
Query: 463 MEVLKDKQENLMRTWNEERGRVGKMQALKEKLDALKVEIEHAERGYDLNKAAELKYAVMPKLQKELEEEEDSVDLDD-DNTSSNGNRMLRDEVTPDDIAAIVASWTGIPPGKLMESEREKLLHLEDELHRRVIGQDEAVRVVAEAIQRSRAGLNDPNKPIASLIFLGPTGVGKTELCKALAAYMFDTEEAMVRIDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTDAIRQRPYSVVLFDEMEKAHPDVFNIMLQLLDDGRVTDSKGNVVNFCNSIVIFTSNVGGQTILDVSSNQDSGAREEMRSRVMAAMRDGFRPEFLNRIDEFVIFERLSVLDMRKITSLELKKVSGRLADKDVTLEATDAALDFLAEVGYDAAYGARPLKRAIQREVETVLAKRIISGEITPGVHLVADIINERLVI 1719
M L++KQE L + W+ ERGRVGK+Q LKEK+DALKVEIEHAERGYDLNKAAEL YAVMPKLQKELE EE +D D D+ + G+RMLRDEVTPDDIA++VASWTGIPPGKLM SER+KL++LED+LH+RV+GQDEAVRVV+EAIQRSRAGLNDP+KPIASLIFLGPTGVGKTELCKALAAYMFDTE+A+VRIDMSEYMEKF+VSRLVGAPPGYVGYEEGGQLTDAIRQRPYSVVLFDEMEKAHPDVFNIMLQLLDDGRVTDSKGNVVNFCN I+IFTSNVG Q+ILDVSS + GAREEMRSRVMAAMR+GFRPEFLNRIDEFVIF+RLS DMR I+ LELKKV+ RLAD+D+TLEA+D+ALDFL+ VGYD YGARPLKR IQREVETVLAKRIISGEI G LVAD+INERLVI
Sbjct: 1 MAELQEKQEGLTKAWDLERGRVGKVQTLKEKIDALKVEIEHAERGYDLNKAAELTYAVMPKLQKELEAEEAVLDKDGADSDTDGGSRMLRDEVTPDDIASVVASWTGIPPGKLMSSERDKLMNLEDKLHQRVVGQDEAVRVVSEAIQRSRAGLNDPDKPIASLIFLGPTGVGKTELCKALAAYMFDTEDALVRIDMSEYMEKFAVSRLVGAPPGYVGYEEGGQLTDAIRQRPYSVVLFDEMEKAHPDVFNIMLQLLDDGRVTDSKGNVVNFCNCIIIFTSNVGSQSILDVSSAEGGGAREEMRSRVMAAMREGFRPEFLNRIDEFVIFDRLSAEDMRHISRLELKKVTLRLADRDITLEASDSALDFLSTVGYDPVYGARPLKRTIQREVETVLAKRIISGEIASGEILVADVINERLVI 420
BLAST of mRNA_H-elongata_contig10459.380.1 vs. uniprot
Match: A0A7S3Y487_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y487_HETAK) HSP 1 Score: 633 bits (1633), Expect = 1.030e-215 Identity = 340/559 (60.82%), Postives = 416/559 (74.42%), Query Frame = 1
Query: 1 VSILRGLKERYEVHHGVRLQDAALVSAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEASQFINISHFMQ*IPQLH*YMVASAFKALEIIFNNLLVSPKTLL**F*IKFAQVTSKPQVIDEVDRRLIQLEMEKLSLRKEIRPDALKRVEQIDHEMEVLKDKQENLMRTWNEERGRVGKMQALKEKLDALKVEIEHAERGYDLNKAAELKYAVMPKLQKELEEEEDSVDLDDDNTSSNGNRMLRDEVTPDDIAAIVASWTGIPPGKLMESEREKLLHLEDELHRRVIGQDEAVRVVAEAIQRSRAGLNDPNKPIASLIFLGPTGVGKTELCKALAAYMFDTEEAMVRIDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTDAIRQRPYSVVLFDEMEKAHPDVFNIMLQLLDDGRVTDSKGNVVNFCNSIVIFTSNVGGQTILDVSSNQDSGAREEMRSRVMAAMRDGFRPEFLNRIDEFVIFERLSVLDMRKITSLELKKVSGRLADKDVTLEATDAALDFLAEVGYDAAYGARPLKRAIQREVETVLAKRIISGEITPG 1677
