mRNA_H-elongata_contig104155.345.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig104155.345.1 vs. uniprot
Match: D7G248_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G248_ECTSI) HSP 1 Score: 196 bits (498), Expect = 6.360e-56 Identity = 102/130 (78.46%), Postives = 113/130 (86.92%), Query Frame = 1
Query: 4 LKHFNLYRKYYLGASPAQGDPEDSIRTNAIIFLGKVAAQLKPAVRDKILLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEVCAKVLPSVMPCLIDPGSEAVREAAFSCVETYLERLKEVSAKLKVQE 393
L N+ K + QGD EDSIRTNAIIFLGKVAAQL PAVRDK+LLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEVCAKVLP+VM CLIDPGSEAVREAAF+CV+TYL +L+EVS ++KV+E
Sbjct: 379 LSEKNMNDKLIKHLARLQGDAEDSIRTNAIIFLGKVAAQLSPAVRDKVLLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEVCAKVLPTVMLCLIDPGSEAVREAAFACVDTYLCKLREVSERMKVEE 508
BLAST of mRNA_H-elongata_contig104155.345.1 vs. uniprot
Match: A0A835ZEQ5_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEQ5_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.000e-40 Identity = 75/116 (64.66%), Postives = 90/116 (77.59%), Query Frame = 1
Query: 16 NLYRKYYLGASPAQGDPEDSIRTNAIIFLGKVAAQLKPAVRDKILLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEVCAKVLPSVMPCLIDPGSEAVREAAFSCVETYLERLK 363
N+ K + QGDPEDSIRTN IIFLGK+A +LKPAVRDK+LLPAFARG++DPF A RLAGLRATAAC + +VC +VLP VMPCL+D S AVREAAF+CVE YL +++
Sbjct: 427 NMNDKLIRHLARLQGDPEDSIRTNTIIFLGKIAGKLKPAVRDKVLLPAFARGIRDPFPAARLAGLRATAACAAYCEPMDVCTRVLPVVMPCLVDQASHAVREAAFACVELYLAKVR 542
BLAST of mRNA_H-elongata_contig104155.345.1 vs. uniprot
Match: A0A7S2PSF7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PSF7_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.070e-24 Identity = 64/133 (48.12%), Postives = 81/133 (60.90%), Query Frame = 1
Query: 4 LKHFNLYRKYYLGASPAQGDPEDSIRTNAIIFLGKVAAQLKPAVRDKILLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEVCAKVLPSVMPCLIDPGSEAVREAAFSCVETYLERLKEVSAKLKVQEKER 402
L H NL K Q DPE SIRTN +IF+GKVA L R K++LPAF R +KDPF RLA LRA AC ++F +EV KVLP V+P +D G+ VR AF+ V+T+L L+E S ++ E ER
Sbjct: 485 LNHANL-EKLVRYLVRLQADPEASIRTNTVIFIGKVAPHLTETSRQKLILPAFTRSMKDPFTPCRLAALRAVIACKEYFSQKEVAEKVLPCVIPHTLD-GANEVRAEAFNVVDTFLVNLREESKRMAKDEAER 615
BLAST of mRNA_H-elongata_contig104155.345.1 vs. uniprot
Match: B8C7X9_THAPS (Protein kinase domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7X9_THAPS) HSP 1 Score: 103 bits (257), Expect = 4.650e-23 Identity = 57/116 (49.14%), Postives = 76/116 (65.52%), Query Frame = 1
Query: 55 QGDPEDSIRTNAIIFLGKVAAQLKPAVRDKILLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEVCAKVLPSVMPCLIDPGSEAVREAAFSCVETYLERLKEVSAKLKVQEKER 402
Q DPE SIRTN +IF+GKVA L R K++LPAF R +KDPF RL+ L+A +C Q+F ++V KVLPS++P L+D ++ VR AF VET + LKE S ++ E ER
Sbjct: 509 QADPEASIRTNTVIFIGKVAPNLTDMSRQKLILPAFTRAMKDPFTPCRLSALKAVISCKQYFTQKDVAEKVLPSIVPHLLDSTND-VRVEAFKVVETLMGGLKEESQRMTKDEAER 623
BLAST of mRNA_H-elongata_contig104155.345.1 vs. uniprot
Match: A0A7S2EPS3_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EPS3_TRICV) HSP 1 Score: 99.8 bits (247), Expect = 6.840e-23 Identity = 55/109 (50.46%), Postives = 70/109 (64.22%), Query Frame = 1
Query: 55 QGDPEDSIRTNAIIFLGKVAAQLKPAVRDKILLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEVCAKVLPSVMPCLIDPGSEAVREAAFSCVETYLERLKEVSAKL 381
Q DPE SIRTN +IF+GK+A QL VR K++LPAFAR +KD F RLA LRA AC F +V KVLP+V P L+D +E VR AF E+ +E L+ S ++
Sbjct: 92 QSDPESSIRTNTVIFIGKIAPQLGDVVRSKLILPAFARAMKDEFPPCRLAALRAVRACKGLFSPGDVAGKVLPAVAPHLVDTAAE-VRAEAFGAAESMMEGLRAESQRM 199
BLAST of mRNA_H-elongata_contig104155.345.1 vs. uniprot
Match: A0A7S2U6Q9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U6Q9_9STRA) HSP 1 Score: 101 bits (252), Expect = 2.130e-22 Identity = 55/114 (48.25%), Postives = 76/114 (66.67%), Query Frame = 1
Query: 55 QGDPEDSIRTNAIIFLGKVAAQLKPAVRDKILLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEVCAKVLPSVMPCLIDPGSEAVREAAFSCVETYLERLKEVSAKLKVQEK 396
QGD E SIRTN +IF+GK+A+ L R +++LPAF R +KDPF RLA LRA C +FR ++V AKVLP V+P L+D E VR+ AF+ V+ ++ L+ S + +QEK
