mRNA_H-elongata_contig10383.324.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-elongata_contig10383.324.1 vs. uniprot
Match: A0A6H5JSL7_9PHAE (N-acetyltransferase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSL7_9PHAE) HSP 1 Score: 279 bits (713), Expect = 4.350e-83 Identity = 152/252 (60.32%), Postives = 173/252 (68.65%), Query Frame = 1 Query: 532 VSREVEIAGERMLLKVANLDDYVAIADVRFDVFSPVHDSLKHRFRERSCMLMRERRHWGAFCLVAALKAEAGSADI-----------------SGNECDGDREGKMEDGEGVDGVSSGNHVLGTLECSTHEFNGTPLEVDTEGIPDRITRLYLTEVAVRSDCRRLGVGRQLMGAVDDVAKELETSEVFLHVNEVNTAALGLYAACGYEDAPDNAQNRAFTNRLGLAAGFLGQRHRLMHKTFPMEGRSSGEVG 1236
VSRE + G+ M+L+VA LDDY AIADVRFDVFSPVH +LKHRFRERSC+LMRERR GAFCLVAAL A + G E D VS G HVLGTLECS HEF+GTPL V+ E +I RLYLTEVAVRSDCRR+GVGR L+ VDDVA+ L+TSEVFLHVNE+N AAL LYA CGYE+AP+ A NRAFTN LGL+ GF+GQRH L+HKTFP S G+ G
Sbjct: 183 VSREAALNGQEMVLRVAKLDDYFAIADVRFDVFSPVHSTLKHRFRERSCLLMRERRRKGAFCLVAALDGPARAXXXXXXXXXXXXXXXXXXEGGGVELGADPTASAAASALETAVSDG-HVLGTLECSRHEFDGTPLAVEVEEQGAKIARLYLTEVAVRSDCRRMGVGRVLLELVDDVARALKTSEVFLHVNEINQAALRLYARCGYEEAPNGASNRAFTNSLGLSGGFIGQRHLLLHKTFPDADGSDGDRG 433
BLAST of mRNA_H-elongata_contig10383.324.1 vs. uniprot
Match: A0A1Z5J8X3_FISSO (N-acetyltransferase domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8X3_FISSO) HSP 1 Score: 108 bits (269), Expect = 5.930e-21 Identity = 83/242 (34.30%), Postives = 114/242 (47.11%), Query Frame = 1 Query: 487 ENANQGATISQRIESVSREVEIAGERMLLKVANLDDYVAIADVRFDVFSPVHDSLKHRFRERSCMLMRERRHWGAFCLVAALKAEAGSADISGNECDGDREGKMEDGEGVDGVSSGNHVLGTLECSTHEFNGTPLEVDTEGIPDRITRLYLTEVAVRSDCRRLGVGRQLMGAVDDVAKELETSEVFLHVNEVNTAALGLYAACGYE--DAPDNAQNRAFTNRLGLAAGFL-GQRHRLMHKTF 1203
EN +GAT + V+ +L+++AN D IA +R VFS + +F ERSC + RR GA CL+AA + + + VLG+ ECS HEF GT L + + + LY+TEVAV D R G+GR+LM AVD AK ++LHV+ N AAL LYA GYE + +++ FT L L G G+ H LM+K
Sbjct: 303 ENDRRGATFDRPGAIVAHPTP--NSNLLVRIANPSDDFQIAALRLSVFSDFTPEQQGKFCERSCQAISSRRLRGACCLIAAHENDTET------------------------------VLGSAECSYHEFFGTRLGQRRQ----QFSILYVTEVAVDMDARGQGIGRKLMDAVDVYAKSRNIETIYLHVDVENNAALSLYAKSGYERVNGEEDSMYLEFTTSLHLHPGATKGRDHYLMYKNL 508
BLAST of mRNA_H-elongata_contig10383.324.1 vs. uniprot
Match: A0A7S0C2W4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C2W4_9STRA) HSP 1 Score: 105 bits (261), Expect = 6.850e-21 Identity = 77/217 (35.48%), Postives = 106/217 (48.85%), Query Frame = 1 Query: 559 ERMLLKVANLDDYVAIADVRFDVFSPVHDSLKHRFRERSCMLMRERRHWGAFCLVAALKAEAGSADISGNECDGDREGKMEDGEGVDGVSSGNHVLGTLECSTHEFNGTPLEVDTEGIPDRITRLYLTEVAVRSDCRRLGVGRQLMGAVDDVAKELETSEVFLHVNEVNTAALGLYAACGYEDA-PDNAQNRAFTNRLGLAAGFL-GQRHRLMHKTF 1203
+ + ++VA D + IA +R +FS ++ F RSC ++ RR+ GA C+VA + A +DIS DR + ++GT ECS HEF GT L + D I LY+TEVAV RR G+G +LM A D+ AK ++LHV+ N A LY GYE D+ + FT L L G G+ H LMHK
Sbjct: 127 DNITVRVAKPVDDLCIASLRLSLFSDFSAHMRQAFCSRSCHVLDSRRNQGAACVVATIPIRA--SDIS------DRT---------------DIIVGTAECSIHEFYGTSL--GESRLQDSI--LYITEVAVSPTIRRQGIGSKLMKAFDEFAKARGVETIYLHVDVANEKAYSLYEKAGYEKVVSDDFFYKEFTKSLNLHDGATKGRNHYLMHKNM 316
BLAST of mRNA_H-elongata_contig10383.324.1 vs. uniprot
