mRNA_H-elongata_contig10315.264.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig10315.264.1 vs. uniprot
Match: A0A6H5KFQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ3_9PHAE) HSP 1 Score: 552 bits (1423), Expect = 1.500e-183 Identity = 373/697 (53.52%), Postives = 419/697 (60.11%), Query Frame = 1 Query: 1 AQNFWTVPEVVSEIRDKKARHHLEILPFELKLREPSDEAMRFAAGFARQTGDLRSLSRVDLRVIALTYMLERQETGGSHLRTAPVPTGTRVNSKSTGVSATTLDPPREIPQPVDNPKHLDEE--------------AAGVDALPIKTSGEKPDVEETEATG--EINADVGVESLCQAMESAWTEEV-VADEGSSKQEASGRVAKQEENVMDALGGGGEYLDALGGVMAGTAAGKDVETRLTEGEDEEEEELDGGEVANGKHRAEGGREKRFEDDGGVEGVDNHXXXXXXXXXXXXDEWEPEGEGSVEEEASKTPPEAGAADEAVFVAGDFPVLGLGRGD---AAA---------SDLTTPLPTSAHSASPPAEEERSWSLLARSNPAPFKVPAKQDPTPLPAAAPVEQPVHTG---LGNFV---------------KGPPDGAKGAGTSRILSSAAAFGVSXXXXXXXXEDDEDGVGWVTPSNIKSHKAAGLGLNGPSQFQRKV----PVALASKCRAGCVTTDFAMQNVILQVGLPLLSLDGMAVRRVRQWILRCAACFKTCTEMGRLFCPVCGNASLDRVSCSVNAKTGATHVHLRKNRKVNLRGSKYSIPAPNPRKGRFEGDLLLREDQLLTGIWAQKAKRKEKDVSSMFGKDITGDVGLTVSRASDIMVGYGRKNPNAARGRERRGKKGIKNR 1938 A+NFWT+PEVV+EIRDKKAR HLE LPFELKLREPSDEAM+FAA FARQTGDLRSLSRVDL+VIAL YMLERQETG HLRTAP+ GT+VNS GVSA TL P + + D AA A K S +PD A G E A VESLC A++ AWT +V A +G G A+ XXXXXXXXXXXX E + E+A+ T A F A DFP LG G+ AAA S P T+A + + SWSL+ARSNPAPFKVPAK DP PLPAAA P+ T +G+F + PDGA GTSRI+S+AAAFG GWV PSNIKS KAAG+GLNGPSQ QRK +AS+CRAGCVTTDFAMQNVILQVGLPLLSLDGMAV RV+QWILRCAACFKTCTEMGRLFCPVCGNA+LDRVSCSVNA +GAT VHLRKN KVNLRGSK+SIPA NP KGRFEGDLLLREDQLL+GIWAQKA+RKEKDVSSMFG+DITG+VGLTVS+++DI+VGYGRKNPN+ARGRERRGKKG+K R Sbjct: 98 AENFWTIPEVVAEIRDKKARQHLESLPFELKLREPSDEAMKFAASFARQTGDLRSLSRVDLKVIALAYMLERQETGAVHLRTAPIRPGTKVNSNPKGVSAPTLAPANDATEETSAKVFADAALKDATTTTGDVNTAAAAATADSGKPSEREPDTPAATAIGRKEKEAAGEVESLCTAVKQAWTNDVGTAGDG------HGPAAENXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------XXXXXXXXXXXXXXXXXXXXXXAEKAKSEDAATTA-------SAPFSADDFPSLGGGKSGPVPAAAPXXXXXXTSSPFLPPAATAALATAHADAPTSSWSLMARSNPAPFKVPAKADPAPLPAAA--APPLATDNDPVGHFATSGAASPGAATAAADRPRPDGAT-PGTSRIMSTAAAFG-----------------GWVNPSNIKSQKAAGIGLNGPSQTQRKGIHKGRSKVASQCRAGCVTTDFAMQNVILQVGLPLLSLDGMAVHRVKQWILRCAACFKTCTEMGRLFCPVCGNATLDRVSCSVNANSGATRVHLRKNHKVNLRGSKFSIPAANPAKGRFEGDLLLREDQLLSGIWAQKARRKEKDVSSMFGEDITGNVGLTVSKSADIVVGYGRKNPNSARGRERRGKKGVKTR 714
BLAST of mRNA_H-elongata_contig10315.264.1 vs. uniprot