Sbjct: 465 QGDAESSIRTNTVIFIGKIASHLSDTSRQRLILPAFTRAMKDPFTPCRLAALRAVLHCRVYFRPKDVAAKVLPCVVPHLMDSVQE-VRKEAFAVVDEFMIVLRAESQTMALQEK 577
BLAST of mRNA_H-elongata_contig104155.345.1 vs. uniprot
Match: K0TA70_THAOC (Protein kinase domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TA70_THAOC) HSP 1 Score: 101 bits (251), Expect = 2.960e-22 Identity = 54/116 (46.55%), Postives = 75/116 (64.66%), Query Frame = 1
Query: 55 QGDPEDSIRTNAIIFLGKVAAQLKPAVRDKILLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEVCAKVLPSVMPCLIDPGSEAVREAAFSCVETYLERLKEVSAKLKVQEKER 402
Q DPE SIRTN +IF+GK+A L R K++LPAF R +KDPF RL+ LRA +C ++F +V KVLPSV+P +D ++ VR AF V+ L L+E S K+ +E++R
Sbjct: 568 QADPEASIRTNTVIFIGKIAPNLTEMSRQKLILPAFTRAMKDPFTPCRLSALRAVISCKEYFSQRDVADKVLPSVVPYTLDAAND-VRSEAFGVVDALLVGLREESQKMSKEEQDR 682
BLAST of mRNA_H-elongata_contig104155.345.1 vs. uniprot
Match: A0A1Y1VQV0_9FUNG (ARM repeat-containing protein n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1VQV0_9FUNG) HSP 1 Score: 95.1 bits (235), Expect = 4.370e-20 Identity = 51/109 (46.79%), Postives = 70/109 (64.22%), Query Frame = 1
Query: 55 QGDPEDSIRTNAIIFLGKVAAQLKPAVRDKILLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEVCAKVLPSVMPCLIDPGSEAVREAAFSCVETYLERLKEVSAKL 381
Q D E IRTN I +GK+A L P+ R +IL+PAFAR +KDPFV R AGL A A F EE+ +K++P PCLIDP + VR+ AF + TY+++L+ S ++
Sbjct: 446 QVDEEPGIRTNTTILIGKLAKNLNPSTRKRILIPAFARSLKDPFVPARNAGLLAFNASADLFDVEEMASKIIPCASPCLIDPD-KTVRQNAFKVLNTYIKKLEHNSEQM 553
BLAST of mRNA_H-elongata_contig104155.345.1 vs. uniprot
Match: A0A1Z5JFM6_FISSO (SCY1-like protein 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JFM6_FISSO) HSP 1 Score: 92.0 bits (227), Expect = 5.050e-19 Identity = 51/109 (46.79%), Postives = 68/109 (62.39%), Query Frame = 1
Query: 55 QGDPEDSIRTNAIIFLGKVAAQLKPAVRDKILLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEVCAKVLPSVMPCLIDPGSEAVREAAFSCVETYLERLKEVSAKL 381
Q DPE IRTN +I GK+A L R K+LLPAFAR +KDPF+ RL+ L+ Q F E+ KVLP+V P L+D GS+ VR+ AF ++ +L LK+ S K+
Sbjct: 445 QSDPEQGIRTNTVIVFGKLAPFLTEVSRQKLLLPAFARALKDPFIPCRLSALKCLLKVKQFFTPAEIAGKVLPAVSPFLLD-GSKDVRKEAFLVLDDFLFSLKQESEKM 552
BLAST of mRNA_H-elongata_contig104155.345.1 vs. uniprot
Match: A0A1Y3NLR2_PIRSE (Protein kinase domain-containing protein (Fragment) n=2 Tax=Piromyces TaxID=4821 RepID=A0A1Y3NLR2_PIRSE) HSP 1 Score: 90.9 bits (224), Expect = 1.260e-18 Identity = 49/109 (44.95%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 55 QGDPEDSIRTNAIIFLGKVAAQLKPAVRDKILLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEVCAKVLPSVMPCLIDPGSEAVREAAFSCVETYLERLKEVSAKL 381
Q D E IRTN I +GK+A L P+ R +IL+PA+AR +KDPFV R AGL A A F EE+ KV+P V PCL+DP + VR+ F + T +++L++ S ++
Sbjct: 445 QVDEEPGIRTNTTILIGKLAKNLNPSTRKRILIPAYARSLKDPFVPARNAGLLAFNASIDLFDVEEMATKVIPCVSPCLVDPD-KTVRQNGFKTIATCIKKLEQNSEQM 552 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig104155.345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig104155.345.1 >prot_H-elongata_contig104155.345.1 ID=prot_H-elongata_contig104155.345.1|Name=mRNA_H-elongata_contig104155.345.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp MLKHFNLYRKYYLGASPAQGDPEDSIRTNAIIFLGKVAAQLKPAVRDKILback to top mRNA from alignment at H-elongata_contig104155:213..1077+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig104155.345.1 ID=mRNA_H-elongata_contig104155.345.1|Name=mRNA_H-elongata_contig104155.345.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=865bp|location=Sequence derived from alignment at H-elongata_contig104155:213..1077+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig104155:213..1077+ >mRNA_H-elongata_contig104155.345.1 ID=mRNA_H-elongata_contig104155.345.1|Name=mRNA_H-elongata_contig104155.345.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=816bp|location=Sequence derived from alignment at H-elongata_contig104155:213..1077+ (Himanthalia elongata Himel1 dioecious)back to top |