VSILRGLKERYEVHHGVR++DAALV+AA LSHRYI+DRFLPDKAIDLVDEAAA+LNIE +TSKP ++DE+DRRLIQLEMEKLSL ++ ++ R+ +D EM L+ +Q L + W ERGRV +++LKEK++ +K E+E AER Y+LNKAAELK+ +PKLQ+EL EE +++ + +L+DEVT DD+AA+V +WTG+P K++ +E EKLL LED LH RVIGQDEAVR VAEA+QRSRAGL+DP KPIASL+FLGPTGVGKTELCKALAA +FD+EEA+VRIDMSEYMEK +VSRLVGAPPGYVGY+EGGQLTDAIR RPY+VVLFDEMEKAHPDVFN+MLQLLDDGR+TDSKGN VNF N+++IFTSN+G ILDVS + D REEMR+RVM AM+ FRPEFLNR+DE+VIF+ L +R+I LEL+KV+ RLA+K++ L+ + ALD +AEVG+D YGARP+KRAIQRE ET LAK +I GE PG
Sbjct: 65 VSILRGLKERYEVHHGVRIRDAALVAAATLSHRYISDRFLPDKAIDLVDEAAARLNIE-----------------------------------------------------ITSKPLLVDEIDRRLIQLEMEKLSLASDVSRESGLRLAALDKEMAELRVRQGELTQRWEAERGRVDNLKSLKEKIEQVKKEVEAAEREYELNKAAELKFQTLPKLQQELAAEEAALE------AQPAGALLKDEVTADDVAAVVEAWTGVPATKMLAAEGEKLLRLEDRLHERVIGQDEAVRAVAEAVQRSRAGLSDPQKPIASLVFLGPTGVGKTELCKALAAQLFDSEEALVRIDMSEYMEKHTVSRLVGAPPGYVGYDEGGQLTDAIRTRPYAVVLFDEMEKAHPDVFNLMLQLLDDGRLTDSKGNTVNFRNTVIIFTSNIGSADILDVSGDPDQ--REEMRARVMGAMKAAFRPEFLNRVDEYVIFDSLRKDQLREIVRLELRKVTARLAEKEIQLKVAEDALDHVAEVGFDPVYGARPMKRAIQREFETPLAKALIGGEYPPG 562
BLAST of mRNA_H-elongata_contig10459.380.1 vs. uniprot
Match: UPI001687BBE9 (ATP-dependent chaperone ClpB n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI001687BBE9) HSP 1 Score: 622 bits (1605), Expect = 2.080e-207 Identity = 332/571 (58.14%), Postives = 421/571 (73.73%), Query Frame = 1
Query: 1 VSILRGLKERYEVHHGVRLQDAALVSAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEASQFINISHFMQ*IPQLH*YMVASAFKALEIIFNNLLVSPKTLL**F*IKFAQVTSKPQVIDEVDRRLIQLEMEKLSLRKEIRPDALKRVEQIDHEMEVLKDKQENLMRTWNEERGRVGKMQALKEKLDALKVEIEHAERGYDLNKAAELKYAVMPKLQKELEEEEDSVDLDDDNTSSNGNRMLRDEVTPDDIAAIVASWTGIPPGKLMESEREKLLHLEDELHRRVIGQDEAVRVVAEAIQRSRAGLNDPNKPIASLIFLGPTGVGKTELCKALAAYMFDTEEAMVRIDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTDAIRQRPYSVVLFDEMEKAHPDVFNIMLQLLDDGRVTDSKGNVVNFCNSIVIFTSNVGGQTILDVSSNQDSGAREEMRSRVMAAMRDGFRPEFLNRIDEFVIFERLSVLDMRKITSLELKKVSGRLADKDVTLEATDAALDFLAEVGYDAAYGARPLKRAIQREVETVLAKRIISGEITPGVHLVADIINERL 1713
+SILRGLKERYEVHHGV++ D+ALV+AA LS RYI+DRFLPDKAIDLVDEAAA+L +E +TSKP+ +DE+DR+++QLEME+LSLRKE P +L+R+E+++ ++ LK++Q +L W E+ + +QA+KE++D + VEI AER YDLN+AAELKY + L ++LEE E ++ ++G +LR+EVT DIA I++ WTGIP KL+ESE +KLLHLEDELHRRVIGQDEAV VA+AIQRSRAGL DPN+P+AS IFLGPTGVGKTEL KALAAY+FDTEEAMVRIDMSEYMEK +VSRL+GAPPGYVGY+EGGQLT+AIR+RPY+V+LFDE+EKAHPDVFN+MLQ+LDDGRVTD++G+ V+F N+I+I TSN+G Q ILD++ D G EEMRSRVM AMR+ FRPEFLNRIDE +IF L ++R+I L++ ++ RL D+ ++L+ +DAALDFLAEVGYD YGARPLKRAIQRE+ET +AK I+ E G + DI NERL
