mRNA_H-elongata_contig104430.366.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig104430.366.1 vs. uniprot
Match: A0A6H5LCN5_9PHAE (Utp12 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCN5_9PHAE) HSP 1 Score: 173 bits (439), Expect = 6.190e-48 Identity = 90/116 (77.59%), Postives = 104/116 (89.66%), Query Frame = 1
Query: 13 FQISHNRSLEGVLDELHSKRLTEAGSLDVLEA-SDSDGDRDSFQGAKL--PGVARGDDGS-RKTREEARSSCVRFSPTGREWAACTTDGLLLYSLDESTTFDPSELDESITPEAIQ 348
FQISHNRSL+GVLDELH+KRLTEAGSLD+LEA SDSDG+ + ++GA L PG RG DGS R+TREEARS+CVRFSPTGREWAACTTDGLLLYSLDE+ FDPS+LDE++TPEA+Q
Sbjct: 662 FQISHNRSLDGVLDELHNKRLTEAGSLDMLEAGSDSDGEGERYRGANLALPGAERGADGSSRRTREEARSTCVRFSPTGREWAACTTDGLLLYSLDEAAVFDPSDLDETVTPEAVQ 777
BLAST of mRNA_H-elongata_contig104430.366.1 vs. uniprot
Match: A0A2R5GPN5_9STRA (Guanine nucleotide-binding protein subunit beta-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GPN5_9STRA) HSP 1 Score: 125 bits (314), Expect = 4.950e-31 Identity = 61/119 (51.26%), Postives = 90/119 (75.63%), Query Frame = 1
Query: 1 LLFFFQISHNRSLEGVLDELHSKRLTEAGS---LDVLEASDSDGDRDSFQGAKLPGVARGDDGSRKTREEARSSCVRFSPTGREWAACTTDGLLLYSLDESTTFDPSELDESITPEAIQ 348
LL +Q+SHNRSL+G+LD+L S++LTEAG+ LD+ +ASDS+G+ + + LPG +RGD G R T+ E R CV+FSP G+EWAA TT+GL++Y+LD + FDP +L+E +TP+ ++
Sbjct: 634 LLKKYQLSHNRSLDGILDKLDSRKLTEAGNSDTLDLSDASDSEGEDMAARAKALPGASRGDLGKRITKPEIRCKCVQFSPNGQEWAAATTEGLMIYALDNAMLFDPFQLEEDVTPDRVR 752
BLAST of mRNA_H-elongata_contig104430.366.1 vs. uniprot
Match: A0A836CGV6_9STRA (Periodic tryptophan protein 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGV6_9STRA) HSP 1 Score: 124 bits (312), Expect = 9.250e-31 Identity = 68/132 (51.52%), Postives = 86/132 (65.15%), Query Frame = 1
Query: 13 FQISHNRSLEGVLDELHSKRLTEAGSLDVLEASDSDGDRDSFQGAKLPGVARGDDGSRK----------------------TREEARSSCVRFSPTGREWAACTTDGLLLYSLDESTTFDPSELDESITPEA 342
FQ+SHNRSLEG+LDELHS RLTE GSLD+L ASDS+G+ G LPG RG++G R+ T+E R++CVRFSPTG+EWAA T G+LL++LD+ T F P++LDE TP A
Sbjct: 616 FQVSHNRSLEGILDELHSGRLTEGGSLDLLPASDSEGEGRG-SGGGLPGAKRGNEGKRQPAHILTACLNARPRCCFRCRAQTKEAVRTTCVRFSPTGQEWAAATPHGVLLFALDDVTAFTPTDLDEDATPAA 746
BLAST of mRNA_H-elongata_contig104430.366.1 vs. uniprot
Match: A0A7S4N7D1_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N7D1_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.030e-29 Identity = 65/116 (56.03%), Postives = 80/116 (68.97%), Query Frame = 1
Query: 1 LLFFFQISHNRSLEGVLDELHSKRLTEAGSLDVLEASDSDGDRDSFQGAKLPGVARGDDGSRKTREEARSSCVRFSPTGREWAACTTDGLLLYSLDESTTFDPSELDESITPEAIQ 348
LL FQIS NRSL+GVLDEL+SK L E G LD + SD + D F +LPG RGDDGSR TR E ++ V FSPTGREW+A + +GL +YSLD+ FDP L E++TP A+Q
