mRNA_H-elongata_contig10389.328.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig10389.328.1 vs. uniprot
Match: D8LSN2_ECTSI (Conserved oligomeric Golgi complex subunit 5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSN2_ECTSI) HSP 1 Score: 735 bits (1898), Expect = 1.560e-245 Identity = 560/1012 (55.34%), Postives = 625/1012 (61.76%), Query Frame = 1
Query: 226 ASAESVSSQAEITLDSMSAHISRIEAAIRAHILDNEEDFLGSVGGVSELSRRTEEFRSGVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFLAALRRLKAQEEALGLDPSGCSGGGGXLSGRG----------------GADLRELAKAAQSLQELEGTLDEEEVAALDIVSRERPYVEACGAAVRRMSADHLARGMKGLNQTDVGGALQVFFNLGCLSARVKGCVTHLADEADAAASSALQPTALAESAAVGAASXXXXXXXXXXPCSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------RAHAGKLAASLYTTSMEAWGLQRVLSKKRDPTTRAILDAAVRGDRSAG------LGAGAYRAYWDGLCGAVRGAVVRALAADGVDFVGGXXXXXXXXXXXXALIAIYPSLRKAFLHLMTRLQQGTEGSIRVNGERGGGLTAVAAVAQGVPSE--------------GVGGIAARLGLGTTGVLGDSRWLSLALDDDDNDDLPLDA-----ELGQRERLGAGSEVRVGSASRSGDGRHISGLRRRTLRVDRVGATEGNKGIECSGVGGVDGARLLEALGPLRDLFLARSLVRLTTPVEQMFPQFDGYMAAVPSKHDLASFVRSIHNELALSVPVGSAAGGRQTADGSAVSDAEPGGGGGNVGG-GVEADLSLAPLLLRGVVKAVKLLCTKVEAMHSAEKTAFTFGGVSGGSGVGADEGTVGGAGDASTAAATG--------------------------SPRKAWTPSAEQEHNLQLLELVVKLREAMLGIPGLLVSEGEVSARGSAGGACRDQVAEAVKALDETASDVILEPYLSRVARSLEEKIAKMHRENFGSGAADATSALDGDGDHGSGSLFLLELQRALAALQADHFGRIAALRAPCAQASLRSLAARLLRSYVTHCALLRPLSEVGKARVAQDMATLEIALSPIARVSELSGVYQESKAFRTLLFVDDEDGGGRDS 3009
ASAESVSSQAEITLDSMS+HI+RIEAAIR+HILDNEEDFLGSVGGVSELSRRTEEFR GVR RFL+ALRRL+ QE+ LGL+ + X ADLRELAKAAQSLQELE TL + EVA L++V+RER YVEACGAAVRRMSAD LARGMK LNQTD+GGALQVFFNL CL ARVK CVTHLA EAD A S ALQP ALA++ + XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXX RAHAGKLAA+L+ TSMEAWGLQRVL KKRDPTTR +LDA VR DRSAG L AGAYRAYWDGLC AVRG+V RAL ADG VGGXXXXXX AL+A+YP LRKAFL L++RL++ T G G RL G+LG SRWL+LAL+DD N+ L LD E +R+ G+E G AS GR + GLR DGARLLEALGPLRDLFLARSL RLTTPVEQMFPQFDGYMAAVPSKHDLASF RSIH EL+L+VP GS G A GS +EAD SL P+LL+GVV+A +L CTKVEAM S EK A+TFGG S AA G +P +AW P+ EQEHNLQLLELVVKLREA+LGIP L++ A + G CR++VA+AV+ALD+ AS V LEPYLS VAR+ +KMHRENFG G + A SLFL ELQRALAALQADHF RIAALR P A+A+LRSLAAR+LR+YVTHCAL+RPLSE GKAR+AQDMATLEIALSP+ARVSEL VY ES+AFRTLLFVDD D G DS
