mRNA_H-elongata_contig10322.268.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig10322.268.1 vs. uniprot
Match: D7G9J6_ECTSI (UBX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9J6_ECTSI) HSP 1 Score: 400 bits (1027), Expect = 8.860e-134 Identity = 221/303 (72.94%), Postives = 243/303 (80.20%), Query Frame = 1 Query: 457 VFVTESYREAVQEAARQHKFLLVYLHSPLHQDTPQFCRNTLCSAPMVDFMEHNVMVWGGSLVHGEAYAVGNALDACAFPYVALLLCNRNQVQVVERVEGAENTERLLDRLTAAMARFQEQLDRVYRQQREREDARRLREEQDHEYRRGLEEDRXXXXXXXXXXXXKXREVHDARERAEKAAALXXXXXXERVQRLEVMRRAVRGEPDAGGNTARIRLQLPNGSKACLSPLFVDRRFHQDGTVGEIRRFVTLYLEDKNIPIKNFSMSTNFPRRTYTQEN--DHVSVVEAGLHPTAMLFVHDLDA 1359 +F+ ESYREAVQEAARQHKFL+VYLHSPLHQDTP FCR+TLCS PMVDFMEHNV+VWGGSL+HGEAYAVGNALDACAFPYV LLLC +NQVQVVERVEGAENTE LLDRLT+AMARFQEQLDR++RQQRERE+ARRLREEQD++Y++GLE DR K R +AR AE XXXXXX R+ VR EP AGG T RIRLQLPNGSK VDRRF DGTVGEIR FVTL+LED +IPIKNFSMSTNFPRRTY+QE+ D +SV EAGLHPT MLFVHDLDA Sbjct: 1 MFLAESYREAVQEAARQHKFLMVYLHSPLHQDTPHFCRSTLCSEPMVDFMEHNVLVWGGSLMHGEAYAVGNALDACAFPYVGLLLCKQNQVQVVERVEGAENTEALLDRLTSAMARFQEQLDRIHRQQREREEARRLREEQDNDYKKGLEADRRRSEAQQEERRAKERAAEEARALAEXXXXXXXXXXXXXXXXXXXXRKRVRDEPPAGGKTTRIRLQLPNGSK-------VDRRFDADGTVGEIRGFVTLHLEDNDIPIKNFSMSTNFPRRTYSQEDGDDALSVEEAGLHPTGMLFVHDLDA 296
BLAST of mRNA_H-elongata_contig10322.268.1 vs. uniprot
Match: A0A6H5KFL2_9PHAE (UBX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFL2_9PHAE) HSP 1 Score: 298 bits (764), Expect = 3.350e-94 Identity = 182/298 (61.07%), Postives = 206/298 (69.13%), Query Frame = 1 Query: 592 MVDFMEHNVMVWGGSLVHGEAYAVGNALDACAFPYVALLLCNRNQVQVVERVEGAENTERLLDRLTAAMARFQEQLDRVYRQQREREDARRLREEQDHEYRRGLEEDRXXXXXXXXXXXXKXREVHDARERAEKAAA---------------------------------------LXXXXXXE-RVQRLEVMRRAVRGEPDAGGNTARIRLQLPNGSKACLSPLFVDRRFHQDGTVGEIRRFVTLYLEDKNIPIKNFSMSTNFPRRTYTQEN--DHVSVVEAGLHPTAMLFVHDLDA 1359 MVDFMEHNV+VWGGSL+HGEAYAVGNALDACAFPYV LLLC +NQVQVVERVEGAENTE LLDRLT+AMARFQEQLDR++RQQRERE+ARRLREEQD++Y++GLE DR XXXXX X AE+ AA L + R++RLE +R+ VR EP AGG T RIRLQLPNGSK ++ F DGTVGEIR FVTL+LED +IPIKNFSMSTNFPRRTY+QE+ D +SV EAGLHPT MLFVHDLDA Sbjct: 1 MVDFMEHNVLVWGGSLMHGEAYAVGNALDACAFPYVGLLLCKQNQVQVVERVEGAENTEALLDRLTSAMARFQEQLDRIHRQQREREEARRLREEQDNDYKKGLEADRRRSEAQQXXXXXXXXAXXXXXALAEEEAAKLAREEQIQPFVLHHPLLDRCYRLATPHLDVVVISFCLLLSSLVFVQLRIERLEDLRKRVRDEPPAGGKTTRIRLQLPNGSKVVSKD---EQEFDADGTVGEIRGFVTLHLEDNDIPIKNFSMSTNFPRRTYSQEDGDDALSVEEAGLHPTGMLFVHDLDA 295
