mRNA_H-elongata_contig1044.360.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1044.360.1 vs. uniprot
Match: D8LBY7_ECTSI (Heat shock protein 70 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBY7_ECTSI) HSP 1 Score: 167 bits (423), Expect = 4.430e-46 Identity = 87/127 (68.50%), Postives = 105/127 (82.68%), Query Frame = 1
Query: 1 ADGILHICTNNKQTAKKQSMIIQSSGGLGDAAIDKIGSDTEKHAEMDKEQRDFIEAKNNADSAVYGTEKNLMEHKDRILEGVKTEMQKAIDDVKMVQESEDAENINANVQAFQTAALKIGRDIYGNK 381
ADGILH+ +KQT K+QS++IQSSGGLG+A I+K+ D E+HAE DK++RD IEAKN+ADSAVYGTEKNL+EHKD+I E VK ++QKAID++K V ESEDAE I VQA QTAALKIG IYGNK
Sbjct: 520 ADGILHVGAKDKQTGKEQSIVIQSSGGLGEADIEKMVRDAEEHAEADKKRRDLIEAKNSADSAVYGTEKNLLEHKDKIPEDVKADVQKAIDELKAVMESEDAEQIKEKVQALQTAALKIGEAIYGNK 646
BLAST of mRNA_H-elongata_contig1044.360.1 vs. uniprot
Match: A0A7S2URZ1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URZ1_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.360e-26 Identity = 57/125 (45.60%), Postives = 86/125 (68.80%), Query Frame = 1
Query: 1 ADGILHICTNNKQTAKKQSMIIQSSGGLGDAAIDKIGSDTEKHAEMDKEQRDFIEAKNNADSAVYGTEKNLMEHKDRILEGVKTEMQKAIDDVKMVQESEDAENINANVQAFQTAALKIGRDIYG 375
ADGIL++ +K T K+Q++II+SSGGL + I+K+ D E +AE D +R IE+KN DS +Y TEK+L EHK+++ + VK E++KA++D K V++ +D E + A A A LKIG+ +YG
Sbjct: 524 ADGILNVSAKDKGTGKEQTIIIKSSGGLSEDDIEKMVRDAEANAEADATRRQVIESKNEIDSLIYSTEKSLTEHKEKLSDEVKAEIEKAVEDAKAVKDGDDLEELKAKTAALNEATLKIGQAVYG 648
BLAST of mRNA_H-elongata_contig1044.360.1 vs. uniprot
Match: W7U263_9STRA (Heat shock protein 70 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U263_9STRA) HSP 1 Score: 111 bits (278), Expect = 4.740e-26 Identity = 60/125 (48.00%), Postives = 81/125 (64.80%), Query Frame = 1
Query: 1 ADGILHICTNNKQTAKKQSMIIQSSGGLGDAAIDKIGSDTEKHAEMDKEQRDFIEAKNNADSAVYGTEKNLMEHKDRILEGVKTEMQKAIDDVKMVQESEDAENINANVQAFQTAALKIGRDIYG 375
ADGI+H+ +K T K+Q+++IQSSGGL + I + D E H D+E++ IEA+N ADS VY TEK+L EH ++ + VK E+Q I + K E EDAE + V+A Q AALKIG IYG
Sbjct: 518 ADGIMHVSAKDKGTGKEQAIVIQSSGGLNEDEIQNMVKDAEAHKAADEERKKLIEARNEADSLVYSTEKSLTEHGAKLSDEVKEEIQNTIAEAKKALEGEDAELLQEKVKALQQAALKIGEAIYG 642
BLAST of mRNA_H-elongata_contig1044.360.1 vs. uniprot
Match: A0A259JZR2_9SPHN (Molecular chaperone DnaK (Fragment) n=1 Tax=Erythrobacter sp. 34-65-8 TaxID=1970335 RepID=A0A259JZR2_9SPHN) HSP 1 Score: 104 bits (259), Expect = 7.770e-26 Identity = 56/124 (45.16%), Postives = 83/124 (66.94%), Query Frame = 1
Query: 1 ADGILHICTNNKQTAKKQSMIIQSSGGLGDAAIDKIGSDTEKHAEMDKEQRDFIEAKNNADSAVYGTEKNLMEHKDRILEGVKTEMQKAIDDVKMVQESEDAENINANVQAFQTAALKIGRDIY 372
A+GI+++ +K T K+Q + IQ+SGGL DA ID++ D EK AE DK++R+ EA+N ADS V+ TEK L EH D+I +K +++ AI + K E +DA IN+ QA A+K+G++IY