Sbjct: 349 ISILRGLKERYEVHHGVKISDSALVAAATLSTRYISDRFLPDKAIDLVDEAAARLKME-----------------------------------------------------ITSKPEELDEIDRKILQLEMERLSLRKESDPASLERLERLEKDLGNLKEEQHSLNAQWQSEKDVINTIQAIKEEIDRVNVEISQAERDYDLNRAAELKYGKLTDLHRQLEEAETQLEQ----AQTSGRTLLREEVTESDIAEIISKWTGIPISKLVESEMQKLLHLEDELHRRVIGQDEAVTAVADAIQRSRAGLADPNRPVASFIFLGPTGVGKTELAKALAAYLFDTEEAMVRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNVMLQILDDGRVTDAQGHTVDFKNTIIIMTSNIGSQYILDIAG--DEGRYEEMRSRVMEAMRNNFRPEFLNRIDEAIIFHGLQKSELRQIVKLQVARLEKRLGDRKMSLKLSDAALDFLAEVGYDPVYGARPLKRAIQRELETQIAKGILRAEFNDGDTIYVDIENERL 860
BLAST of mRNA_H-elongata_contig10459.380.1 vs. uniprot
Match: D8G5A1_9CYAN (Chaperone protein ClpB n=2 Tax=Oscillatoriales TaxID=1150 RepID=D8G5A1_9CYAN) HSP 1 Score: 621 bits (1602), Expect = 5.340e-207 Identity = 331/571 (57.97%), Postives = 424/571 (74.26%), Query Frame = 1
Query: 1 VSILRGLKERYEVHHGVRLQDAALVSAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEASQFINISHFMQ*IPQLH*YMVASAFKALEIIFNNLLVSPKTLL**F*IKFAQVTSKPQVIDEVDRRLIQLEMEKLSLRKEIRPDALKRVEQIDHEMEVLKDKQENLMRTWNEERGRVGKMQALKEKLDALKVEIEHAERGYDLNKAAELKYAVMPKLQKELEEEEDSVDLDDDNTSSNGNRMLRDEVTPDDIAAIVASWTGIPPGKLMESEREKLLHLEDELHRRVIGQDEAVRVVAEAIQRSRAGLNDPNKPIASLIFLGPTGVGKTELCKALAAYMFDTEEAMVRIDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTDAIRQRPYSVVLFDEMEKAHPDVFNIMLQLLDDGRVTDSKGNVVNFCNSIVIFTSNVGGQTILDVSSNQDSGAREEMRSRVMAAMRDGFRPEFLNRIDEFVIFERLSVLDMRKITSLELKKVSGRLADKDVTLEATDAALDFLAEVGYDAAYGARPLKRAIQREVETVLAKRIISGEITPGVHLVADIINERL 1713
+SILRGLKERYEVHHGV++ D+ALV+AA LS RYI+DRFLPDKAIDLVDEAAAKL +E +TSKP+ +DE+DR+++QLEME+LSL+KE P +++R+E+++ ++ K++Q L W E+G +G +Q +KE++D + +EI+ AER Y+LN+AAELKY + +LQK+LEE E + T + G +LR+EVT DIA I++ WTGIP KL+ESE +KLLHLEDELH+RVIGQDEAV VA+AIQRSRAGL DPN+P+AS IFLGPTGVGKTEL KALAAY+FDTE+AMVRIDMSEYMEK +VSRL+GAPPGYVGY+EGGQLT+AIR+RPY+V+LFDE+EKAHPDVFNIMLQ+LDDGRVTD++G+ V+F N+++I TSNVG Q ILDV G EEMRSRVM AMR FRPEFLNRIDE +IF+ LS ++R+I L++ ++ RLAD+ ++++ +D+ALDFLAEVGYD YGARPLKRAIQRE+ET +AK I+ G+ + G + DI NERL
Sbjct: 349 ISILRGLKERYEVHHGVKISDSALVAAATLSTRYISDRFLPDKAIDLVDEAAAKLKME-----------------------------------------------------ITSKPEELDEIDRKILQLEMERLSLQKESAPASIERLERLEKDLANFKEQQSALNGQWQAEKGVLGNIQKIKEQIDKVNIEIQQAEREYNLNRAAELKYGTLTELQKQLEEAETKLTA----TQTTGQTLLREEVTESDIAEIISKWTGIPISKLVESEMQKLLHLEDELHKRVIGQDEAVTAVADAIQRSRAGLADPNRPVASFIFLGPTGVGKTELAKALAAYLFDTEDAMVRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDAQGHTVDFKNAVIIMTSNVGSQYILDVG-----GDDEEMRSRVMEAMRGTFRPEFLNRIDETIIFQGLSKQELRQIVKLQIGRLDKRLADRKMSIKLSDSALDFLAEVGYDPVYGARPLKRAIQRELETQIAKSILRGDFSDGDTIFVDIENERL 857