Match: A0A6U0XL64_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0XL64_9STRA) HSP 1 Score: 104 bits (259), Expect = 8.120e-21 Identity = 76/210 (36.19%), Postives = 102/210 (48.57%), Query Frame = 1 Query: 574 KVANLDDYVAIADVRFDVFSPVHDS-LKHRFRERSCMLMRERRHWGAFCLVAALKAEAGSADISGNECDGDREGKMEDGEGVDGVSSGNHVLGTLECSTHEFNGTPLEVDTEGIPDRITRLYLTEVAVRSDCRRLGVGRQLMGAVDDVAKELETSEVFLHVNEVNTAALGLYAACGYEDAPDNAQNRAFTNRLGLAAG-FLGQRHRLMHK 1197
+VA + ++ +AD+R VF+P D ++ + R R+ M ERR GA CLVA + E V ++GTLECSTHEF+ PL T RLY+TEVAV RR GV R L+ VDD A+E ++LHV+ N ALGLY G+ + + + F LGL +G F RH LM K
Sbjct: 99 EVAGVVEFAEVADLRLSVFTPYPDGPIRQKLRVRAREKMIERRVKGATCLVARPTRSSXXXXXXXXXXXXXXXXXXXXXEEEAPVPP---IIGTLECSTHEFDLAPLSGTTR-------RLYVTEVAVADGYRRRGVARALLRGVDDWAREQGAEAIYLHVDVENDGALGLYHRAGFVELDETVETYNFAAALGLHSGSFSKTRHVLMCK 298
BLAST of mRNA_H-elongata_contig10383.324.1 vs. uniprot
Match: A0A7S2UTX6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UTX6_9STRA) HSP 1 Score: 106 bits (265), Expect = 3.640e-20 Identity = 80/241 (33.20%), Postives = 117/241 (48.55%), Query Frame = 1 Query: 502 GATISQRIESVSREVEIAGERMLLKVANLDDYVAIADVRFDVFSPVHDSLKHRFRERSCMLMRERRHWGAFCLVAALKAEAGSADISGNECDGDREGKMEDGEGVDGVSSGNH-------VLGTLECSTHEFNGTPLEVDTEGIPDRITRLYLTEVAVRSDCRRLGVGRQLMGAVDDVAKELETSEVFLHVNEVNTAALGLYAACGYEDAP-DNAQNRAFTNRLGLAAGFL-GQRHRLMHK 1197
G T+ S S G+ + ++VA D IA++R VFS ++ +F +RSC + +RR GA C+VA+L IS EDG + N ++GT+ECS HEF GT L +P+RI +Y+TEVAV RR GVG +L+ + ++A + ++LHV+ N AA+ LY GY N+ FT L L G G++H L+HK
Sbjct: 468 GTTLIHPSPSSSASSNENGDALSVRVATAQDDYTIANLRLSVFSDFSPEVRKQFCQRSCEALAQRRLRGATCIVASLPKSMRGEIISRYV--------YEDGNPSFSYTPPNSDLENEEWIMGTVECSVHEFAGTML--GRSRLPERI--MYITEVAVSPRARRFGVGTRLLQGIHELAALRQVETLYLHVDVTNRAAIRLYEKAGYTRIKRGNSLYEEFTISLNLHDGATKGRKHYLLHK 696
BLAST of mRNA_H-elongata_contig10383.324.1 vs. uniprot
Match: A0A1Z5KAD1_FISSO (N-acetyltransferase domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KAD1_FISSO) HSP 1 Score: 102 bits (253), Expect = 5.620e-19 Identity = 75/216 (34.72%), Postives = 104/216 (48.15%), Query Frame = 1 Query: 565 MLLKVANLDDYVAIADVRFDVFSPVHDSLKHRFRERSCMLMRERRHWGAFCLVAALKAEAGSADISGNECDGDREGKMEDGEGVDGVSSGNHVLGTLECSTHEFNGTPLEVDTEGIPDRITRLYLTEVAVRSDCRRLGVGRQLMGAVDDVAKELETSEVFLHVNEVNTAALGLYAACGYE--DAPDNAQNRAFTNRLGLAAGFL-GQRHRLMHKTF 1203
+L+++A D IA +R VFS + +F ERSC + RR GA CL+AA + + + VLG+ ECS HEF GT L + + + LY+TEVAV D R G+G++LM AVD AK ++LHV+ N AAL LYA GYE + +++ FT L L G G+ H LM+K
Sbjct: 323 LLVRIATPTDDFQIAALRLSVFSDFTAEQQGKFCERSCQAISSRRLRGARCLIAAHQNDTET------------------------------VLGSAECSYHEFFGTRLGQRRQ----QFSILYVTEVAVDIDARGQGIGKKLMDAVDIYAKSRNIETIYLHVDVENKAALSLYAKSGYERVNGEEDSMYLEFTTSLHLHPGATKGRDHYLMYKNL 504
BLAST of mRNA_H-elongata_contig10383.324.1 vs. uniprot
Match: A0A7S4V447_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V447_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 9.260e-13 Identity = 54/131 (41.22%), Postives = 72/131 (54.96%), Query Frame = 1 Query: 841 VLGTLECSTHEFNGTPLEVDTEGIPDRITR-LYLTEVAVRSDCRRLGVGRQLMGAVDDVAKELETSEVFLHVNEVNTAALGLYAACGYE--DAPDNAQN------RAFTNRLGLAAGFL-GQRHRLMHKTF 1203