BLAST of mRNA_H-elongata_contig10322.268.1 vs. uniprot
Match: A0A835ZEV9_9STRA (UBX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEV9_9STRA) HSP 1 Score: 228 bits (580), Expect = 1.830e-64 Identity = 169/438 (38.58%), Postives = 222/438 (50.68%), Query Frame = 1 Query: 277 PGIFSVIVGLPFRLLGKAISYALSPINYVLGVEDQPKDGGAAARRFVTQFEAEYGQ-------------------EQKPVFVTESYREAVQEAARQHK-------------------------------------------------------FLLVYLHSPLHQDTPQFCRNTLCSAPMVDFMEHNVMVWGGSLVHGEAYAVGNALDACAFPYVALLLCNRNQVQVVERVEGAENTERLLDRLTAAMARFQEQLDRVYRQQREREDARRLREEQDHEYRRGLEEDRXXXXXXXXXXXXKXREVHDARERAEKAAALXXXXXXERVQRLEVMRRAVRGEPDAGGNTARIRLQLPNGSKACLSPLFVDRRFHQDGTVGEIRRFVTLYLEDK--NIPIKNFSMSTNFPRRTYTQENDHVSVVEA-GLHPTAMLFVHDLDA 1359 PG S IVG P KA+S AL P++YVLG E+ PKDG AAARRF+ FEA+YG+ + P F +SYR+AV AA + K FLLVYLHSPLH+DTP FC+ TL S M +FM N + WGGS+ H +AY+V N L AC +P++ALLLC+ +QVQV+ER EG + E +L+R AAMARFQ+QLDR R Q XXXX XXXXXX R +A+ + E AAA R QRL +R + EP G R+R+QLPNG+K +DRRF +D + ++ F+ L+ + I FSM+TN+P+RTY +D + ++A GLHP A+L + DLDA Sbjct: 63 PGALSTIVGFPLWAAAKALSIALRPVSYVLGAEEAPKDGEAAARRFIAAFEAQYGRGGGXXXXXXXXXXXXXXXAARVPRFFPDSYRQAVAAAAVERKNAWRVLQSHRFPCRKQQSRSHASPGGALPSLSAAAIRSRRSAPLPLLPCVPSPPQFLLVYLHSPLHEDTPDFCK-TLTSETMAEFMAQNFLAWGGSVWHADAYSVSNQLGACTYPFMALLLCSPDQVQVMERFEGKLSCEAILERAGAAMARFQDQLDRARRAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDXXXXXXDAQRAEAEAQRQVELAAAQEADEADRRAQRLRELRDGIGQEPPPGPQATRLRMQLPNGTK-------LDRRFAKDAPLRAVQDFLELHFLEAPPGARIARFSMNTNYPKRTYAGADDLAASLDAAGLHPQALLLILDLDA 492
BLAST of mRNA_H-elongata_contig10322.268.1 vs. uniprot
Match: A0A024UP99_9STRA (UBX domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UP99_9STRA) HSP 1 Score: 173 bits (439), Expect = 2.650e-45 Identity = 119/312 (38.14%), Postives = 175/312 (56.09%), Query Frame = 1 Query: 433 EYGQEQKPVFVTESYREAVQEAARQHKFLLVYLHSPLHQDTPQFCRNTLCSAPMVDFM--EHNVMVWGGSLVHGEAYAVGNALDACAFPYVALLLCNRNQVQVVERVEGAENTERLLDRLTAAMARFQEQLDRVYRQQREREDARRLREEQDHEYRRGLEEDRXXXXXXXXXXXXKXREVHDARERAEKAAALXXXXXXERVQRLEVMR-RAVRGEPDAGGNTARIRLQLPNGSKACLSPLFVDRRFHQDGTVGEIRRFVTLYLEDKNIPIKNFSMSTNFPRRTYTQENDHVSVVEAGLHPTAMLFVHDLDA 1359 EYG + P FV S+R+ A KFLLVYLHS +HQDTP FC+N LC+ M F+ NV+ W GS++ E Y+V +L A +FP++ L+L + +V++V+G L+ RLTAA+ R Q+QL Q+ R +A+ LRE+QD EY++ LE DR + E + R XXXX ER +E+ R R G G +TA IRLQL NG+K ++R F T +R FV + ++ I I + ++TNFPR+++ ++ HV++ +AGL P A+L+V DLD+ Sbjct: 75 EYG-DHCPDFVQLSFRDTTNLAKADGKFLLVYLHSEVHQDTPSFCKNALCTDDMQAFVAGHDNVLFWAGSVLQPEGYSVSLSLGAASFPFLCLVLSTPRGINIVDKVQGNIPKTALVSRLTAAVQRNQQQLATARAQELFRTEAQLLREQQDLEYQQSLEADRRKAEEEALRKAKEEEEAREESLRLHXXXXXXXXXAAEREAAVELKRSRLTNGPATKGKDTAFIRLQLHNGTK-------LERLFWATDTFQTVRDFVDVAFFEREIAIVRYELATNFPRKSWDADHSHVTLQDAGLAPQALLYVQDLDS 378
BLAST of mRNA_H-elongata_contig10322.268.1 vs. uniprot
Match: A0A1V9Z2J2_9STRA (UBX domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z2J2_9STRA) HSP 1 Score: 172 bits (437), Expect = 6.930e-45 Identity = 133/361 (36.84%), Postives = 202/361 (55.96%), Query Frame = 1 Query: 307 PFRLLGKAISYALSPINYVLGVEDQPKDGGAAARRFVTQFEAEYGQEQKPVFVTESYREAVQEAARQHKFLLVYLHSPLHQDTPQFCRNTLCSAPMVDF-MEH-NVMVWGGSLVHGEAYAVGNALDACAFPYVALLLCNRNQVQVVERVEGAENTERLLDRLTAAMARFQEQLDRVYRQQREREDARRLREEQDHEYRRGLEEDRXXXXXXXXXXXXKXREVHDARERAEKAAALXXXXXXE-------RVQRLEVMRRAVRGEPDAGG-NTARIRLQLPNGSKACLSPLFVDRRFHQDGTVGEIRRFVTLYLEDKNIPIKNFSMSTNFPRRTYTQENDHVSVVEAGLHPTAMLFVHDLDA 1359 P + + S+ +P+ Y+ G P+ A +T+ EYG Q P F S+REA A KFLL YLHS +H+DTP FC+N LC+ M+ F +EH N+++W GS++ E Y+V L A +FP+V+LL+ + VVE+++G E+L RL A+ R Q L Q++ R +A+ LRE+QD EY+ LE DRXXXXXXXXXXXX X R E A + R Q ++ R A+ P A G +T +R QL NG++ ++R F+ + +R FV + L +K +PI N+ ++TN+PR+ + ++ ++++AGL P A+L+V DLD+ Sbjct: 42 PISVAAEMPSFWKAPLEYLFGSNPPPELLAATLHEDLTR---EYGA-QCPAFEHLSFREAANLAKTTGKFLLAYLHSEVHEDTPTFCKNALCTDEMLAFCLEHDNMVLWAGSVLQAEGYSVSLTLGAASFPFVSLLISTARGLNVVEKIQGHVTKEQLTARLANAILRNQHHLQASRAQEQFRTEAQILREQQDREYQESLEADRXXXXXXXXXXXXXXXXXXXXXARIEAALVAEEQLRAQKEAERQARAQTIQTKRDALANGPTARGKDTCLLRFQLHNGTR-------LERLFYASDSFQAVRNFVDVSLFEKEMPIVNYELATNYPRKVWGPDDVESTLLDAGLAPQALLYVQDLDS 391
BLAST of mRNA_H-elongata_contig10322.268.1 vs. uniprot
Match: A0A485KVI9_9STRA (Aste57867_11670 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVI9_9STRA) HSP 1 Score: 164 bits (416), Expect = 6.340e-42 Identity = 124/346 (35.84%), Postives = 196/346 (56.65%), Query Frame = 1 Query: 334 SYALSPINYVLGVEDQPKDGGAAARRFVTQFEAEYGQEQKPVFVTESYREAVQEAARQHKFLLVYLHSPLHQDTPQFCRNTLCSAPMVDF-MEH-NVMVWGGSLVHGEAYAVGNALDACAFPYVALLLCNRNQVQVVERVEGAENTERLLDRLTAAMARFQEQLDRVYRQQREREDARRLREEQDHEYRRGLEEDRXXXXXXXXXXXXKXREVHDARERAEKAAALXXXXXXERVQRLEVMRRAVRGEPDAGG-NTARIRLQLPNGSKACLSPLFVDRRFHQDGTVGEIRRFVTLYLEDKNIPIKNFSMSTNFPRRTYTQENDH-VSVVEAGLHPTAMLFVHDLDA 