BLAST of mRNA_H-elongata_contig10459.380.1 vs. uniprot
Match: A0A6J4PSP5_9CYAN (Chaperone protein ClpB n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A6J4PSP5_9CYAN) HSP 1 Score: 619 bits (1596), Expect = 4.940e-206 Identity = 331/571 (57.97%), Postives = 420/571 (73.56%), Query Frame = 1
Query: 1 VSILRGLKERYEVHHGVRLQDAALVSAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEASQFINISHFMQ*IPQLH*YMVASAFKALEIIFNNLLVSPKTLL**F*IKFAQVTSKPQVIDEVDRRLIQLEMEKLSLRKEIRPDALKRVEQIDHEMEVLKDKQENLMRTWNEERGRVGKMQALKEKLDALKVEIEHAERGYDLNKAAELKYAVMPKLQKELEEEEDSVDLDDDNTSSNGNRMLRDEVTPDDIAAIVASWTGIPPGKLMESEREKLLHLEDELHRRVIGQDEAVRVVAEAIQRSRAGLNDPNKPIASLIFLGPTGVGKTELCKALAAYMFDTEEAMVRIDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTDAIRQRPYSVVLFDEMEKAHPDVFNIMLQLLDDGRVTDSKGNVVNFCNSIVIFTSNVGGQTILDVSSNQDSGAREEMRSRVMAAMRDGFRPEFLNRIDEFVIFERLSVLDMRKITSLELKKVSGRLADKDVTLEATDAALDFLAEVGYDAAYGARPLKRAIQREVETVLAKRIISGEITPGVHLVADIINERL 1713
+SILRGLKERYEVHHGV++ D+ALV+AA LS RYI+DRFLPDKAIDLVDEAAAKL +E +TSKP+ +DE+DRR++QLEME+LSL+KE P + +R+E+++ E+ K++Q NL W E+ + ++Q++KE++D + +EI+ AER YDLN+AAELKY + LQ++L++ E + T ++G +LR+EVT DIA I++ WTGIP KL++SE EKLLHLEDELH RVIGQDEAV VA+AIQRSRAGL DPN+PIAS IFLGPTGVGKTEL KALAAYMFDTEEAMVRIDMSEYMEK SVSRL+GAPPGYVGY+EGGQLT+AIR+RPY+V+LFDE+EKAHPDVFN+MLQ+LDDGRVTDS+G V+F NS++I TSN+G Q ILDV+ D EMR RVM AMR+ FRPEFLNRIDE +IF L ++R+I L+++++ RLAD+ ++L +DAALDFLAEVG+D +GARPLKRAIQRE+ET +AK+I+ GE G + D+ NERL
Sbjct: 349 ISILRGLKERYEVHHGVKISDSALVAAATLSTRYISDRFLPDKAIDLVDEAAAKLKME-----------------------------------------------------ITSKPEELDEIDRRILQLEMERLSLQKETSPASKERLERLEKELADFKEEQANLNARWQSEKQMIDQIQSIKEEIDRVNIEIQEAERNYDLNRAAELKYGKLTDLQRQLQQAEAKLA----ETQTSGRSLLREEVTEADIAEIISKWTGIPITKLVQSEMEKLLHLEDELHHRVIGQDEAVTAVADAIQRSRAGLADPNRPIASFIFLGPTGVGKTELGKALAAYMFDTEEAMVRIDMSEYMEKHSVSRLIGAPPGYVGYDEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNVMLQILDDGRVTDSQGRTVDFKNSVIIMTSNIGSQYILDVAG--DDSRYPEMRDRVMGAMRNSFRPEFLNRIDEVIIFHSLRKDELRQIVKLQVQRLKKRLADRKMSLRLSDAALDFLAEVGFDPVFGARPLKRAIQRELETQIAKQILRGEFNEGDTIFVDVENERL 860
BLAST of mRNA_H-elongata_contig10459.380.1 vs. uniprot