Match: D8LBA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBA5_ECTSI) HSP 1 Score: 525 bits (1352), Expect = 3.690e-175 Identity = 332/666 (49.85%), Postives = 371/666 (55.71%), Query Frame = 1 Query: 1 AQNFWTVPEVVSEIRDKKARHHLEILPFELKLREPSDEAMRFAAGFARQTGDLRSLSRVDLRVIALTYMLERQETGGSHLRTAPVPTGTRVNSKSTGVSATTLDPPREIPQPVDNPKHLDEEAAGVDALPIKTSGEKPDVEETEATGEINADVGVESLCQAMESAWTEEVVADEGSSKQEASGRVAKQEENVMDALGGGGEYLDALGGVMAGTAAGKDVETRLTEGEDEEEEELDGGEVANGKHRAEGGREKRFEDDGGVEGVDNHXXXXXXXXXXXXDEWEPEGEGSVEEEASKTPPEAGAADEAVFVAGDFPVLGLGRGDAAASDLTTPLPTSAHSASPPAEEERSWSLLARSNPAPFKVPAKQDPTPLPAAAPV------EQPVHTGLGNFVKGP----------PDGAKGAGTSRILSSAAAFGVSXXXXXXXXEDDEDGVGWVTPSNIKSHKAAGLGLNGPSQFQRKVP----VALASKCRAGCVTTDFAMQNVILQVGLPLLSLDGMAVRRVRQWILRCAACFKTCTEMGRLFCPVCGNASLDRVSCSVNAKTGATHVHLRKNRKVNLRGSKYSIPAPNPRKGRFEGDLLLREDQLLTGIWAQKAKRKEKDVSSMFGKDITGDVGLTVSRASDIMVGYGRKNPNAARGRERRGKKGIKNR 1938 A+NFWT+PEVV+EIRDKKAR HLE LPFELKLREPSDEAM+FAA FARQTGDLRSLSRVDL+VIAL YMLERQETG HLRTAP+ GT+VNS GVSA TL P + + EA+ ++ AD +++ AS T A SD PTS SWSL+ARSNPAPFKVPAK DP PLPAA + P + V P PDGAK GTSRI+S+AAAFGVS DD+DG GWV PSNIKS KAAG+GLNGPSQ QRK +AS+CRAGCVTTDFAMQNVILQVGLPLLSLDGMAV RV+QWILRCAACFKTCTEMGRLFCPVCGNA+LDRVSCSVNA +GAT VHLRKN KVNLRGSK+SIPA NP KGRFEGDLLLREDQLL+GIWAQKA+RKEKDVSSMFG+DITG+VGLTVS+++D++VGYGRKNPN+ARGRERRGKKG+K R Sbjct: 98 AENFWTIPEVVAEIRDKKARQHLESLPFELKLREPSDEAMKFAASFARQTGDLRSLSRVDLKVIALAYMLERQETGAGHLRTAPIRPGTKVNSNRKGVSAPTLAPANDATE--------------------------------EASAKVLADATLQT---------------------------------------------------------------------------------------------------------------------------------------ASTT-------------------XXXXXXXXAPSDA----PTS------------SWSLMARSNPAPFKVPAKADPAPLPAAXXXXXLDTDDDPAGHFTTSGVASPGAAAAADRPRPDGAK-PGTSRIMSTAAAFGVSGGGA-----DDDDGEGWVNPSNIKSQKAAGIGLNGPSQTQRKGSHKGRSTVASQCRAGCVTTDFAMQNVILQVGLPLLSLDGMAVHRVKQWILRCAACFKTCTEMGRLFCPVCGNATLDRVSCSVNANSGATRVHLRKNHKVNLRGSKFSIPAANPAKGRFEGDLLLREDQLLSGIWAQKARRKEKDVSSMFGEDITGNVGLTVSKSADLVVGYGRKNPNSARGRERRGKKGVKTR 555
BLAST of mRNA_H-elongata_contig10315.264.1 vs. uniprot