Sbjct: 7 ANGIVNVSAKDKGTGKEQQIRIQASGGLTDADIDQMVKDAEKFAEEDKQRREKAEARNQADSLVHATEKQLAEHGDKISADLKAQVEAAIAETKTALEGDDAGEINSKAQALTEVAMKMGQEIY 130
BLAST of mRNA_H-elongata_contig1044.360.1 vs. uniprot
Match: UPI001F00A05A (molecular chaperone DnaK n=1 Tax=Candidatus Cyrtobacter zanobii TaxID=1222017 RepID=UPI001F00A05A) HSP 1 Score: 110 bits (275), Expect = 1.150e-25 Identity = 55/124 (44.35%), Postives = 85/124 (68.55%), Query Frame = 1
Query: 1 ADGILHICTNNKQTAKKQSMIIQSSGGLGDAAIDKIGSDTEKHAEMDKEQRDFIEAKNNADSAVYGTEKNLMEHKDRILEGVKTEMQKAIDDVKMVQESEDAENINANVQAFQTAALKIGRDIY 372
A+GILH+ ++ T K+Q + IQSSGGL D+ IDK+ + E+HA+ D ++++ ++ KN ADS +Y TEKNL EH ++ +G K E++ AI +K S DAE++ + +QA TA++KIG IY
Sbjct: 475 ANGILHVSARDRATNKEQRITIQSSGGLSDSEIDKMVKEAEQHADEDNKRKELVDLKNQADSLIYNTEKNLREHAAKLSDGEKKEVEDAISSLKDSLSSGDAEDLKSKIQALTTASMKIGEKIY 598
BLAST of mRNA_H-elongata_contig1044.360.1 vs. uniprot
Match: A0A257YIM8_9SPHN (Chaperone protein DnaK n=9 Tax=Sphingomonadales TaxID=204457 RepID=A0A257YIM8_9SPHN) HSP 1 Score: 109 bits (273), Expect = 2.170e-25 Identity = 60/124 (48.39%), Postives = 84/124 (67.74%), Query Frame = 1
Query: 1 ADGILHICTNNKQTAKKQSMIIQSSGGLGDAAIDKIGSDTEKHAEMDKEQRDFIEAKNNADSAVYGTEKNLMEHKDRILEGVKTEMQKAIDDVKMVQESEDAENINANVQAFQTAALKIGRDIY 372
A+GI+++ +K T K+Q + IQ+SGGL DA ID++ D EK AE DK++RD EAKNNADS V+ TEK L EH D+I G+K+E++ AI + K + +D E I A QA A+K+G+ IY
Sbjct: 479 ANGIVNVSAKDKGTGKEQQIRIQASGGLSDADIDQMVRDAEKFAEEDKKRRDSAEAKNNADSLVHATEKQLAEHGDKIDAGLKSEIESAIAETKTALQGDDVEAIKAKAQALTDLAMKMGQAIY 602
BLAST of mRNA_H-elongata_contig1044.360.1 vs. uniprot
Match: A0A2K3DDD4_CHLRE (Uncharacterized protein n=10 Tax=Chlamydomonadales TaxID=3042 RepID=A0A2K3DDD4_CHLRE) HSP 1 Score: 109 bits (272), Expect = 3.020e-25 Identity = 56/123 (45.53%), Postives = 86/123 (69.92%), Query Frame = 1
Query: 1 ADGILHICTNNKQTAKKQSMIIQSSGGLGDAAIDKIGSDTEKHAEMDKEQRDFIEAKNNADSAVYGTEKNLMEHKDRILEGVKTEMQKAIDDVKMVQESEDAENINANVQAFQTAALKIGRDI 369
A+GI+H+ +K T K+QS+ IQSSGGL D I+++ D E +AE DK +++ IEAKN AD+A+Y TEK+L E+K ++ + V E+QKAI + + +SED ++ A +QA TA++KIG +
Sbjct: 512 ANGIVHVSAKDKATGKEQSVRIQSSGGLSDDQINQMVRDAETYAEKDKTRKELIEAKNEADTAIYTTEKSLAEYKSKLPQAVVDEIQKAITECRAASQSEDLPDLKAKIQALSTASMKIGETL 634
BLAST of mRNA_H-elongata_contig1044.360.1 vs. uniprot
Match: B5YMV8_THAPS (Chaperone, heat shock protein 70 n=2 Tax=Thalassiosirales TaxID=33847 RepID=B5YMV8_THAPS) HSP 1 Score: 109 bits (272), Expect = 3.040e-25 Identity = 52/127 (40.94%), Postives = 91/127 (71.65%), Query Frame = 1
Query: 1 ADGILHICTNNKQTAKKQSMIIQSSGGLGDAAIDKIGSDTEKHAEMDKEQRDFIEAKNNADSAVYGTEKNLMEHKDRILEGVKTEMQKAIDDVKMVQESEDAENINANVQAFQTAALKIGRDIYGNK 381