Sbjct: 464 LLKKFQISFNRSLDGVLDELNSKNLGEGGPLDDRDGSDDEAD---FSSGRLPGAKRGDDGSRSTRVEVLTTSVAFSPTGREWSAVSGEGLHVYSLDDDMIFDPIALTEAVTPSAVQ 576
BLAST of mRNA_H-elongata_contig104430.366.1 vs. uniprot
Match: A0A2D0XKL4_9BASI (Utp12 domain-containing protein n=1 Tax=Bartheletia paradoxa TaxID=669517 RepID=A0A2D0XKL4_9BASI) HSP 1 Score: 120 bits (301), Expect = 2.800e-29 Identity = 61/114 (53.51%), Postives = 80/114 (70.18%), Query Frame = 1
Query: 13 FQISHNRSLEGVLDELHSKRLTEAGSLDVLEASDSDGDRDSFQGAKLPGVARGDDGSRKTREEARSSCVRFSPTGREWAACTTDGLLLYSLDESTTFDPSELDESITPEAIQVT 354
FQISHN SL+G + L S+ +TEAG L +++ + + D + LPGV RGD R+TR+EAR+ VRFSPTGR WAA +T+GLL+YSLDES FDP +LD ITP++I T
Sbjct: 626 FQISHNLSLDGTQEFLDSRNMTEAGPLSLVDTAGDESDLEDRIDRTLPGVGRGDLSKRRTRQEARTKAVRFSPTGRSWAAASTEGLLVYSLDESLVFDPFDLDMDITPQSIVAT 739
BLAST of mRNA_H-elongata_contig104430.366.1 vs. uniprot
Match: A0A0G4J7J5_PLABS (Utp12 domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J7J5_PLABS) HSP 1 Score: 119 bits (298), Expect = 7.070e-29 Identity = 62/116 (53.45%), Postives = 85/116 (73.28%), Query Frame = 1
Query: 13 FQISHNRSLEGVLDELHSKRLTEAGSLDVLEASDSDGD----RDSFQGAKLPGVARGDDGSRK-TREEARSSCVRFSPTGREWAACTTDGLLLYSLDESTTFDPSELDESITPEAI 345
FQIS NR+L+G++D L+S ++T+AG +D ++ SDSD D R + + A LPGVA+GD R+ TR + CVRFSPTGR WAA +T+GLL+YSLD+ TFDP ++DE +TPE I
Sbjct: 596 FQISSNRALDGIVDMLNSGKMTDAGPVDEIDDSDSDEDTAGARAARRDANLPGVAKGDLSKRRATRPAVATKCVRFSPTGRSWAAASTEGLLVYSLDQDMTFDPVDIDEDVTPERI 711
BLAST of mRNA_H-elongata_contig104430.366.1 vs. uniprot
Match: A0A1Y1WFS9_9FUNG (WD40 repeat-like protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WFS9_9FUNG) HSP 1 Score: 119 bits (298), Expect = 7.100e-29 Identity = 60/116 (51.72%), Postives = 81/116 (69.83%), Query Frame = 1
Query: 1 LLFFFQISHNRSLEGVLDELHSKRLTEAGSLDVLEASDSDGDRDSFQGAKLPGVARGDDGSRKTREEARSSCVRFSPTGREWAACTTDGLLLYSLDESTTFDPSELDESITPEAIQ 348
LL FQ+S N SL+GV ++L+SK +TEAG D++++ D D + LPGV GD +R R E R+ VRFSPTGR+WAA +T+GL++YSLDE+ FDP ELDE +TPE I+
Sbjct: 592 LLRKFQVSKNLSLDGVQEKLNSKNMTEAGPADLIDSDGIDSDTEKAADNSLPGVRSGDKSNRVLRPEVRTRDVRFSPTGRQWAAASTEGLMIYSLDETLVFDPYELDEDVTPETIR 707
BLAST of mRNA_H-elongata_contig104430.366.1 vs. uniprot
Match: A0A165ITB7_9BASI (WD40 repeat-like protein n=2 Tax=Calocera TaxID=29888 RepID=A0A165ITB7_9BASI) HSP 1 Score: 119 bits (298), Expect = 7.100e-29 Identity = 56/111 (50.45%), Postives = 80/111 (72.07%), Query Frame = 1
Query: 13 FQISHNRSLEGVLDELHSKRLTEAGSLDVLEASDSDGDRDSFQGAKLPGVARGDDGSRKTREEARSSCVRFSPTGREWAACTTDGLLLYSLDESTTFDPSELDESITPEAI 345
