mRNA_H-elongata_contig103232.269.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig103232.269.1 vs. uniprot
Match: D7FMA5_ECTSI (Kinesin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA5_ECTSI) HSP 1 Score: 273 bits (698), Expect = 5.230e-82 Identity = 151/174 (86.78%), Postives = 157/174 (90.23%), Query Frame = 1 Query: 10 QLGAEGRTVSSTQMNMDSSRSHLLCSIVVSSTNCRTGSSLRGKLTLVDLAGSERVGKSGATGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHTLTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKTITNSVSASGGAAAAA-QVQALRRELEKMKGEGG 528 QLGAEGRTVSSTQMN DSSRSHLLCSIVV+STN RTGSSLRGKLTLVDLAGSERVGKSGA+GDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNH LTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCK++TNS QVQALRREL+K+KG G Sbjct: 1077 QLGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKSVTNSTGPGXXXXXXXXQVQALRRELQKLKGGDG 1250
BLAST of mRNA_H-elongata_contig103232.269.1 vs. uniprot
Match: A0A835Z134_9STRA (Kinesin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z134_9STRA) HSP 1 Score: 244 bits (624), Expect = 3.540e-77 Identity = 133/167 (79.64%), Postives = 149/167 (89.22%), Query Frame = 1 Query: 16 GAEGRTVSSTQMNMDSSRSHLLCSIVVSSTNCRTGSSLRGKLTLVDLAGSERVGKSGATGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHTLTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKTITNSVSASGGAAAAAQVQALRRELEKMK 516 GA+ R VSSTQMN DSSRSHL+CS+V+SSTN RTGS +RGKLTLVDLAGSERVGKSGA G+QLKEAQSINKSLSALGDVI ALT+G HIPYRNH LTMMMSDSLGGN+KTLMFVCASPADYN SET+N+LQFAARCK +TNS S +GGAA Q+QAL+REL ++K Sbjct: 224 GADRRAVSSTQMNADSSRSHLICSMVISSTNTRTGSVVRGKLTLVDLAGSERVGKSGAAGEQLKEAQSINKSLSALGDVIAALTSGSAHIPYRNHPLTMMMSDSLGGNAKTLMFVCASPADYNTSETINSLQFAARCKDVTNS-SVAGGAA---QLQALQRELNRLK 386
BLAST of mRNA_H-elongata_contig103232.269.1 vs. uniprot
Match: A0A7S3HTV9_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTV9_9STRA) HSP 1 Score: 205 bits (521), Expect = 5.280e-62 Identity = 114/167 (68.26%), Postives = 134/167 (80.24%), Query Frame = 1 Query: 16 GAEGRTVSSTQMNMDSSRSHLLCSIVVSSTNCRTGSSLRGKLTLVDLAGSERVGKSGATGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHTLTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKTITNSVSASGGAAAAAQVQALRRELEKMK 516 G+ RT +STQMN +SSRSHL+CS+VV TN R+G GKLTLVDLAGSERV KSGA G+ LKEAQSINKSLSALGDVI ALTT +H+PYRNH LTM+MSDS+GGN+KTLMFV SPADYN E+ ++L FA RCK ITN+V+A G AA QV AL++EL K+K Sbjct: 199 GSARRTTASTQMNAESSRSHLICSLVVKLTNKRSGKESIGKLTLVDLAGSERVDKSGAAGEVLKEAQSINKSLSALGDVISALTTNQQHVPYRNHPLTMLMSDSIGGNAKTLMFVNTSPADYNTPESNSSLAFANRCKDITNAVAAGPGVQAA-QVSALKKELAKLK 364
BLAST of mRNA_H-elongata_contig103232.269.1 vs. uniprot
Match: A0A7S2B390_9STRA (Kinesin-like protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B390_9STRA) HSP 1 Score: 209 bits (532), Expect = 1.080e-61 Identity = 112/169 (66.27%), Postives = 138/169 (81.66%), Query Frame = 1 Query: 10 QLGAEGRTVSSTQMNMDSSRSHLLCSIVVSSTNCRTGSSLRGKLTLVDLAGSERVGKSGATGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHTLTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKTITNSVSASGGAAAAAQVQALRRELEKMK 516 + G R+ ST+MN +SSRSHL+ S V+ STN R+G GKLTLVDLAGSERV KSGA G +LKEAQSINKSLSA+GDV+GALT+G KHIPYRNHTLT +MSDS+GG++KT+M VC SPADYNA E++NAL FA RCK + N ++A+ AAAAAQVQ+LR+EL ++K Sbjct: 386 EAGVRNRSTQSTKMNAESSRSHLVMSFVIRSTNRRSGVVTSGKLTLVDLAGSERVDKSGAEGQRLKEAQSINKSLSAIGDVVGALTSGTKHIPYRNHTLTTLMSDSIGGSAKTVMMVCCSPADYNAVESVNALSFAVRCKNVKN-MTAANPAAAAAQVQSLRQELARLK 553