Match: K9VL08_9CYAN (Chaperone protein ClpB n=16 Tax=Cyanobacteria TaxID=1117 RepID=K9VL08_9CYAN) HSP 1 Score: 617 bits (1591), Expect = 2.450e-205 Identity = 329/571 (57.62%), Postives = 422/571 (73.91%), Query Frame = 1
Query: 1 VSILRGLKERYEVHHGVRLQDAALVSAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEASQFINISHFMQ*IPQLH*YMVASAFKALEIIFNNLLVSPKTLL**F*IKFAQVTSKPQVIDEVDRRLIQLEMEKLSLRKEIRPDALKRVEQIDHEMEVLKDKQENLMRTWNEERGRVGKMQALKEKLDALKVEIEHAERGYDLNKAAELKYAVMPKLQKELEEEEDSVDLDDDNTSSNGNRMLRDEVTPDDIAAIVASWTGIPPGKLMESEREKLLHLEDELHRRVIGQDEAVRVVAEAIQRSRAGLNDPNKPIASLIFLGPTGVGKTELCKALAAYMFDTEEAMVRIDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTDAIRQRPYSVVLFDEMEKAHPDVFNIMLQLLDDGRVTDSKGNVVNFCNSIVIFTSNVGGQTILDVSSNQDSGAREEMRSRVMAAMRDGFRPEFLNRIDEFVIFERLSVLDMRKITSLELKKVSGRLADKDVTLEATDAALDFLAEVGYDAAYGARPLKRAIQREVETVLAKRIISGEITPGVHLVADIINERL 1713
VSILRGLKERYEVHHGV++ D+ALV+AA LS RYI+DRFLPDKAIDLVDEAAAKL +E +TSKP+ +DE+DRR++QLEME+LSL+KE +++R+E+++ ++ LK++Q L W E+G +G +Q +KE++D + +EI+ AE YDLN+AAELKY+ + +LQK+L++ E + T + G +LR+EVT DIA I++ WTGIP KL+ESE +KLLHLEDELH+RVIGQDEAV VA+AIQRSRAGL DPN+P+AS IFLGPTGVGKTEL KALAAY+FDTEEA+VRIDMSEYMEK +VSRL+GAPPGYVGY+EGGQLT+A+R+RPYSV+LFDE+EKAHPDVFNIMLQ+LDDGRVTD++G+ V+F NS++I TSNVG Q ILDV+ G E MRSRVM AMR FRPEFLNRIDE +IF LS ++R+I L++K++ RLAD+ ++L+ +++A+DFLAE+GYD YGARPLKR IQRE+ET +AK I+ G+ G + DI NERL
Sbjct: 350 VSILRGLKERYEVHHGVKISDSALVAAATLSTRYISDRFLPDKAIDLVDEAAAKLKME-----------------------------------------------------ITSKPEELDEIDRRILQLEMERLSLQKESNVASIERLERLEKDLANLKEQQSALNAQWQSEKGVIGSIQKIKEQIDKVNIEIQQAELKYDLNRAAELKYSKLTELQKQLQQAESQLSA----TQTTGKTLLREEVTEGDIAEIISKWTGIPISKLVESEMQKLLHLEDELHKRVIGQDEAVTAVADAIQRSRAGLADPNRPVASFIFLGPTGVGKTELAKALAAYLFDTEEAIVRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNIMLQILDDGRVTDAQGHTVDFKNSVIIMTSNVGSQYILDVA-----GDNELMRSRVMEAMRGTFRPEFLNRIDEMIIFHGLSKTELRQIVLLQVKRLEKRLADRKMSLKLSESAIDFLAEIGYDPVYGARPLKRGIQRELETQMAKGILRGDFADGDTIFVDIENERL 858
BLAST of mRNA_H-elongata_contig10459.380.1 vs. uniprot
Match: UPI0019E8636C (AAA family ATPase n=2 Tax=Nostocales TaxID=1161 RepID=UPI0019E8636C) HSP 1 Score: 605 bits (1560), Expect = 6.470e-205 Identity = 323/571 (56.57%), Postives = 416/571 (72.85%), Query Frame = 1