Sbjct: 53 ASAESVSSQAEITLDSMSSHIARIEAAIRSHILDNEEDFLGSVGGVSELSRRTEEFRDGVRELRRSFARVQREVSEPHEAVRVRTQQLKNLHDATRLLKRALRFLSALRRLRGQEDVLGLEAAXXXXXXXXXXXXXXVGXXXXXXXXXXXXXAADLRELAKAAQSLQELESTLRDPEVAELEVVARERAYVEACGAAVRRMSADSLARGMKSLNQTDIGGALQVFFNLECLPARVKACVTHLAQEADEATSEALQPEALADATSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGRRSPATRDAGARRRTASMRAHAGKLAAALHGTSMEAWGLQRVLDKKRDPTTRTLLDATVRADRSAGGPGGLSLRAGAYRAYWDGLCRAVRGSVERALEADGA--VGGXXXXXXV-----ALVAMYPFLRKAFLRLISRLEEATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFWQRPGAVGQQQRL---AGGILGGSRWLALALEDDYNN-LSLDPSAAGDEEQERQWDRRGAEAGAGPAS----GRRVLGLRGGKXXXXXXXXXXXXXXXXXXXS---DGARLLEALGPLRDLFLARSLERLTTPVEQMFPQFDGYMAAVPSKHDLASFFRSIHAELSLAVPAGSV--GSAAATGSXXXXXXXXXXXXXXXXXSLEADFSLLPILLKGVVQAARLFCTKVEAMQSVEKGAYTFGGGSN--------------------AALGXXXXXXXXXXXXXXXXXXXXXXXXXXAPMEAWAPTLEQEHNLQLLELVVKLREALLGIPALVLPSPPTPAAAAYGVECRERVAKAVRALDDLASRVFLEPYLSGVARAXXXXXSKMHRENFGPGVS--AMAASEHXXXXXXSLFLHELQRALAALQADHFTRIAALRTPSAEAALRSLAARVLRAYVTHCALIRPLSEGGKARMAQDMATLEIALSPLARVSELGAVYLESRAFRTLLFVDDADDEGGDS 1022
BLAST of mRNA_H-elongata_contig10389.328.1 vs. uniprot
Match: W7U1N2_9STRA (Conserved oligomeric Golgi complex subunit 5 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1N2_9STRA) HSP 1 Score: 224 bits (570), Expect = 1.250e-56 Identity = 283/1043 (27.13%), Postives = 399/1043 (38.26%), Query Frame = 1
Query: 7 NASEILGRIEDDPVFRGFLEAGFDPAAFASKIVKADVGKAVAAATVAPVLLGKEGILRPSGSGTVSIDQHVAVASAESVSSQAEITLDSMSAHISRIEAAIRAHILDNEEDFLGSVGGVSELSRRTEEFRSGVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFLAALRRLKAQEEALGLDPSGCSGGGGXLSGRGGADLRELAKAAQSLQELEGTLDEEEVAALDIVSRERPYVEACGAAVRRMSADHLARGMKGLNQTDVGGALQVFFNLGCLSARVKGCVTHLADEADAAASSALQPTALAESAAVGAASXXXXXXXXXXPCSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAHAGKLAASLYTTSMEAWGLQRVLSKKRDPTTRAIL--------DAAVRGDR---------------------------SAGL----------GAGA-YRAYWDGLCGAVRGAVVRALAADGVDFVGGXXXXXXXXXXXXALIAIYPSLRKAFLHLMTRLQQGTEGSIRVNGERGGGLTAVAAVAQGVPSEGVGGIAARLGLGTTGVLGDS--RWLSLALDDDDNDDLPLDAELGQRERLGAGSEVRVGSASRSGDGRHISGLRRRTLRVDRVGATEGNKGIECSGVGGVDGARLLEALGPLRDLFLARSLVRLTTPVEQMFPQFDGYMAAVPSKHDLASFVRSIHNELALSVPVGSAAGGRQTADGSAVSDAEPGGGGGNVGGGVEADLSLAPLLLRGVVKAVKLLCTKVEAMHSAEKTAFTFGGVSGGSGVGADEGTVGGAGDASTAAATGSPRKAWTPSAEQEHNLQLLELVVKLREAMLGIPGLLVSEGEVSARGSAGGACRDQVAEAVKALDETASDVILEPYLSRVARSLEEKIAKMHRENFGSGAADATSALDGDGDHGSGSLFLLELQRALAALQADHFGRIAALRAPCAQASLRSLAARLLRSYVTHCALLRPLSEVGKARVAQDMATLEIALSPI-ARVSELSGVYQESKAFRTLLFVDDE 2988