Match: A0A835YK00_9STRA (Putative RNA binding protein NOB1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK00_9STRA) HSP 1 Score: 315 bits (807), Expect = 4.860e-95 Identity = 240/658 (36.47%), Postives = 302/658 (45.90%), Query Frame = 1 Query: 1 AQNFWTVPEVVSEIRDKKARHHLEILPFELKLREPSDEAMRFAAGFARQTGDLRSLSRVDLRVIALTYMLERQETGGSHLRTAPVPTGTRVNSKSTGVSATTLDPPREIPQPVDNPKHLDEEAAGVDALPIKTSGEKPDVEETEATGEINADVGVESLCQAMESAWTEEVVADEGSSKQEASGRVAKQEENVMDALGGGGEYLDALGGVMAGTAAGKDVETRLTEGEDEEEEELDGGEVANGKHRAEGGREKRFEDDGGVEGVDNHXXXXXXXXXXXXDEWEPEGEGSVEEEASKTPPEAGAADEAVFVAGDFPVLGLGRGDAAASDLTTPLPTSAHSASPPAEEERSWSLLARSNPAPFKVPAKQDPTPLPAAAPVEQPVHTGLGNFVKGPPDGAKGAGTSRILSSAAAFGVSXXXXXXXXEDDEDGVGWVTPSNIKSHKAAGLGLNGPS-----------QFQRKVPVALASKCRAGCVTTDFAMQNVILQVGLPLLSLDGMAVRRVRQWILRCAACFKTCTEMGRLFCPVCGNASLDRVSCSVNAKTGATHVHLRKNRKVNLRGSKYSIPAPNPRKGRFEGDLLLREDQLLTGIWAQKAKRKEKDVSSMFGKDITGDVGLTVSRAS-DIMVGYGRKNPNAARGRERRGKKGIKNR 1938 A+ FWTVP V++EIRDKKARH L+ LP+ELKLREPS+EA+ FA GFAR+TGDLRSLSRVDL VIALTY LE++ETG +H++ P T R S +A P + D A P+ TS N + L QEEN G + +EELD ED G EG D+ SA P A+ R+ A +SRIL+ +++ GV+ ++DG+GWVTP+N K+ GL L+GP+ + R+ ALA +CRAGCVTTDFAMQNV+LQ+GLPLLS++GMAVRRV+ W+LRCAACFKT T+M +LFCPVCGN++LD+VSCSV+ TG +HL RK NLRG+KYSIP P GRF GDLLLREDQL++GIWAQK+KR K MFG+ I VGL++ + S ++VGYGRKNPN+ RGRERRGK G NR Sbjct: 51 AEQFWTVPAVLAEIRDKKARHLLDTLPYELKLREPSEEALSFAIGFARETGDLRSLSRVDLSVIALTYDLEKRETGAAHVKKTPKKTILRQPS-----AAAAAPPSAQXXXXXDA------------AQPVATS---------------NGSAAAQHL-----------------------------QEENT--------------GSDAQSASXXXXXXXXXXXXXXXPDEELD----------------MADEDYGSSEGEDD------------------------------------------------------------------------SAEPAAQAPRN--------------------------------------------------ALSSRILNISSSTGVTSVDAA-----EDDGIGWVTPANFAEVKSTGLSLSGPAPGGKSKGAKARRRAREDAKALA-QCRAGCVTTDFAMQNVLLQMGLPLLSVNGMAVRRVKHWVLRCAACFKTTTDMEKLFCPVCGNSTLDKVSCSVDGATGQMRLHLNPKRKPNLRGTKYSIPKPGV-SGRFNGDLLLREDQLMSGIWAQKSKRTVKSQGCMFGEHIMDGVGLSMGKQSAGVVVGYGRKNPNSQRGRERRGK-GSSNR 487
BLAST of mRNA_H-elongata_contig10315.264.1 vs. uniprot
Match: A0A7S3XQN7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQN7_HETAK) HSP 1 Score: 225 bits (573), Expect = 6.960e-65 Identity = 115/204 (56.37%), Postives = 147/204 (72.06%), Query Frame = 1 Query: 1318 HKAAGLGLNGPSQFQRKVPVALASKCRAGCVTTDFAMQNVILQVGLPLLSLDGMAVRRVRQWILRCAACFKTCTEMGRLFCPVCGNASLDRVSCSVNAKTGATHVHLRKN--RKVNLRGSKYSIPAPNPRKGRFEGDLLLREDQLLTGIWAQKAKRKEKDVSSMFGKDITGDVGLTVSRASDIMVGYGRKNPNAARGRERRGKK 1923 H AG GL + P + AGC TTDFAMQNV++Q+GLPLLS+DGM