1359 S A S + ++LG E P + A + + EYG + P FV S+REA A + KFL++YLHS +HQDT FC+N+LC+ +V F + H N++ W GS++ E Y+V +L A +FP++++++ + ++E+V G ++L+ RL AA+AR Q+ L V Q++ R +A+ LRE+QD EY+ LE DR + E R ++ XXXXX + R+ + G P G +TA IR QL NG+K V+R F T IR FV + L D++IPI + ++TNFPR+++ ++D +++ AGL P ++L+V DLD+ Sbjct: 54 SSAASWLTWLLGGE--PATPESMAIDLHNRLKREYG-DLCPDFVHLSFREATTIAKNEGKFLVIYLHSEVHQDTHAFCKNSLCTDEVVAFTLAHDNILFWAGSVLQAEGYSVALSLGAASFPFLSMVISTPRGLNIIEKVHGNLPKDQLVARLGAAIARNQQHLVAVRAQEQFRTEAQVLREQQDLEYQESLEADRRKAEEEMLRQEREEAEARQLSMRLQEXXEAAXXXXXXXXXXVAAKRQRLDGGPTVKGKDTAFIRFQLHNGAK-------VERLFWAQDTFETIRAFVDVTLFDRDIPIVRYEVATNFPRKSWGPDDDQTITLHAAGLTPQSLLYVQDLDS 389
BLAST of mRNA_H-elongata_contig10322.268.1 vs. uniprot
Match: H3H037_PHYRM (UBX domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=H3H037_PHYRM) HSP 1 Score: 160 bits (404), Expect = 3.490e-40 Identity = 116/370 (31.35%), Postives = 186/370 (50.27%), Query Frame = 1 Query: 331 ISYALSPINYVLGVEDQPKDGGAAARRFVTQFEAEYGQEQKPVFVTESYREAVQEAARQHKFLLVYLHSPLHQDTPQFCRNTLCSAPMVDFMEHN--VMVWGGSLVHGEAYAVGNALDACAFPYVALLLCNRNQVQVVERVEGAENTERLLDRLTAAMARFQEQLDRVYRQQREREDARRLREEQDHEYRRGLEEDRXXXXXXXXXXXXKXREVHDARERAEKAAA----------------LXXXXXXERVQRLEVMRRAVR---------GEPDAGGNTARIRLQLPNGSKACLSPLFVDRRFHQDGTVGEIRRFVTLYLEDKNIPIKNFSMSTNFPRRTYTQENDHVSVVEAGLHPTAMLFVHDLDA 1359 + +SP+++VLG + +P+D AAAR F YG+ P F S+R+AV A KFLLV+LHS +H D FCR +C+ M ++ ++ ++ W G + H E + V +L FP++ALL C V VVE++ + ++++L AA+ R + L +++R +A+ LRE+QD EY+ L DR + +EV + ER E XXX E+ + E+ + R P A TA I+ L NG++ +D F+ T+ +R FV + D+ IPI+N+ ++TNFP++ Y E VS+ +AGL P A+++V DLD+ Sbjct: 44 VELLMSPLSFVLG-DGEPEDPQAAARNFTHSLRRRYGENATPRFEHTSFRDAVSTARTASKFLLVFLHSNIHDDADAFCRKAMCTDRMSAYLNNSDCIVSWAGCVQHAEGFGVSLSLGCATFPFLALLSCVSRGVNVVEKITANLPADEIIEKLNAAVDRNNQLLATARHIRQQRTEAQILREQQDQEYQESLAADRR-----------REQEVREQAEREEMERLRXXXXXXXXXXXXXXXXXXXIRQEQAFKAEIEVKRARIADGPKSRVPPPGADYKTAVIKFHLHNGTR-------LDHIFYAHDTLKTVRDFVDVEFFDREIPIRNYELATNFPKKVYGPELLDVSLTDAGLAPQALVYVQDLDS 394
BLAST of mRNA_H-elongata_contig10322.268.1 vs. uniprot