N L + DP LE FD A+F++ +V D AT +P+ RPS S S+ E+ + ++ ++ +EAAI HIL ++++ + +G + EL + + RFL AL R+K +D + S R G +LR++AKAAQ L E+E L++ +A L +V+ ERPYV + G +RR L M +NQ D+ ALQVF NL L+ V C+ + E A AL P AL A V S SPP R H + A L +S++ W LQR L K D T L D A DR SAG+ G GA Y YW L +R RA + +A+ P + ++ H + L + + ++ L QG P GVL S R AL L L LG+ G SE + G I G +R+ + + E +G + EAL LRDL+L +SL RL P+EQMFP +GY AA+PSKHDL + +R + E+ SA+++ P L P +L+G+VKAV L C K+EAM + + A P + W E+EHNLQLL+LV L + +P L V G +C VAEAV AL+ A ++ PY+ +A L +A+MH EN+ A GD S F+ Q A+ AL+ H R L+ + ++LA RLLR YV+H AL+RPL+E GKA++ DMA LE AL + +++EL Y E KAFR L F DE
Sbjct: 35 NGKAFLVSLRRDPALAPLLEPHFDAASFSAHVVGTDNASG---ATGSPLRTASS--TRPS-----------------SARSRVEVMVAQLTEQLTIVEAAIEKHILQHQQELMQGMGDLGELRENCDVLTVRSKELRRSVKKLSAELLEPYKDTERRTQQLRRIHESNDILKKIARFLVALTRIKESSTLSNVDLAKED----PESARKGLELRDIAKAAQHLHEVEAILEDPALAELSLVTAERPYVASLGLGLRRTGMASLKAAMLSMNQADLDPALQVFHNLQHLAPVVLKCLAAMVAEGAEATRLALDPGAL--EAVVAPDSSVPRLSSTAPTSSPPASTATSQRQGSGEMEAIALRQRQVRI----RDHCDRWATVLLQSSLKVWSLQRALHMKTDAATNQDLLSIVLQSSDFARAADRVMALPSVASSSAAKGRTGSSENNTHIESAGVRDRARGWAPSGVGALYWLYWLELTAIIRSTTERA------------SRRASSVVAAPSSLAVAPIVN-SYPHFLRSLTDALDSLVDSTSKQCHSLL------QGAPH---------------GVLSRSQERGNPAAL-------LALVEALGE----GTSSEAQTGL---------IEGEEEHGPMSERLSPSSLSLAPETAGGSHEERTVGAEALRSLRDLYLGQSLQRLCRPIEQMFPSQEGYQAAIPSKHDLQALLRVMQTEVV-----------------SALAEGGP---------------LLLPHVLQGMVKAVYLFCAKIEAMINTGEGARKL-----------------------------YPLRGWMLGYEKEHNLQLLQLVALLHHGLQRLPQELAPAFRV------GVSCTKAVAEAVGALETLAVVNLVHPYMVDIATELGGTLAEMHLENY---APLPQEQEQGDKGQTMNSRFISTFQAAVEALRKHHLSRFP-LQCEFVSRAFKALAGRLLRLYVSHAALVRPLNEAGKAKITNDMAMLETALYSLHPKLAELGAPYLELKAFRELCFFGDE 920
BLAST of mRNA_H-elongata_contig10389.328.1 vs. uniprot
Match: A0A836CDX3_9STRA (Conserved oligomeric Golgi complex subunit 5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDX3_9STRA) HSP 1 Score: 196 bits (498), Expect = 1.640e-52 Identity = 139/373 (37.27%), Postives = 195/373 (52.28%), Query Frame = 1