VRRV+QW+LRC ACFK +M RLFCP CG +L +VS S++A+TG +HLRK R G++YS+PAP + GRF+G+LLLREDQL GIW QKA R +K+VSS FG+DIT + G+ V++A DI+VG+GR+NPN +GRERRGKK Sbjct: 3 HLMAGGGLTAARGAPARPPPLTTA---AGCATTDFAMQNVLVQIGLPLLSVDGMVVRRVKQWVLRCHACFKLTHDMTRLFCPTCGGPTLQKVSVSLDARTGRAKLHLRKKGRRPPAQAGARYSLPAPG-KAGRFQGELLLREDQLKMGIWQQKANRTKKNVSSAFGEDITQNFGMNVNKAPDIVVGFGRRNPNQMKGRERRGKK 202
BLAST of mRNA_H-elongata_contig10315.264.1 vs. uniprot
Match: A0A8K1FH82_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FH82_PYTOL) HSP 1 Score: 227 bits (578), Expect = 3.570e-62 Identity = 196/643 (30.48%), Postives = 271/643 (42.15%), Query Frame = 1 Query: 1 AQNFWTVPEVVSEIRDKKARHHLEILPFELKLREPSDEAMRFAAGFARQTGDLRSLSRVDLRVIALTYMLERQETGGSHLRTAPVPTGTRVNSKSTGVSATTLDPPREIPQPVDNPKHLDEEAAGVDALPIKTSGEKPDVEETEATGEINADVGVESLCQAMESAWTEEVVADEGSSKQEASGRVAKQEENVMDALGGGGEYLDALGGVMAGTAAGKDVETRLTEGEDEEEEELDGGEVANGKHRAEGGREKRFEDDGGVEGVDNHXXXXXXXXXXXXDEWEPEGEGSVEEEASKTPPEAGAADEAVFVAGDFPVLGLGRGDAAASDLTTPLPTSAHSASPPAEEERSWSLLARSNPAPFKVPAKQDPTPLPAAAPVEQPVHTGLGNF-VKGPPDGAKGAGTSRILSSAAAFGVSXXXXXXXXEDDEDGVGWVTPSNIKSHKAAGLGLNGPSQ-FQRKVPVALASKCRAGCVTTDFAMQNVILQVGLPLLSLDGMAVRRVRQWILRCAACFKTCTEMGRLFCPVCGNASLDRVSCSVNAKTGATHVHLRKNRKVNLRGSKYSIPAPNPRKGRFEGDLLLREDQLLTGIWAQKAKRKEKDVSSMFGKDITGDVGLTVSRASDIMVGYGRKNPNAARGRERRGKK 1923 A+NFWTVP+VV+EIRDK+AR L+ LPF L+ REPS EAM+ A F+R+TGD SLS DLRV+ALTYMLE ++ G HL+ +P EA+ I D A+G++ + GG +Y G G G + K D+ +E A+K E GA + EEE +V D A A +QP+ + N VK SRILS+ A + +++DG W+ N + KA+ G + + ++PVA C+TTD++MQNV+LQ+GL LLS +GM ++RV+QWIL+C ACF T TEM RLFCP CGN++L+RVS S+ + G + R NR V L G+K+S+P P KG +GDLLLREDQL+ GIW Q+ ++ +K + S FG+++ D+G+ + + I+VGYGR NPNA RGRERRGKK Sbjct: 51 AENFWTVPDVVAEIRDKRARAILDALPFTLQTREPSAEAMKAVANFSRKTGDFASLSLTDLRVMALTYMLETEQNGTDHLKESP-----------------------------------------------------------EASATITRD----------------------------ANGKI----------VSGGPQYPCKFFGTAIGCKYGDEC--------------------------------KFIHDESVLE-------------------------------ANKA--EDGAKPKVAIXXXXXXXXXXXXXXXXXXXXXEK------------EEE--------------EVEMNDDDFDAEAVAAFDQPIPEEIRNADVK-----------SRILSTGFAASSTAGA------NEDDGKNWINAVNYSNFKASPFGDGKNLETIRHELPVA--------CITTDYSMQNVMLQIGLRLLSTEGMIIKRVKQWILKCIACFTTTTEMERLFCPKCGNSTLERVSYSIG-QDGQMVFYHRTNRPVKLTGTKFSLPKP---KGGRQGDLLLREDQLMMGIWGQRQRQHKKVMQSAFGENMAHDLGVKAEKNTSIVVGYGRMNPNAQRGRERRGKK 476