Query: 1 VSILRGLKERYEVHHGVRLQDAALVSAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEASQFINISHFMQ*IPQLH*YMVASAFKALEIIFNNLLVSPKTLL**F*IKFAQVTSKPQVIDEVDRRLIQLEMEKLSLRKEIRPDALKRVEQIDHEMEVLKDKQENLMRTWNEERGRVGKMQALKEKLDALKVEIEHAERGYDLNKAAELKYAVMPKLQKELEEEEDSVDLDDDNTSSNGNRMLRDEVTPDDIAAIVASWTGIPPGKLMESEREKLLHLEDELHRRVIGQDEAVRVVAEAIQRSRAGLNDPNKPIASLIFLGPTGVGKTELCKALAAYMFDTEEAMVRIDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTDAIRQRPYSVVLFDEMEKAHPDVFNIMLQLLDDGRVTDSKGNVVNFCNSIVIFTSNVGGQTILDVSSNQDSGAREEMRSRVMAAMRDGFRPEFLNRIDEFVIFERLSVLDMRKITSLELKKVSGRLADKDVTLEATDAALDFLAEVGYDAAYGARPLKRAIQREVETVLAKRIISGEITPGVHLVADIINERL 1713
+SILRGLKERYE+HHGV++ D+ALV+AA LS RYI+DRFLPDKAIDLVDEAAA+L +E +TSKP+ +DE+DR+++QLEME+LSL+KE + +R+E+++ E+ LK++Q L W E+ + K+Q++KE++D + +EI+ AER YDLN+AAE KY + L ++LE E + +G +LR+EVT DIA +++ WTGIP KL+ESE+EKLLHLEDELH+RVIGQDEAV VA+AIQRSRAGL DPN+PIAS IFLGPTGVGKTEL KALAAY+FDTEEAMVRIDMSEYMEK +VSRL+GAPPGYVGYEEGGQLT+AIR+RPY+VVLFDE+EKAHPDVFNI+LQ+LDDGRVTD++G+ V+F N+I+I TSN+G Q ILD++ D +EMR RVM AMR+ FRPEFLNR+DE +IF L ++RKI L++ ++ RL D+ ++L+ ++AALDFLAEVGYD +GARPLKRAIQRE+ET +AK I+ GE G + D+ NERL
Sbjct: 52 ISILRGLKERYELHHGVKISDSALVAAATLSSRYISDRFLPDKAIDLVDEAAARLKME-----------------------------------------------------ITSKPEELDEIDRKILQLEMERLSLQKESNAASRERLEKLEKELADLKEEQRALNAQWQSEKDIITKIQSVKEEIDRVNLEIQQAERNYDLNRAAEFKYGKLTDLHRKLEAAESELTQ----AQRSGKSLLREEVTESDIAEVISKWTGIPISKLVESEKEKLLHLEDELHQRVIGQDEAVTAVADAIQRSRAGLADPNRPIASFIFLGPTGVGKTELGKALAAYLFDTEEAMVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAIRRRPYAVVLFDEIEKAHPDVFNILLQILDDGRVTDAQGHTVDFKNTIIIMTSNIGSQFILDLAG--DDSRYDEMRHRVMEAMRNSFRPEFLNRVDEIIIFHGLQKEELRKIVQLQVNRLQQRLGDRKMSLKLSNAALDFLAEVGYDPVFGARPLKRAIQRELETPIAKAILRGEFNDGDTIFVDVENERL 563
BLAST of mRNA_H-elongata_contig10459.380.1 vs. uniprot
Match: A0A4V0XUS2_PLAAG (Chaperone protein ClpB n=15 Tax=Oscillatoriales TaxID=1150 RepID=A0A4V0XUS2_PLAAG) HSP 1 Score: 616 bits (1588), Expect = 7.560e-205 Identity = 333/572 (58.22%), Postives = 423/572 (73.95%), Query Frame = 1
Query: 1 VSILRGLKERYEVHHGVRLQDAALVSAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEASQFINISHFMQ*IPQLH*YMVASAFKALEIIFNNLLVSPKTLL**F*IKFAQVTSKPQVIDEVDRRLIQLEMEKLSLRKEIRPDALKRVEQIDHEMEVLKDKQENLMRTWNEERGRVGKMQALKEKLDALKVEIEHAERGYDLNKAAELKYAVMPKLQKELEEEEDSVDLDDDNTSSNGNRMLRDEVTPDDIAAIVASWTGIPPGKLMESEREKLLHLEDELHRRVIGQDEAVRVVAEAIQRSRAGLNDPNKPIASLIFLGPTGVGKTELCKALAAYMFDTEEAMVRIDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTDAIRQRPYSVVLFDEMEKAHPDVFNIMLQLLDDGRVTDSKGNVVNFCNSIVIFTSNVGGQTILDVSSNQDSGAREEMRSRVMAAMRDGFRPEFLNRIDEFVIFERLSVLDMRKITSLELKKVSGRLADKDVTLEATDAALDFLAEVGYDAAYGARPLKRAIQREVETVLAKRIISGEITPGVHLVADIINERLV 1716