Query: 1861 LLEALGPLRDLFLARSLVRLTTPVEQMFPQFDGYMAAVPSKHDLASFVRSIHNELALSVPVGSAAGGRQTADGSAVSDAEPGGGGGNVGGGVEADLSLAPLLLRGVVKAVKLLCTKVEAMHSAEKTAFTFGGVSGGSGVGADEGTVGGAGDASTAAATGSPRKAWTPSAEQEHNLQLLELVVKLREAMLGIPGLLVSEGEVSARG-------SAGGACRDQVAEAVKALDETASDVILEPYLSRVARSLEEKIAKMHRENFGS---GAADATSALDGDGDHGSGSLFLLELQRALAALQADHFGRIAALRAPCAQASLRSLAARLLRSYVTHCALLRPLSEVGKARVAQDMATLEIALSPIARVSELSGVYQE 2949
+L AL P+RD +L SL RLT PVEQMF DGYMAAVPSKHDLASFV+++ E A+ +DA V +SLAPL++RG KAVKL C+KV + ++ R W +A+Q HN+QLL L+ +LR A++ +P + V G+ + +G V A+KA+D A+ IL PYLS A +LE + MH+++F + G+A+ TS S ++L+LQRA+ +Q++H +AAL AP AQ LR L RL+RS+V+H AL+RP+ E GK ++A+DMA LE+ LS IA V+ L Y E
Sbjct: 1 MLVALAPVRDQYLLESLARLTKPVEQMFLHHDGYMAAVPSKHDLASFVKAMQAEAAV------------------ATDA------------VGGHVSLAPLVMRGAAKAVKLFCSKVSRLLASRSVR---------------------------------DRANWAKTADQTHNMQLLTLITQLRTAVVQLPSI-VKPGKPAQKGLDPEEVTQCAQEASTHVDAALKAIDALATGQILRPYLSAAAYALERVMGTMHKDSFANLEGGSAEQTSGA---------SAYMLDLQRAVGLVQSEHLKTVAALNAPYAQEMLRCLTDRLVRSFVSHAALVRPMEEAGKLKMARDMAMLEMCLSGIAPVATLGASYAE 300
BLAST of mRNA_H-elongata_contig10389.328.1 vs. uniprot
Match: A0A7S2B2D8_9STRA (Conserved oligomeric Golgi complex subunit 5 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B2D8_9STRA) HSP 1 Score: 169 bits (428), Expect = 7.250e-41 Identity = 131/378 (34.66%), Postives = 184/378 (48.68%), Query Frame = 1
Query: 1858 RLLEALGPLRDLFLARSLVRLTTPVEQMFPQFDGYMAAVPSKHDLASFVRSIHNELALSVPVGSAAGGRQTADGSAVSDAEPGGGGGNVGGGVEADLSLAPLLLRGVVKAVKLLCTKVEAMHSAEKTAFTFGGVSGGSGVGADEGTVGGAGDASTAAATGSPRKAWTPSAEQEHNLQLLELVVKLREAMLGIPGLLVSEGEVSARGSAGGACRDQVAEAVKALDETASDVILEPYLSRVARSLEEKIAKMHRENFGSGAADATSALDGDGDHGSGSLFLLELQRALAALQADHFGRIAA-LRAPCAQASLRSLAARLLRSYVTHCALLRPLSEVGKARVAQDMATLEIALSPIARVSELSGVYQESKAFRTLLFVDDE 2988
+LL AL P+R F+A+SL L PVEQMFP +GY A+PSKHD+ S +R + ELA + +LSL PL+LR +VKAV+ L TKVE M +A +G D T+ T EQ+HN+QLLE +V L + GI G ++ V + ++ AV AL+ A IL P +S +A +LE+ +AK+H +NFG G S + DG S FL + AL L+ +H R+ SLR LA RL RS+V++ AL+RPLSE G+ R+A+DMA E+ LS + L ++E +A R LLF+ +E
Sbjct: 100 QLLSALVPMRQRFMAKSLEALMRPVEQMFPNVEGYSNAIPSKHDVQSLMRIVDAELARATD----------------------------------ELSLMPLILRNLVKAVRFLSTKVEGMVYTSTSALVYG-------------------DKMTSQLT----------VEQDHNMQLLEFIVNLTSQLKGIVGAVLKGANVEPQEGDMKRFELCISPAVSALESLAKHQILRPAMSGMATTLEKHLAKVHDDNFGEGQP---SEVPEDGT----SKFLSDFDAALQVLRREHLSRLPRDTTTGVVGESLRDLARRLARSFVSNIALVRPLSEAGRLRLARDMAAFEMYLSSFYNLKGLGRSHEELRALRQLLFLGEE 407