Match: A0A0N7L4T6_PLAHL (Predicted regulator of the ubiquitin pathway (Contains UAS and UBX domains) n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L4T6_PLAHL) HSP 1 Score: 157 bits (397), Expect = 2.660e-39 Identity = 119/352 (33.81%), Postives = 189/352 (53.69%), Query Frame = 1 Query: 331 ISYALSPINYVLGVEDQPKDGGAAARRFVTQFEAEYGQEQKPVFVTESYREAVQEAARQHKFLLVYLHSPLHQDTPQFCRNTLCSAPMVDFMEHN--VMVWGGSLVHGEAYAVGNALDACAFPYVALLLCNRNQVQVVERVEGAENTERLLDRLTAAMARFQEQLDRVYRQQREREDARRLREEQDHEYRRGLEEDRXXXXXXXXXXXXKXREVHDARERAEKAAALXXXXXXERVQRLEVMRRAVRG-------EPDAGGNTARIRLQLPNGSKACLSPLFVDRRFHQDGTVGEIRRFVTLYLEDKNIPIKNFSMSTNFPRRTYTQENDHVSVVEAGLHPTAMLFVHDLDA 1359 + +SP+++VLG + +P+D AAR F + YG+ P F S+R+AV A KFLLV+LHS +H D FCR ++C+ M ++ ++ ++ W G + H E + V +L FP++ALL C + VVE++ E ++ +L AA+ + L ++R + + LRE+QD EY+ LE DR XXXXXXXXXX X XXXXXX E R + P+A TA I+ L NG + ++ F+ T+G +R F+ + D++IPI+N+ ++TN+P++ Y E +V++ +AGL P A+++V DLD+ Sbjct: 40 VELLMSPLSFVLG-DGEPEDPQTAARNFAHSLQRRYGENVTPRFEHTSFRDAVSTARTASKFLLVFLHSNIHDDADAFCRKSICTERMSTYLNNSDCIVSWAGCVQHAEGFGVSLSLGCATFPFLALLSCLSRGIDVVEKITANVPAEEIIKKLDAAVDHNNQTLATARHIHQQRTETQILREQQDREYQEALEADRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKRARITDGPKTRTPSPNANYKTAVIKFHLHNGKR-------LEHIFYAHDTLGTVRDFIDVEFYDRDIPIRNYELATNYPKKVYGPELLNVTLADAGLAPQALVYVQDLDS 383
BLAST of mRNA_H-elongata_contig10322.268.1 vs. uniprot
Match: M4BCJ8_HYAAE (UBX domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BCJ8_HYAAE) HSP 1 Score: 156 bits (395), Expect = 6.030e-39 Identity = 118/359 (32.87%), Postives = 186/359 (51.81%), Query Frame = 1 Query: 331 ISYALSPINYVLGVEDQPKDGGAAARRFVTQFEAEYGQEQKPVFVTESYREAVQEAARQHKFLLVYLHSPLHQDTPQFCRNTLCSAPMVDFMEHN--VMVWGGSLVHGEAYAVGNALDACAFPYVALLLCNRNQVQVVERVEGAENTERLLDRLTAAMARFQEQLDRVYRQQREREDARRLREEQDHEYRRGLEEDRXXXXXXXXXXXXKXREVHDARERAEKAAALXXXXXXERVQRLEVMRRAVRGE--------------PDAGGNTARIRLQLPNGSKACLSPLFVDRRFHQDGTVGEIRRFVTLYLEDKNIPIKNFSMSTNFPRRTYTQENDHVSVVEAGLHPTAMLFVHDLDA 1359 + LSP+++VLG + +P+D AAR F + +G + P F S+R+AV A KFLLV+LHS +H D FCR +C+A M ++ ++ ++ W G + + E + V +L +FP+VALL C + VVE++ E L+++L AA+ R L +++R +A+ LRE+QD EY+ L DR XXXX X XXXXXX + + A+ + P AG TA I+ L NG++ ++ F+ T+ +R F+ + D+ IPI+N+ ++TNFP+R Y E V++ +AGL P A++FV DLD+ Sbjct: 41 VELLLSPLSFVLG-DGEPEDPQTAARNFTHRLRRRFGDDVTPGFEHTSFRDAVSTARTASKFLLVFLHSNIHDDAAVFCRQAMCTARMRTYLNNSDCIVAWAGCVQYAEGFGVSLSLGCASFPFVALLSCVSRGINVVEKITANLPAEALIEKLNAAVERNNRILTTARHIRQQRSEAQILREQQDVEYQESLAADRRREQEAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQEYKAAIEAKRAKIADGPKSRTPPPGAGYKTAVIKFHLHNGTR-------LEHIFYAHDTLKSVRDFIDVAFYDREIPIRNYELATNFPKRVYGSELLAVTLADAGLAPQALVFVQDLDS 391