BLAST of mRNA_H-elongata_contig103232.269.1 vs. uniprot
Match: A0A7S2K2T0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K2T0_9STRA) HSP 1 Score: 213 bits (542), Expect = 1.050e-60 Identity = 121/168 (72.02%), Postives = 140/168 (83.33%), Query Frame = 1 Query: 16 GAEGRTVSSTQMNMDSSRSHLLCSIVVSSTNCRTGSSLRGKLTLVDLAGSERVGKSGATGDQLKEAQSINKSLSALGDVIGALTTGV-KHIPYRNHTLTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKTITNSVSASGGAAAAAQVQALRRELEKMK 516 G+ RT SST+MN DSSRSHL+ SIV S N RTG ++GKLTLVDLAGSERVGKSGATG+QLKEAQSINKSLSALGDVI ALT+G KH+PYRN+ LTM+MSDS+GGN+KTLMFVC+SPADYN SET N+L FA RCK + N+V +S G AA +V+ALR EL KMK Sbjct: 1165 GSLSRTTSSTKMNADSSRSHLITSIVTSVINKRTGRIVQGKLTLVDLAGSERVGKSGATGNQLKEAQSINKSLSALGDVICALTSGKNKHVPYRNNPLTMLMSDSIGGNAKTLMFVCSSPADYNRSETTNSLDFAKRCKDVRNNVESSHGNAA--KVKALRAELAKMK 1330
BLAST of mRNA_H-elongata_contig103232.269.1 vs. uniprot
Match: B8CD61_THAPS (Kinesin motor protein-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CD61_THAPS) HSP 1 Score: 199 bits (507), Expect = 4.490e-60 Identity = 105/146 (71.92%), Postives = 122/146 (83.56%), Query Frame = 1 Query: 16 GAEGRTVSSTQMNMDSSRSHLLCSIVVSSTNCRTGSSLRGKLTLVDLAGSERVGKSGATGDQLKEAQSINKSLSALGDVIGALTTGVK-HIPYRNHTLTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKTITNSVS 450 GA+GR SST+MN DSSRSH++ ++V+S N RTG + GKLTL DLAGSERV KSGA G QLKEAQSINKSLSALGDVIGALT+G + HIPYRNH LTM+MSDS+GGN+KTLMFVC SPADYN ET N+L FA RC+ +TN+VS Sbjct: 217 GAKGRASSSTKMNADSSRSHMIATVVLSLRNRRTGKVIHGKLTLTDLAGSERVAKSGAAGHQLKEAQSINKSLSALGDVIGALTSGGRQHIPYRNHPLTMLMSDSIGGNAKTLMFVCCSPADYNRKETANSLDFAKRCRNVTNNVS 362
BLAST of mRNA_H-elongata_contig103232.269.1 vs. uniprot
Match: A0A812VNR0_SYMMI (Kinesin-like protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VNR0_SYMMI) HSP 1 Score: 203 bits (516), Expect = 9.740e-60 Identity = 110/169 (65.09%), Postives = 136/169 (80.47%), Query Frame = 1 Query: 10 QLGAEGRTVSSTQMNMDSSRSHLLCSIVVSSTNCRTGSSLRGKLTLVDLAGSERVGKSGATGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHTLTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKTITNSVSASGGAAAAAQVQALRRELEKMK 516 ++GA RT +STQMN +SSRSHL+CS+V++ TN RTG++ GKLT+VDLAGSERV KSGA G+ LKEAQSINKSLSALGDVI +LT+ H+PYRNH LTM+MSDS+GGN+KTLMFV SPADYN E+ ++L FA RCK +TNS SA A AQ+ AL++EL K+K Sbjct: 344 EIGANRRTTASTQMNAESSRSHLICSLVITLTNRRTGTTTTGKLTVVDLAGSERVDKSGAQGEMLKEAQSINKSLSALGDVIASLTSNSSHVPYRNHPLTMLMSDSIGGNAKTLMFVNCSPADYNVQESNSSLSFANRCKDVTNSGSAPP-AQQVAQLNALKKELAKLK 511
BLAST of mRNA_H-elongata_contig103232.269.1 vs. uniprot
Match: A0A7S2HG16_9STRA (Kinesin-like protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HG16_9STRA) HSP 1 Score: 196 bits (497), Expect = 2.060e-59 Identity = 109/172 (63.37%), Postives = 135/172 (78.49%), Query Frame = 1 Query: 16 GAEGRTVSSTQMNMDSSRSHLLCSIVVSSTNCRTGSSLRGKLTLVDLAGSERVGKSGATGDQLKEAQSINKSLSALGDVIGALTTGV-KHIPYRNHTLTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKTITNSVSASGGAAAAAQVQALRRELEKMKGEGG 528 G + R+ ST+MN SSRSHL+ S+V+ +TN R+G+ ++GKLTLVDLAGSERV KSGA G +LKEA SINKSLSA+GDV+GALT+G KHIPYRNHTLT +MSDSLGG +KT+M VC SPADYN +E++N+L FA+RCK + S G A A QVQ LR EL ++K EGG Sbjct: 103 GMQHRSTHSTKMNAVSSRSHLVMSMVIRTTNRRSGALVQGKLTLVDLAGSERVDKSGAEGQRLKEAASINKSLSAIGDVVGALTSGKGKHIPYRNHTLTTLMSDSLGGTAKTVMMVCCSPADYNVNESVNSLAFASRCKGVK---SVKGAAGAGQQVQMLRMELARLKKEGG 271