BLAST of mRNA_H-elongata_contig10315.264.1 vs. uniprot
Match: A0A1Z5K7V9_FISSO (RNA-binding protein NOB1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7V9_FISSO) HSP 1 Score: 229 bits (585), Expect = 9.740e-62 Identity = 220/682 (32.26%), Postives = 301/682 (44.13%), Query Frame = 1 Query: 1 AQNFWTVPEVVSEIRDKKARHHLEILPFELKLREPSDEAMRFAAGFARQTGDLRSLSRVDLRVIALTYMLERQETGG--SHLRTAPVPTGTRVNSKSTGVSATTLDPPREIP-QPVDNPKHLDEEAAGVDALPIKTSGEKPDVEET--EATGEINADVGVESLCQAMESAWTEEVVADEGSSKQEASGRVAKQEENVMDALGGGGEYLDALGGVMAGTAAGKDVETRLTEGEDEEEEELDGGEVANGKHR--AEGGREKRFEDDGGVEGVDNHXXXXXXXXXXXXDEWEPEGEGSVEEEASKTPPEAGAADEAVFVAGDFPVLGLGR------GDAAASDLTTPLPTSAHSASPPAEEERSWSLLARSNPAPFKVPAKQD---PTPLPAAAPVEQPVHTGLG----NFVKGPPDGAKGAGTSRILSSAAAFGVSXXXXXXXXEDDEDGVGWVTPSN-IKSHKAAGL--GLNGPSQFQRKVPVALAS----KCRAGCVTTDFAMQNVILQVGLPLLSLDGMAVRRVRQWILRCAACFKTCTEMG--------RLFCPVCGNASLDRVSCSVNAKTGATHVHLRKNRKVNLRGSKYSIPAPNPRKGRFEGDLLLREDQLLTGIWAQKAK-----RKEKDVSSMFGKDITGDVGL-TVSRASDIMVGYGRKNPNAARGRERRGKK 1923 A F+TVP V+ EIRD KAR HL+ LPFEL+ REPS EA++ FARQTGD +SLS VDL+V+ L Y LER+ G H+R P + GV + E+ + D + D E DA P+++ D + +G D VE W V EGSS L + + A +DV ++ GK A GG+ EDD V N+ ++++E DFP L + R GD D P+ A + +++S +++S QD P P P P + N K + K SRI+ G + ++DG GW+T +N +K+ K+AG+ PS K + RA C TTDFAMQNVILQ+ L LLS+DG+ VR+++ W+ RC AC+K T RLFC CG+ + R++ SV+ KTG +HL K K NLRG+K+S+P P RF GDLLLREDQL+ G W QK K + + SMFG+DI +VG T + +DI VG+GR+NPN A+GRERRGKK Sbjct: 34 AHQFYTVPAVLQEIRDAKAREHLDSLPFELQAREPSKEAVQTVIDFARQTGDYQSLSVVDLQVLGLLYDLEREGCHGVIDHIRKTP--------KRMLGVGKVEMLVKNEVSTEEYDVEEVSDSEDEEDDAEPVESVTIYADEQRACIPPSGVSETDEPVEPKT------WAMLVNPKEGSSD------------------------LPKITPTVPNPALTEDVMSKPF-----------------GKMNLSASGGQFSDAEDDEFETSVANNNNDHD----------------ALQKELQS----------------DFPSLLVARLVPYEGGD---DDQLEPVDLEAQRRADELRKQQSLKPISKSGKLYNSFRGYQDLLKPKPKPLKKATTSPEDSAESAIQHNHDK---EDEKKPQESRIMGGMTVAGQDG-------DVEDDGEGWITSTNELKAMKSAGVLDPQRNPSHLDMKANAPIVHGPPISQRAACATTDFAMQNVILQMNLELLSVDGVKVRKLKSWVTRCGACYKIYTNADNAGPFGSKRLFCERCGSDFMQRIAASVDGKTGRLRLHLSKKYKHNLRGTKFSLPKPGT-GNRFHGDLLLREDQLMMGAWNQKVKISSGGKAKNAAQSMFGRDIATNVGCYTTATNTDIKVGFGRRNPNEAKGRERRGKK 614
BLAST of mRNA_H-elongata_contig10315.264.1 vs. uniprot