ADGIL++ +K T K+Q++II+S GGL D I+++ D E +A+ D +++ IE+KN DS +Y TEK++ EH D++ E VKTE++KAI++ ++V++++D + + A +A A++K+G+ IYG +
Sbjct: 513 ADGILNVSAKDKGTGKEQNIIIKSCGGLSDDDIERMVRDAEVNADADAKKKQVIESKNEIDSLIYSTEKSVKEHADKLSEEVKTEVEKAIEEARLVKDNDDLDELKAKTEALSQASMKMGQAIYGQQ 639
BLAST of mRNA_H-elongata_contig1044.360.1 vs. uniprot
Match: K0SWS5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SWS5_THAOC) HSP 1 Score: 108 bits (269), Expect = 7.350e-25 Identity = 54/127 (42.52%), Postives = 89/127 (70.08%), Query Frame = 1
Query: 1 ADGILHICTNNKQTAKKQSMIIQSSGGLGDAAIDKIGSDTEKHAEMDKEQRDFIEAKNNADSAVYGTEKNLMEHKDRILEGVKTEMQKAIDDVKMVQESEDAENINANVQAFQTAALKIGRDIYGNK 381
ADGIL++ +K T K+Q++II+S GGL D I+++ D E +AE D +++ IEAKN DS +Y TEK+L EHKD++ + K E++KAI++ K V+ES++ + + + +A A++K+G+ IYG +
Sbjct: 459 ADGILNVSAKDKGTGKEQNIIIKSCGGLSDDDIERMVRDAEVNAEADAQKKQAIEAKNEIDSLIYSTEKSLNEHKDKLDDEAKKEVEKAIEEAKSVKESDNLDELKSKTEALSQASMKMGQAIYGQQ 585
BLAST of mRNA_H-elongata_contig1044.360.1 vs. uniprot
Match: D8S4L9_SELML (Uncharacterized protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S4L9_SELML) HSP 1 Score: 108 bits (269), Expect = 7.510e-25 Identity = 55/123 (44.72%), Postives = 87/123 (70.73%), Query Frame = 1
Query: 1 ADGILHICTNNKQTAKKQSMIIQSSGGLGDAAIDKIGSDTEKHAEMDKEQRDFIEAKNNADSAVYGTEKNLMEHKDRILEGVKTEMQKAIDDVKMVQESEDAENINANVQAFQTAALKIGRDI 369
A+GI+++ +K T K+Q++ IQSSGGL ++ I+K+ + E +++ DKE+++ I+AKN+ADSA+Y TEK+L EHKD++ V T +Q A+ D+K ESE + I + A QTAA+KIG +
Sbjct: 485 ANGIVNVSARDKSTGKEQAITIQSSGGLTESDIEKMVKEAEIYSQKDKERKELIDAKNDADSAIYSTEKSLNEHKDKLPSDVVTAIQSAVADLKKAVESEKVDQIRQKISATQTAAMKIGETL 607 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1044.360.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1044.360.1 >prot_H-elongata_contig1044.360.1 ID=prot_H-elongata_contig1044.360.1|Name=mRNA_H-elongata_contig1044.360.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=127bp ADGILHICTNNKQTAKKQSMIIQSSGGLGDAAIDKIGSDTEKHAEMDKEQback to top mRNA from alignment at H-elongata_contig1044:14887..15267+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1044.360.1 ID=mRNA_H-elongata_contig1044.360.1|Name=mRNA_H-elongata_contig1044.360.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=381bp|location=Sequence derived from alignment at H-elongata_contig1044:14887..15267+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1044:14887..15267+ >mRNA_H-elongata_contig1044.360.1 ID=mRNA_H-elongata_contig1044.360.1|Name=mRNA_H-elongata_contig1044.360.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=762bp|location=Sequence derived from alignment at H-elongata_contig1044:14887..15267+ (Himanthalia elongata Himel1 dioecious)back to top |