BLAST of mRNA_H-elongata_contig10389.328.1 vs. uniprot
Match: A0A7S2RIQ0_9STRA (Conserved oligomeric Golgi complex subunit 5 (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RIQ0_9STRA) HSP 1 Score: 144 bits (363), Expect = 4.760e-33 Identity = 108/293 (36.86%), Postives = 155/293 (52.90%), Query Frame = 1
Query: 1861 LLEALGPLRDLFLARSLVRLTTPVEQMFPQFDGYMAAVPSKHDLASFVRSIHNELALSVPVGSAAGGRQTADGSAVSDAEPGGGGGNVGGGVEADLSLAPLLLRGVVKAVKLLCTKVEAMHSAEKTAFTFGGVSGGSGVGADEGTVGGAGDASTAAATGSPRKAWTPSAEQEHNLQLLELVVKLREAMLGIPGLLVSEGEVSAR-GSAGGACRDQVAEAVKALDETASDVILEPYLSRVARSLEEKIAKMHRENFGSGAADATSALDGDGDHGSGSLFLLELQRALAALQADH 2736
L+ AL PL +LFLA S LT PVEQMFP +GY A+PSKHD+ SF+R++ EL ++ G A SLAPLLLRGVV+ V + K+ M AFT+ GG G+ G G +G ++ ++ + EQEHNLQL+ L+ +L ++ +PGL+ +GE+ A +A AC++++A A+KAL+ A +L P ++ +AR+LEE +A+MH ENFG DA A G+ D GS +L Q L L +H
Sbjct: 199 LVSALRPLEELFLAHSKETLTRPVEQMFPDVEGYANAIPSKHDIQSFMRTVQGELDRAIHGGEA--------------------------------SLAPLLLRGVVQVVAYMARKIAGMVYMSPAAFTYSLGGGGDPSGSRSGGPG-SGSNGLPHSSDPSKEDGGLTPEQEHNLQLVALLSRLHGSLTSLPGLVFGDGELLADLAAAHQACQEELAPALKALERVARTHLLRPAMAAMARTLEECLARMHGENFGE---DANPAAAGEED---GSPYLQSFQAMLGHLAVEH 452
BLAST of mRNA_H-elongata_contig10389.328.1 vs. uniprot
Match: I2CR59_NANGC (Conserved oligomeric Golgi complex subunit 5 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR59_NANGC) HSP 1 Score: 109 bits (273), Expect = 2.320e-22 Identity = 90/267 (33.71%), Postives = 127/267 (47.57%), Query Frame = 1
Query: 2152 LAPLLLRGVVKAVKLLCTKVEAMHSAEKTAFTFGGVSGGSGVGADEGTVGGAGDASTAAATGSPRKAWTPSAEQEHNLQLLELVVKLREAMLGIPGLLVSEGEVSARGSAGGACRDQVAEAVKALDETASDVILEPYLSRVARSLEEKIAKMHRENFGSGAADATSALDGDGDHGSGSLFLLELQRALAALQADHFGRIAALRAPCAQASLRSLAARLLRSYVTHCALLRPLSEVGKARVAQDMATLEIALSPI-ARVSELSGVYQE 2949
L P +L+G+VKAV L C K+EAM + + A P + W E+EHNLQLL+LV L + +P L V G +C VAEAV AL+ A ++ PY+ +A L +A+MH +N+ A GD S F+ Q A+ AL+ H R L+ + ++LA RLLR YV+H AL+RPL+E GKA++ DMA LE AL + +++EL Y E
Sbjct: 92 LLPHVLQGMVKAVYLFCAKIEAMINTGEGARKL-----------------------------YPLRGWMLGYEKEHNLQLLQLVALLHHGLQRLPQELAPAFRV------GVSCTKAVAEAVGALETLAVVNLVHPYMVDIATELGGTLAEMHLKNY---APLPQEQEQGDKGQTMNSRFISTFQAAVEALRKHHLSRFP-LQCEFVSRAFKALAGRLLRLYVSHAALVRPLNEAGKAKITNDMAMLETALYSLHPKLAELGAPYLE 319
BLAST of mRNA_H-elongata_contig10389.328.1 vs. uniprot