Match: A0A1W0A030_9STRA (RNA-binding protein NOB1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A030_9STRA) HSP 1 Score: 224 bits (572), Expect = 2.320e-61 Identity = 118/240 (49.17%), Postives = 158/240 (65.83%), Query Frame = 1 Query: 1204 SRILSSAAAFGVSXXXXXXXXEDDEDGVGWVTPSNIKSHKAAGLGLNGPSQFQRKVPVALASKCRAGCVTTDFAMQNVILQVGLPLLSLDGMAVRRVRQWILRCAACFKTCTEMGRLFCPVCGNASLDRVSCSVNAKTGATHVHLRKNRKVNLRGSKYSIPAPNPRKGRFEGDLLLREDQLLTGIWAQKAKRKEKDVSSMFGKDITGDVGLTVSRASDIMVGYGRKNPNAARGRERRGKK 1923 SRILS A F S DD+DG WV N + ++ G G S Q + K + GC+TTD++MQNV+LQ+GL LLS DGM ++RV+QW+L+CAAC+KT TE+ R FCPVCGNA+L+RV+CS++ T ++ R NR LRG+K+S+P P KG +GD+LLREDQLL GIW Q+ K K + S FG+ + D+G+ V + + I +GYGR NPNA +GRERRGKK Sbjct: 250 SRILS--AGFAASSNAGA----DDDDGKNWVNVENSTQYTSSPFGT-GTSVDQ------VDEKTKVGCITTDYSMQNVMLQMGLNLLSTDGMVIKRVKQWVLKCAACYKTTTELTRQFCPVCGNATLERVACSLDKDTEQLTLYTRANRPTKLRGTKFSLPMP---KGGRQGDILLREDQLLHGIWGQRQKASSKVMKSAFGEHVAHDLGVKVEKQTSITIGYGRMNPNAQKGRERRGKK 473
BLAST of mRNA_H-elongata_contig10315.264.1 vs. uniprot
Match: A0A6G0W830_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W830_9STRA) HSP 1 Score: 223 bits (569), Expect = 4.440e-61 Identity = 192/641 (29.95%), Postives = 261/641 (40.72%), Query Frame = 1 Query: 1 AQNFWTVPEVVSEIRDKKARHHLEILPFELKLREPSDEAMRFAAGFARQTGDLRSLSRVDLRVIALTYMLERQETGGSHLRTAPVPTGTRVNSKSTGVSATTLDPPREIPQPVDNPKHLDEEAAGVDALPIKTSGEKPDVEETEATGEINADVGVESLCQAMESAWTEEVVADEGSSKQEASGRVAKQEENVMDALGGGGEYLDALGGVMAGTAAGKDVETRLTEGEDEEEEELDGGEVANGKHRAEGGREKRFEDDGGVEGVDNHXXXXXXXXXXXXDEWEPEGEGSVEEEASKTPPEAGAADEAVFVAGDFPVLGLGRGDAAASDLTTPLPTSAHSASPPAEEERSWSLLARSNPAPFKVPAKQDPTPLPAAAPVEQPVHTGLGNFVKGPPDGAKGAGTSRILSSAAAFGVSXXXXXXXXEDDEDGVGWVTPSNIKSHKAAGLGLNGPSQFQRKVPVALASKCRAGCVTTDFAMQNVILQVGLPLLSLDGMAVRRVRQWILRCAACFKTCTEMGRLFCPVCGNASLDRVSCSVNAKTGATHVHLRKNRKVNLRGSKYSIPAPNPRKGRFEGDLLLREDQLLTGIWAQKAKRKEKDVSSMFGKDITGDVGLTVSRASDIMVGYGRKNPNAARGRERRGKK 1923 A+N WT +V++EI+D KAR + LP ELK R+PS++ M F+R TGD LS DLR++ALTYM ER+ G H+RTAP + T+V TG A PP ++ ++L + S D T+ +I+A V KDVE + E E EA K D+AV E S A +P P+ + + VK SRILS A F + +D+DG WV +N + + G N K A+ S + GC+TTD++MQNV+LQ+GL L+S DGM + RV+QWIL+CAACFKT TE+ R FCPVCGN +L+R+SCS++ T ++ R NR + LRGSK+S+P P G GDLLLREDQL+ GIWAQ+ K K + S FG+ + D+G+ + + I VG+GR NPNA +GRERRGKK Sbjct: 24 