BLAST of mRNA_H-elongata_contig103232.269.1 vs. uniprot
Match: A0A7S3HTU3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTU3_9STRA) HSP 1 Score: 205 bits (521), Expect = 5.010e-58 Identity = 114/167 (68.26%), Postives = 134/167 (80.24%), Query Frame = 1 Query: 16 GAEGRTVSSTQMNMDSSRSHLLCSIVVSSTNCRTGSSLRGKLTLVDLAGSERVGKSGATGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHTLTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKTITNSVSASGGAAAAAQVQALRRELEKMK 516 G+ RT +STQMN +SSRSHL+CS+VV TN R+G GKLTLVDLAGSERV KSGA G+ LKEAQSINKSLSALGDVI ALTT +H+PYRNH LTM+MSDS+GGN+KTLMFV SPADYN E+ ++L FA RCK ITN+V+A G AA QV AL++EL K+K Sbjct: 852 GSARRTTASTQMNAESSRSHLICSLVVKLTNKRSGKESIGKLTLVDLAGSERVDKSGAAGEVLKEAQSINKSLSALGDVISALTTNQQHVPYRNHPLTMLMSDSIGGNAKTLMFVNTSPADYNTPESNSSLAFANRCKDITNAVAAGPGVQAA-QVSALKKELAKLK 1017
BLAST of mRNA_H-elongata_contig103232.269.1 vs. uniprot
Match: K0SZ09_THAOC (Kinesin motor domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SZ09_THAOC) HSP 1 Score: 201 bits (512), Expect = 1.120e-56 Identity = 112/179 (62.57%), Postives = 136/179 (75.98%), Query Frame = 1 Query: 16 GAEGRTVSSTQMNMDSSRSHLLCSIVVSSTNCRTGSSLRGKLTLVDLAGSERVGKSGATGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHTLTMMMSDSLGGNSKTLMFVCASPADYNASETLN-----------ALQFAARCKTITNSVSASGG-AAAAAQVQALRRELEKMK 516 G++GR SST+MN +SSRSHL+ +IV++ N RTG ++RGKLTLVDLAGSERV KSGATG QLKEAQSINKSLSALGDVIGALT+ HIPYRNH LTM+MSDS+GGNSKTL+ VC SPADYN E+ N +L FA RC+ +TN + G +++AQ+ ALR EL K+K Sbjct: 1046 GSKGRASSSTKMNAESSRSHLIVTIVITLQNKRTGKAIRGKLTLVDLAGSERVSKSGATGHQLKEAQSINKSLSALGDVIGALTSQKSHIPYRNHPLTMLMSDSIGGNSKTLLLVCCSPADYNRRESTNRCTIVLNHATLSLDFAKRCRNVTNKATKGGSNESSSAQIMALRAELSKLK 1224 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103232.269.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig103232.269.1 >prot_H-elongata_contig103232.269.1 ID=prot_H-elongata_contig103232.269.1|Name=mRNA_H-elongata_contig103232.269.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=178bp VLSQLGAEGRTVSSTQMNMDSSRSHLLCSIVVSSTNCRTGSSLRGKLTLVback to top mRNA from alignment at H-elongata_contig103232:1710..2243- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig103232.269.1 ID=mRNA_H-elongata_contig103232.269.1|Name=mRNA_H-elongata_contig103232.269.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=534bp|location=Sequence derived from alignment at H-elongata_contig103232:1710..2243- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig103232:1710..2243- >mRNA_H-elongata_contig103232.269.1 ID=mRNA_H-elongata_contig103232.269.1|Name=mRNA_H-elongata_contig103232.269.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1068bp|location=Sequence derived from alignment at H-elongata_contig103232:1710..2243- (Himanthalia elongata Himel1 dioecious)back to top |