+LG+LECS+HEF T L G I++ LYLTEVAV + RR G G L+ VD +A + ++LHV+ N AAL LY GY+ D NA N FT +L L G++ G+ H LM K +
Sbjct: 97 ILGSLECSSHEFVNTEL-----GRKRPISKVLYLTEVAVSPEARRCGAGTLLLQGVDKLAATRKIESIYLHVDVTNQAALDLYQKSGYQLLDRRPNAYNVDAYMYEEFTYKLNLHDGYIKGRCHYLMVKHY 222
BLAST of mRNA_H-elongata_contig10383.324.1 vs. uniprot
Match: A0A7S1VYH4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VYH4_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 6.910e-12 Identity = 54/131 (41.22%), Postives = 72/131 (54.96%), Query Frame = 1 Query: 841 VLGTLECSTHEFNGTPLEVDTEGIPDRITR-LYLTEVAVRSDCRRLGVGRQLMGAVDDVAKELETSEVFLHVNEVNTAALGLYAACGYE--DAPDNAQN------RAFTNRLGLAAGFL-GQRHRLMHKTF 1203
+LG+LECS+HEF T L G I++ LYLTEVAV + RR G G L+ VD +A + ++LHV+ N AAL LY GY+ D NA N FT +L L G++ G+ H LM K +
Sbjct: 448 ILGSLECSSHEFVNTEL-----GRKRPISKVLYLTEVAVSPEARRCGAGTLLLQGVDKLAATRKIESIYLHVDVTNQAALDLYQKSGYQLLDRRPNAYNVDAYMYEEFTYKLNLHDGYIKGRCHYLMVKHY 573
BLAST of mRNA_H-elongata_contig10383.324.1 vs. uniprot
Match: A0A8J7DQI4_9CYAN (GNAT family N-acetyltransferase n=1 Tax=Romeria aff. gracilis LEGE 07310 TaxID=915328 RepID=A0A8J7DQI4_9CYAN) HSP 1 Score: 59.7 bits (143), Expect = 2.550e-6 Identity = 29/59 (49.15%), Postives = 38/59 (64.41%), Query Frame = 1 Query: 928 RLYLTEVAVRSDCRRLGVGRQLMGAVDDVAKELETSEVFLHVNEVNTAALGLYAACGYE 1104
RLYL+ +AVR DCRR GV +QL+ + +A E E++LHV E N AA LY GY+
Sbjct: 135 RLYLSNLAVRPDCRRTGVAQQLLATCEQIATEWGCYELYLHVMENNEAAQSLYRKNGYQ 193
BLAST of mRNA_H-elongata_contig10383.324.1 vs. uniprot
Match: UPI0019FC7A15 (N-acetyltransferase n=1 Tax=Synechococcales cyanobacterium C42_A2020_086 TaxID=2774344 RepID=UPI0019FC7A15) HSP 1 Score: 59.3 bits (142), Expect = 4.010e-6 Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = 1 Query: 838 HVLGTLECSTHEFNGTPLEVDTEGIPDRITRLYLTEVAVRSDCRRLGVGRQLMGAVDDVAKELETSEVFLHVNEVNTAALGLYAACGYE 1104
H+LGT+E S L+ P LY++ +AVR++ RR GVGRQL+ A + +A + S + LHV E N AA LYAA GY+
Sbjct: 123 HLLGTVELS--------LKTPPFCSPRSHGYLYISNLAVRAEYRRQGVGRQLLQACERIAADWGFSNLSLHVLENNEAARRLYAAMGYQ 203 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10383.324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10383.324.1 >prot_H-elongata_contig10383.324.1 ID=prot_H-elongata_contig10383.324.1|Name=mRNA_H-elongata_contig10383.324.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=395bp MSLSVRASVTIFAGALSALYSCSLVMPLQIPRGSESNRFDSVSWIVPVRLback to top mRNA from alignment at H-elongata_contig10383:3926..7720- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10383.324.1 ID=mRNA_H-elongata_contig10383.324.1|Name=mRNA_H-elongata_contig10383.324.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3795bp|location=Sequence derived from alignment at H-elongata_contig10383:3926..7720- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10383:3926..7720- >mRNA_H-elongata_contig10383.324.1 ID=mRNA_H-elongata_contig10383.324.1|Name=mRNA_H-elongata_contig10383.324.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2370bp|location=Sequence derived from alignment at H-elongata_contig10383:3926..7720- (Himanthalia elongata Himel1 dioecious)back to top |