Match: A0A8K1C6A0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6A0_PYTOL) HSP 1 Score: 110 bits (276), Expect = 5.070e-21 Identity = 106/399 (26.57%), Postives = 167/399 (41.85%), Query Frame = 1
Query: 1858 RLLEALGPLRDLFLARSLVRLTTPVEQMFPQFDGYMAAVPSKHDLASFVRSIHNELALSVPVGSAAGGRQTADGSAVSDAEPGGGGGNVGGGVEADLSLAPLLLRGVVKAVKLLCTKVEAMHSAEKTAFTFGGVSGGSGVGADEGTVGGAGDASTAAATGSPRKAWTPSAEQEHNLQLLELVVKLREAMLGIPGLLVSEGEVSARGSAGGACR-----DQVAEAVKALDETA-----------SDVILEPYLSRVARSLEEKIAKMHRENFGSGAADATSALDGDGDHG--------SGSLFLLELQRALAALQADHFGRIAALRAPCAQASLRSLAARLLRSYVTHCALLRPLSEVGKARVAQDMATLEIALSPIARVSELSGVYQESKAFRTLLFVD 2982
+LL+A+ PL D F+ R R+ +P+E MFPQ + + PS+ D+ + R+I E+ L V D L + + + KAV L CT + + + K A + +A Q HN+ LL + +L + + + L S +ARG+A + + Q+ + +KAL E IL PYL +A LE AKMH E+F AD T++ D G + GS ++ E + +H R+ ++ PC S+ + ARL+ ++ H AL+RPL E GK R+A DMA LE+ L + + L Y E +AFR L+F++
Sbjct: 454 QLLDAMTPLADAFIERCYRRIASPIELMFPQSANFHTSPPSRSDMQTLARTIFAEMEL----------------------------------VGHDAVLIERVSQQIHKAVHLFCTTSKKILNTGKAAVAL-------------------------------MPTYGRTANQAHNIALLSALYQLDDMITQLEARLGS----TARGNAQTSTKLVPSSTQLQKQIKALQEKEFAPCHEQIQELQYTILGPYLQALAGVLESIFAKMHDESF----ADQTTSRDARGANAPIPATNPTGGSRYMSEFSSVFNVIIEEHIRRMPSV--PCVTTSVSAFIARLMSVFIRHAALVRPLEENGKLRLANDMAQLELRLESVLPLRSLGAPYDELRAFRHLIFLE 777
BLAST of mRNA_H-elongata_contig10389.328.1 vs. uniprot
Match: A0A662XB50_9STRA (Conserved oligomeric Golgi complex subunit 5 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XB50_9STRA) HSP 1 Score: 106 bits (265), Expect = 1.080e-19 Identity = 111/421 (26.37%), Postives = 175/421 (41.57%), Query Frame = 1
Query: 1849 DGARLLEALGPLRDLFLARSLVRLTTPVEQMFPQFDGYMAAVPSKHDLASFVRSIHNELALSVPVGSAAGGRQTADGSAVSDAEPGGGGGNVGGGVEADLSLAPLLLRGVV----KAVKLLCTKVEA-MHSAEKTAFTFGGVSGGSGVGADEGTVGGAGDASTAAATGSPRKAWTPSAEQEHNLQLLELVVKLREAMLGIPGLLVSEGEVSA---RGSAGGA-----------------------CRDQVAEAVKALDETASDVILEPYLSRVARSLEEKIAKMHRENFGSGAADATSALDGDG--------DHG-SGSLFLLELQRALAALQADHFGRIAALRAPCAQASLRSLA---ARLLRSYVTHCALLRPLSEVGKARVAQDMATLEIALSPIARVSELSGVYQESKAFRTLLFVD 2982
D +LL+++ PL + F+ R+ R++ P++ MFPQ + A+ P + D+ + R+I +EL P+LL G + KAV L C+ V+ MH + A T +P TP+ Q HN+ L+ ++ L +A+ + + + S G AG A CR+ +A+ AL L YL +A LE AKMH E+FG + + + GDG HG SGS F+ E A A + +H R+ P A+ + + LA RL+ ++ H +LLRPL+E GK R+A DMA LE+ L + + L VY+E +AFR ++F++