AENLWTTSDVLAEIKDSKARRFVARLPVELKTRDPSEKDMEAVVAFSRLTGDFSFLSLTDLRIMALTYMFERETNGVEHIRTAPKVSETKV----TGPKA----PPAKV-----RCRYLHTPGGCRNGASCPFSHNLNDNAVTQPLPKIDAPXXXXXXXXXXXX------------------------------------XXXXXXXHVKVQETTDKDVEEKTDE----------------------------------------------------------------EGEAEK--------DKAV--------------------------------------ENSTESAA-----------------IPPPVPISNAIRSA---DVK-----------SRILS--AGFNAASNAGA----EDDDGKNWVNAANQAEYSQSPFGSN-------KEVKAIDSTIQVGCITTDYSMQNVLLQMGLHLISTDGMVINRVKQWILKCAACFKTTTELTRQFCPVCGNHTLERISCSLDKDTEQLTLYTRANRPMKLRGSKFSLPMPT---GGRNGDLLLREDQLMHGIWAQRQKSSAKVLKSAFGEHVAHDLGVKAEKQTSITVGFGRMNPNAQKGRERRGKK 458
BLAST of mRNA_H-elongata_contig10315.264.1 vs. uniprot
Match: A0A067BW92_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BW92_SAPPC) HSP 1 Score: 222 bits (565), Expect = 1.110e-60 Identity = 113/240 (47.08%), Postives = 153/240 (63.75%), Query Frame = 1 Query: 1204 SRILSSAAAFGVSXXXXXXXXEDDEDGVGWVTPSNIKSHKAAGLGLNGPSQFQRKVPVALASKCRAGCVTTDFAMQNVILQVGLPLLSLDGMAVRRVRQWILRCAACFKTCTEMGRLFCPVCGNASLDRVSCSVNAKTGATHVHLRKNRKVNLRGSKYSIPAPNPRKGRFEGDLLLREDQLLTGIWAQKAKRKEKDVSSMFGKDITGDVGLTVSRASDIMVGYGRKNPNAARGRERRGKK 1923 SRILS+ A DD+DG WV N + G + + + GC+TTD++MQNV+LQ+GL LLS DGM ++RV+QW+L+C ACFKT TE+ R FCPVCGNA+L+RV+CS++ +T ++ R NR LRG+K+S+PAP KG +GDLLLREDQL+ GIW Q+ K K + S FG+ + D+G+ V + + I +GYGR NPNA +GRERRGKK Sbjct: 220 SRILSAGFAA------QSNVGADDDDGKNWVNVENATQFTTSPFGTGTAVE-------KVDENMKVGCITTDYSMQNVMLQMGLHLLSTDGMVIKRVKQWVLKCVACFKTTTELERQFCPVCGNATLERVACSLDKETEQLTLYTRANRPTKLRGTKFSLPAP---KGGRQGDLLLREDQLMHGIWGQRQKASSKVMKSAFGEHVAHDLGVKVEKQTSITIGYGRMNPNAQKGRERRGKK 443
BLAST of mRNA_H-elongata_contig10315.264.1 vs. uniprot
Match: A0A6A3JDU7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JDU7_9STRA) HSP 1 Score: 223 bits (568), Expect = 1.400e-60 Identity = 205/646 (31.73%), Postives = 262/646 (40.56%), Query Frame = 1 Query: 1 AQNFWTVPEVVSEIRDKKARHHLEILPFELKLREPSDEAMRFAAGFARQTGDLRSLSRVDLRVIALTYMLERQETGGSHLRTAPV--PTGTRV-NSKSTGVSATTLDPPREIPQPVDNPKHLDEEAAGVDALPIKTSGEKPDVEETEATGEINADVGVESLCQAMESAWTEEVVADEGSSKQEASGRVAKQEENVMDALGGGGEYLDALGGVMAGTAAGKDVETRLTEGEDEEEEELDGGEVANGKHRAEGGREKRFEDDGGVEGVDNHXXXXXXXXXXXXDEWEPEGEGSVEEEASKTPPEAGAADEAVFVAGDFPVLGLGRGDAAASDLTTPLPTSAHSASPPAEEERSWSLLARSNPAPFKVPAKQDPTPLPAAAPVEQPVHTGLGNF-VKGPPDGAKGAGTSRILSSAAAFGVSXXXXXXXXEDDEDGVGWVTPSNIKSHKAAGLGLN-GPSQFQRKVPVALASKCRAGCVTTDFAMQNVILQVGLPLLSLDGMAVRRVRQWILRCAACFKTCTEMGRLFCPVCGNASLDRVSCSVNAKTGATHVHLRKNRKVNLRGSKYSIPAPNPRKGRFEGDLLLREDQLLTGIWAQKAKRKEKDVSSMFGKDITGDVGLTVSRASDIMVGYGRKNPNAARGRERRGKK 