+QIS N SLEG + L S+++TEAG++D+++ D D Q +LPG RGD G R+ R+EAR+ C+RFSPTGR WAA +T+GLL+YS D+ TFDP +LD +TP+++
Sbjct: 618 YQISQNLSLEGTEEFLDSRKITEAGNVDLIDRQGDASDLDDRQDPRLPGAQRGDLGKRRYRQEARTKCIRFSPTGRSWAAASTEGLLIYSTDDGITFDPFDLDIELTPQSL 728
BLAST of mRNA_H-elongata_contig104430.366.1 vs. uniprot
Match: A0A060S832_PYCCI (Utp12 domain-containing protein n=4 Tax=Trametes TaxID=5324 RepID=A0A060S832_PYCCI) HSP 1 Score: 119 bits (297), Expect = 9.690e-29 Identity = 57/111 (51.35%), Postives = 81/111 (72.97%), Query Frame = 1
Query: 13 FQISHNRSLEGVLDELHSKRLTEAGSLDVLEASDSDGDRDSFQGAKLPGVARGDDGSRKTREEARSSCVRFSPTGREWAACTTDGLLLYSLDESTTFDPSELDESITPEAI 345
FQIS N SL+G + L S+++TEAG++D+++ + D + LPG RGD R+ R+EAR+ CVRF+PTGR WAA +T+GLL+YS+DESTTFDP +LD +TP+A+
Sbjct: 621 FQISQNLSLDGTEEFLDSRKVTEAGNIDLIDDRGDESDLEDRLDTALPGAQRGDMSKRRYRQEARTKCVRFAPTGRAWAAASTEGLLIYSVDESTTFDPFDLDIELTPQAL 731
BLAST of mRNA_H-elongata_contig104430.366.1 vs. uniprot
Match: A0A1Y2HWL2_9FUNG (Putative WD repeat protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HWL2_9FUNG) HSP 1 Score: 118 bits (296), Expect = 1.320e-28 Identity = 62/117 (52.99%), Postives = 81/117 (69.23%), Query Frame = 1
Query: 13 FQISHNRSLEGVLDELHSKRLTEAGSLDVLEASDSD------GDRDSFQGAKLPGVARGDDGSRKTREEARSSCVRFSPTGREWAACTTDGLLLYSLDESTTFDPSELDESITPEAI 345
FQ+SHN +L+G+ D+L+S+R+TEAGS+D+LE D G R + Q KLPG +GD R T E R+SCVRF+PTGR WAA TT+GL++YSLD+ FDP +LD ITP I
Sbjct: 596 FQLSHNLTLDGIKDQLNSRRMTEAGSMDLLEREMDDEESEKLGHRKTKQ-LKLPGATKGDLSERTTHPEVRTSCVRFAPTGRAWAAATTEGLMVYSLDDKILFDPFDLDVDITPTTI 711 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig104430.366.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig104430.366.1 >prot_H-elongata_contig104430.366.1 ID=prot_H-elongata_contig104430.366.1|Name=mRNA_H-elongata_contig104430.366.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp MCWRLLTATGTGTASKGPNCQAWRAGMMVRERRERRRGRAALDLAPRGESback to top mRNA from alignment at H-elongata_contig104430:7..1051- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig104430.366.1 ID=mRNA_H-elongata_contig104430.366.1|Name=mRNA_H-elongata_contig104430.366.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1045bp|location=Sequence derived from alignment at H-elongata_contig104430:7..1051- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig104430:7..1051- >mRNA_H-elongata_contig104430.366.1 ID=mRNA_H-elongata_contig104430.366.1|Name=mRNA_H-elongata_contig104430.366.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=516bp|location=Sequence derived from alignment at H-elongata_contig104430:7..1051- (Himanthalia elongata Himel1 dioecious)back to top |