Sbjct: 468 DCRQLLDSMTPLYEAFIDRAYRRMSNPIQLMFPQSSNFHASPPGRSDMQTLARTIFSEL--------------------------------------EQAGQDPVLLDGALHQVRKAVNLFCSNVKRIMHQGKAAAVT------------------------------TPSLGRTPA--QAHNVGLMNVLSLLNDAVEEVGNRVEAAAATSIGTHTGKAGSATALPTGVVTPKEAKALCAKELTPCREMIADLEYAL--------LGYYLQALATLLEGIFAKMHGESFGDQTSASAVSASGDGPRSGSFRSSHGTSGSKFMQEFSNAFAVILEEHLRRL-----PIAEFATKCLADFVERLISVFIRHASLLRPLTESGKLRLANDMAQLELRLEHVLPLRNLGTVYEELRAFRHMIFLE 805
BLAST of mRNA_H-elongata_contig10389.328.1 vs. uniprot
Match: G4Z3A8_PHYSP (Conserved oligomeric Golgi complex subunit 5 n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z3A8_PHYSP) HSP 1 Score: 103 bits (256), Expect = 1.210e-18 Identity = 113/448 (25.22%), Postives = 182/448 (40.62%), Query Frame = 1
Query: 1765 LRRRTLRV--DRVGATEGNKGIECSGVGGVDGARLLEALGPLRDLFLARSLVRLTTPVEQMFPQFDGYMAAVPSKHDLASFVRSIHNELALSVPVGSAAGGRQTADGSAVSDAEPGGGGGNVGGGVEADLSLAPLLLRGVV----KAVKLLCTKVEA-MHSAEKTAFTFGGVSGGSGVGADEGTVGGAGDASTAAATGSPRKAWTPSAEQEHNLQLLELVVKLREAMLGIPGLLVSE--GEVSARGSAGGACRDQVAEAVKALDET----------ASDVILEP-------YLSRVARSLEEKIAKMHRENFGSGAADATSALDGDGDHG----------SGSLFLLELQRALAALQADHFGRIAALRAPCAQASLRSLAA---RLLRSYVTHCALLRPLSEVGKARVAQDMATLEIALSPIARVSELSGVYQESKAFRTLLFVDDED 2991
+R + RV + AT+ + + V D +LL+++ PL D F+ R+ R++ P++ MFPQ + A+ P + D+ + R+I +EL P+LL G + KAV L CT V+ MH + A T P TP+ Q HN+ L+ ++ L +A+ + + + G + SA + D + V L E ++I E YL +A LE AKMH E+FG + A A G SGS ++ E A A + +H R+ P A + + LA RL+ ++ H +L+RPL+E GK R+A DMA LE+ L I + + Y+E +AFR ++F+D+ +
Sbjct: 387 MREQATRVLNELYAATKQSAELVPIAVSAADRTQLLDSMAPLYDAFIDRAYRRMSNPIQLMFPQSSNFHASPPGRSDMQTLSRTIFSEL--------------------------------------EQAGQDPVLLDGALQQVRKAVNLFCTNVKRIMHQGKAAAATL------------------------------PSFGRTPA--QAHNVGLMNVLSMLNDALEEVGNRIETSATGNQTGAASAVSSATDSITNGVVTLKEAKMLCSRNLAPCREMITELEYALLGFYLQALAVLLEGIFAKMHDESFGDQSGVARVANSGGAPRSTGGLRSSQGTSGSKYMQEFSNAFAVVLEEHLRRL-----PIASFATKCLAEFVERLISVFIRHASLVRPLTENGKLRLANDMAQLELRLENIVPLRNVGAPYEELRAFRHMIFLDNSE 759
BLAST of mRNA_H-elongata_contig10389.328.1 vs. uniprot
Match: A0A5D6XQT0_9STRA (Conserved oligomeric Golgi complex subunit 5 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQT0_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.220e-17 Identity = 102/393 (25.95%), Postives = 162/393 (41.22%), Query Frame = 1