1923 A+NFWTVP+V+ EIRDKK+R LE LPF L+ REPS EAM+ F+R+TGD LS DLRV+AL+Y LE + G HLRT+P T TR N K G S T P K G A G D E +T + A K EE DA + +D E EE E P+EE T PAA EQ + + N VK SRI+ AA + D+DG W+T N A+ G G + ++PVA C+TTDF+MQNV+LQ+GL LLS +GM ++RV+QWILRC ACF T TEM RLFCP CGN+++DRVS S++ + G + R NR L G+KYS+P P KG GDLLLREDQLL GIW Q+ ++ +K + S FG+++ D+G+ R + I+VGYGR NPNA +GRERRGKK Sbjct: 72 AENFWTVPDVLDEIRDKKSRAILERLPFTLQTREPSAEAMKAVVNFSRKTGDFAYLSLTDLRVMALSYQLEVEANGADHLRTSPELSQTVTRAANGKIVGGSQTNF--------------------------PCKYFGT--------AMGCKYGD----------ECRFTHDEAA-------------VKAEEGAADATK---KKVDIXXXXXXXXXXXXXXXXXXXXXEKTEETET-----------------------------------------------------------------------------------------------------------PSEE-----------------------TEEPAA---EQVISEEIRNADVK-----------SRIMGGFAASSNAGAA-------DDDGKNWITGDNFGKFTASPFGDGKGLEEIASRLPVA--------CITTDFSMQNVMLQIGLRLLSTEGMIIKRVKQWILRCIACFTTSTEMDRLFCPKCGNSTMDRVSYSLD-RDGHMTFYTRANRPTKLSGTKYSLPKP---KGGRNGDLLLREDQLLVGIWGQRQRQHKKVMQSAFGENVAHDLGVKAERQTGIVVGYGRMNPNAQKGRERRGKK 494 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10315.264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10315.264.1 >prot_H-elongata_contig10315.264.1 ID=prot_H-elongata_contig10315.264.1|Name=mRNA_H-elongata_contig10315.264.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=609bp MRFAAGFARQTGDLRSLSRVDLRVIALTYMLERQETGGSHLRTAPVPTGTback to top mRNA from alignment at H-elongata_contig10315:3051..8211- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10315.264.1 ID=mRNA_H-elongata_contig10315.264.1|Name=mRNA_H-elongata_contig10315.264.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5161bp|location=Sequence derived from alignment at H-elongata_contig10315:3051..8211- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10315:3051..8211- >mRNA_H-elongata_contig10315.264.1 ID=mRNA_H-elongata_contig10315.264.1|Name=mRNA_H-elongata_contig10315.264.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3654bp|location=Sequence derived from alignment at H-elongata_contig10315:3051..8211- (Himanthalia elongata Himel1 dioecious)back to top |