BLAST of mRNA_H-elongata_contig10322.268.1 vs. uniprot
Match: A0A6G0X0Z8_9STRA (UBX domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0Z8_9STRA) HSP 1 Score: 156 bits (394), Expect = 7.330e-39 Identity = 117/348 (33.62%), Postives = 182/348 (52.30%), Query Frame = 1 Query: 376 DQPKDGGAAARRFVTQFEAEYGQEQKPVFVTESYREAVQEAARQHKFLLVYLHSPLHQDTPQFCRNTLCSAPMVDF-MEH-NVMVWGGSLVHGEAYAVGNALDACAFPYVALLLCNRNQVQVVERVEGAENTERLLDRLTAAMARFQEQLDRVYRQQREREDARRLREEQDHEYRRGLEEDRXXXXXXXXXXXXKXRE------------------VHDARERAEKAAALXXXXXXERVQRLEVMRRAVRGEPDAGGNTARIRLQLPNGSKACLSPLFVDRRFHQDGTVGEIRRFVTLYLEDKNIPIKNFSMSTNFPRRTYTQENDHVSVVEAGLHPTAMLFVHDLDA 1359 D+P A A + + EYG + P FV S+R+A A + KFL++YLHS +HQDTP FCR TLC+ F + H NV+ W GS++ E Y+V +L A +FP++AL++ + +VE+++G ++L+ +L +A+ R + L V Q++ R +++ LRE+QD EY LE DR + E + + E A KA XXX + QRLE G G +TA IR QL NG+K ++R F T +R F+ + ++ I I N+ ++TNFPR+ + + +S+ +AGL P A+L+V DLD+ Sbjct: 52 DEPDPPEAMASELHSNMKREYG-DICPDFVPLSFRDATTLAKNEGKFLVIYLHSEVHQDTPAFCRETLCTDEFHAFALSHDNVIFWAGSVLQPEGYSVSLSLGAASFPFLALVISTPRGLNIVEKIQGNVAKDQLVAQLNSALLRNEHHLVAVRAQEQFRTESQLLREQQDREYYESLEADRRKAEVEAARQEREEAEARXXXXXXXXXXXLLSLKLQEEAEAARKAXXXXXXAVTAKRQRLE------NGPKVKGRDTAFIRFQLHNGTK-------LERLFWAHDTFQTVRDFIDVEFFEREIAIINYELATNFPRKCWGPTDVAISLADAGLTPQALLYVQDLDS 385 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10322.268.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10322.268.1 >prot_H-elongata_contig10322.268.1 ID=prot_H-elongata_contig10322.268.1|Name=mRNA_H-elongata_contig10322.268.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=454bp MLEWYGWEVDRAVSAFMLGDITPPRSYLEGLANPSVRGGRGGGSAGSSPGback to top mRNA from alignment at H-elongata_contig10322:2777..8503- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10322.268.1 ID=mRNA_H-elongata_contig10322.268.1|Name=mRNA_H-elongata_contig10322.268.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5727bp|location=Sequence derived from alignment at H-elongata_contig10322:2777..8503- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10322:2777..8503- >mRNA_H-elongata_contig10322.268.1 ID=mRNA_H-elongata_contig10322.268.1|Name=mRNA_H-elongata_contig10322.268.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2724bp|location=Sequence derived from alignment at H-elongata_contig10322:2777..8503- (Himanthalia elongata Himel1 dioecious)back to top |