Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-13_004690.1 |
| Exons | 1 |
| Model size | 324 |
| Cds size | 324 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929562.4251971-CDS-H-elongata_contig102431:1753..2077 | 1622929562.4251971-CDS-H-elongata_contig102431:1753..2077 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig102431 1754..2077 + |
| 1691679071.3985195-CDS-H-elongata_contig102431:1753..2077 | 1691679071.3985195-CDS-H-elongata_contig102431:1753..2077 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig102431 1754..2077 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig102431.214.1 >prot_H-elongata_contig102431.214.1 ID=prot_H-elongata_contig102431.214.1|Name=mRNA_H-elongata_contig102431.214.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp
WRITGVVDTHTNCSGWAAKGKPAALQGIVADAMRDNPQLSGVDIKRKLER
TGLKVADRTATRMKNVAKKAHQAALAGSYQQFPSLCALLQQRSPGTVAEV
EVSRSID* back to topmRNA from alignment at H-elongata_contig102431:1754..2077+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-elongata_contig102431.214.1 ID=mRNA_H-elongata_contig102431.214.1|Name=mRNA_H-elongata_contig102431.214.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=324bp|location=Sequence derived from alignment at H-elongata_contig102431:1754..2077+ (Himanthalia elongata Himel1 dioecious)
TGGCGGATCACGGGTGTAGTGGACACACACACCAACTGTTCCGGTTGGGC
GGCGAAGGGGAAGCCGGCTGCCCTACAGGGCATAGTCGCTGACGCCATGA
GGGACAACCCTCAGCTATCGGGTGTGGATATCAAGCGCAAGCTAGAGAGG
ACGGGACTTAAAGTGGCGGACCGCACAGCCACAAGAATGAAGAACGTCGC
AAAGAAGGCACACCAGGCGGCGTTGGCTGGGTCATACCAGCAATTCCCTT
CTCTCTGCGCGCTGCTTCAGCAGAGGTCCCCAGGAACCGTCGCCGAAGTA
GAAGTGAGCAGGAGTATAGACTAA back to topCoding sequence (CDS) from alignment at H-elongata_contig102431:1754..2077+ >mRNA_H-elongata_contig102431.214.1 ID=mRNA_H-elongata_contig102431.214.1|Name=mRNA_H-elongata_contig102431.214.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=648bp|location=Sequence derived from alignment at H-elongata_contig102431:1754..2077+ (Himanthalia elongata Himel1 dioecious)
TGGCGGATCACGGGTGTAGTGGACACACACACCAACTGTTCCGGTTGGGC
GGCGAAGGGGAAGCCGGCTGCCCTACAGGGCATAGTCGCTGACGCCATGA
GGGACAACCCTCAGCTATCGGGTGTGGATATCAAGCGCAAGCTAGAGAGG
ACGGGACTTAAAGTGGCGGACCGCACAGCCACAAGAATGAAGAACGTCGC
AAAGAAGGCACACCAGGCGGCGTTGGCTGGGTCATACCAGCAATTCCCTT
CTCTCTGCGCGCTGCTTCAGCAGAGGTCCCCAGGAACCGTCGCCGAAGTA
GAAGTGAGCAGGAGTATAGACTAATGGCGGATCACGGGTGTAGTGGACAC
ACACACCAACTGTTCCGGTTGGGCGGCGAAGGGGAAGCCGGCTGCCCTAC
AGGGCATAGTCGCTGACGCCATGAGGGACAACCCTCAGCTATCGGGTGTG
GATATCAAGCGCAAGCTAGAGAGGACGGGACTTAAAGTGGCGGACCGCAC
AGCCACAAGAATGAAGAACGTCGCAAAGAAGGCACACCAGGCGGCGTTGG
CTGGGTCATACCAGCAATTCCCTTCTCTCTGCGCGCTGCTTCAGCAGAGG
TCCCCAGGAACCGTCGCCGAAGTAGAAGTGAGCAGGAGTATAGACTAA back to top
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