+SILRGLKERYEVHHGV++ D+ALV+AA LS RYI+DRFLPDKAIDLVDE+AAKL +E +TSKP+ +DE+DRR++QLEME+LSL+KE +L+R+E+I+ E+ LK +Q++L W E+ + +Q++KE++D + +EI+ AER YDLN+AAELKY M +L+K+L+ E ++ NT +G +LR+EVT DIA I++ WTGIP KL+ESE +KLL LEDELH RVIGQDEAV VA+AIQRSRAGL+DPN+P+AS IFLGPTGVGKTEL KALA+Y+FDTEEAMVRIDMSEYMEK +VSRL+GAPPGYVGY+EGGQLT+AIR+RPY+V+LFDE+EKAHPDVFNIMLQ+LDDGRVTD++G+ V+F NSI+I TSNVG Q ILDVS + EEMRSRV+ AMR FRPEFLNRIDE +IF L ++R+I L+++++S RL ++ +TL+ +D+ALDFLAEVGYD YGARPLKRAIQRE+ET +AK I+ E G + DI NERLV
Sbjct: 349 ISILRGLKERYEVHHGVKISDSALVAAAVLSTRYISDRFLPDKAIDLVDESAAKLKME-----------------------------------------------------ITSKPEQLDEIDRRILQLEMERLSLKKESDAASLERLERIETELGTLKQEQQSLSSQWQSEKKVITDIQSIKEEIDRVNIEIQQAERNYDLNRAAELKYGKMEELKKKLKAIEAQLE----NTQISGKTLLREEVTEADIAEIISKWTGIPISKLVESEMQKLLTLEDELHHRVIGQDEAVTAVADAIQRSRAGLSDPNRPVASFIFLGPTGVGKTELAKALASYLFDTEEAMVRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAIRRRPYTVILFDEIEKAHPDVFNIMLQILDDGRVTDAQGHTVDFKNSIIIMTSNVGSQYILDVSGSDSQ--YEEMRSRVLEAMRASFRPEFLNRIDEMIIFHALQKSELRQIVCLQVERLSKRLVERKMTLKLSDSALDFLAEVGYDPVYGARPLKRAIQRELETPIAKAILRSEFVNGDTIFVDIENERLV 861 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10459.380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10459.380.1 >prot_H-elongata_contig10459.380.1 ID=prot_H-elongata_contig10459.380.1|Name=mRNA_H-elongata_contig10459.380.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=456bp MEKLSLRKEIRPDALKRVEQIDHEMEVLKDKQENLMRTWNEERGRVGKMQback to top mRNA from alignment at H-elongata_contig10459:2925..9039- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10459.380.1 ID=mRNA_H-elongata_contig10459.380.1|Name=mRNA_H-elongata_contig10459.380.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6115bp|location=Sequence derived from alignment at H-elongata_contig10459:2925..9039- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10459:2925..9039- >mRNA_H-elongata_contig10459.380.1 ID=mRNA_H-elongata_contig10459.380.1|Name=mRNA_H-elongata_contig10459.380.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2736bp|location=Sequence derived from alignment at H-elongata_contig10459:2925..9039- (Himanthalia elongata Himel1 dioecious)back to top |