Query: 1858 RLLEALGPLRDLFLARSLVRLTTPVEQMFPQFDGYMAAVPSKHDLASFVRSIHNELALSVPVGSAAGGRQTADGSAVSDAEPGGGGGNVGGGVEADLSLAPLLLRGVV----KAVKLLCTKVEAMHSAEKTAFTFGGVSGGSGVGADEGTVGGAGDASTAAATGSPRKAWTPSAEQEHNLQLLELVVKLREAMLGIPGLLVS-----EGEVSARGSAGGACRDQVA---EAVKALDETASDVILEPYLSRVARSLEEKIAKMHRENFG------SGAADATSALDGDGDHGSGSLFLLELQRALAALQADHFGRIAALRAPCAQASLRSLAARLLRSYVTHCALLRPLSEVGKARVAQDMATLEIALSPIARVSELSGVYQESKAFRTLLFVD 2982
+LL+A+ PL D F R+ RL P++ MFPQ + + P + D+ + R++ +E+ P+LL G + +AV L C V+ + + K AA + +P TP+ Q HN+ LL ++ +L EA+ + + S E + +A C ++ E ++ L+ T IL YL + LE AKMH E+F + + AT+A G GS ++ E A + +H R+ R A + ARL+ ++ H ALLRPL E GK R+A DMA LE+ L + + L Y E +AFR ++F+D
Sbjct: 1424 QLLDAMAPLFDAFTDRTYRRLANPIQLMFPQSASFHTSPPGRSDMQTLARTVFSEV--------------------------------------DQAGQDPVLLAGALQQIRRAVTLFCANVKRITNTGK-----------------------------AATSTTPTLGRTPA--QAHNVSLLNVLHQLDEALSDVAARVASAAGAAESDAAALQVLQALCAQELQPCRELIQGLEYT----ILGTYLQGLCAILESIFAKMHDESFADLPPVSASSTGATAAATGASAKSGGSRYMAEFNGAFHVVLDEHIRRLPNARF--AGRCVSDFVARLISVFLRHAALLRPLEESGKLRLANDMAQLELRLEQLLPLKALGAPYDELRAFRHMVFLD 1741 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10389.328.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10389.328.1 >prot_H-elongata_contig10389.328.1 ID=prot_H-elongata_contig10389.328.1|Name=mRNA_H-elongata_contig10389.328.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1005bp MSNASEILGRIEDDPVFRGFLEAGFDPAAFASKIVKADVGKAVAAATVAPback to top mRNA from alignment at H-elongata_contig10389:947..8275+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10389.328.1 ID=mRNA_H-elongata_contig10389.328.1|Name=mRNA_H-elongata_contig10389.328.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7329bp|location=Sequence derived from alignment at H-elongata_contig10389:947..8275+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10389:947..8275+ >mRNA_H-elongata_contig10389.328.1 ID=mRNA_H-elongata_contig10389.328.1|Name=mRNA_H-elongata_contig10389.328.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=6030bp|location=Sequence derived from alignment at H-elongata_contig10389:947..8275+ (Himanthalia elongata Himel1 dioecious)back to top |