Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 636 |
| Cds size | 330 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929561.5321054-UTR-H-elongata_contig102331:900..1118 | 1622929561.5321054-UTR-H-elongata_contig102331:900..1118 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig102331 901..1118 + |
| 1691679070.996133-UTR-H-elongata_contig102331:900..1118 | 1691679070.996133-UTR-H-elongata_contig102331:900..1118 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig102331 901..1118 + |
| 1622929561.5626993-UTR-H-elongata_contig102331:1448..1536 | 1622929561.5626993-UTR-H-elongata_contig102331:1448..1536 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig102331 1449..1536 + |
| 1691679071.0190287-UTR-H-elongata_contig102331:1448..1536 | 1691679071.0190287-UTR-H-elongata_contig102331:1448..1536 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig102331 1449..1536 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929561.5481231-CDS-H-elongata_contig102331:1118..1448 | 1622929561.5481231-CDS-H-elongata_contig102331:1118..1448 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig102331 1119..1448 + |
| 1691679071.007907-CDS-H-elongata_contig102331:1118..1448 | 1691679071.007907-CDS-H-elongata_contig102331:1118..1448 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig102331 1119..1448 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig102331.204.1 >prot_H-elongata_contig102331.204.1 ID=prot_H-elongata_contig102331.204.1|Name=mRNA_H-elongata_contig102331.204.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=110bp
MFSGLTSESGGARPLPRIHFPTEISPRRLHRYSRTSPIRLPQNEFFAREG
AVCLPQHLLGSLSAPFSLQLCLCNFRALNRAAIPPRSQFLLLSEKKCKFP
YRRRTRYLV* back to topmRNA from alignment at H-elongata_contig102331:901..1536+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-elongata_contig102331.204.1 ID=mRNA_H-elongata_contig102331.204.1|Name=mRNA_H-elongata_contig102331.204.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=636bp|location=Sequence derived from alignment at H-elongata_contig102331:901..1536+ (Himanthalia elongata Himel1 dioecious)
CTCGAGAGTTAGGAAAAAAAAGTGACTGAGCGAGCTTGCTTCTTTATATA
CTGTTTAAATAAGTTCGGTCGAGTGGCCTCTAGACGCACTGCTGCATTGG
GACAATGGACTATCTCGGGATTGGCGGGCCAACTCTTCTTGGAGCGCCAC
TCTATCCCATCTCAGCGTAACCACGTGAGTGTTACCAGTACCACTGTCAA
TAAAAGCGTACACCCTCAATGTTTTCGGGGCTGACATCTGAATCTGGAGG
CGCTCGACCTCTCCCCCGGATTCACTTTCCCACAGAAATATCGCCACGGA
GACTCCATAGGTACAGTAGGACGTCGCCCATTCGCCTACCTCAGAATGAG
TTTTTCGCTCGAGAAGGCGCTGTCTGCCTACCTCAGCATCTTTTGGGCAG
CCTTTCCGCTCCTTTTTCTTTGCAGCTTTGCCTCTGCAATTTCCGTGCGC
TCAACCGTGCAGCGATTCCCCCACGAAGTCAATTTCTCCTGCTCTCCGAA
AAAAAATGCAAGTTTCCATATCGACGAAGAACACGATATCTTGTTTGAAT
AAGTTCGGCCGAGTGGCCTGACGTTGACACTCTATAACAGGGTTCACGTG
GAGGTATATGTAATTGACGTACTTGATGCTTTAACT back to topCoding sequence (CDS) from alignment at H-elongata_contig102331:901..1536+ >mRNA_H-elongata_contig102331.204.1 ID=mRNA_H-elongata_contig102331.204.1|Name=mRNA_H-elongata_contig102331.204.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=660bp|location=Sequence derived from alignment at H-elongata_contig102331:901..1536+ (Himanthalia elongata Himel1 dioecious)
ATGTTTTCGGGGCTGACATCTGAATCTGGAGGCGCTCGACCTCTCCCCCG
GATTCACTTTCCCACAGAAATATCGCCACGGAGACTCCATAGGTACAGTA
GGACGTCGCCCATTCGCCTACCTCAGAATGAGTTTTTCGCTCGAGAAGGC
GCTGTCTGCCTACCTCAGCATCTTTTGGGCAGCCTTTCCGCTCCTTTTTC
TTTGCAGCTTTGCCTCTGCAATTTCCGTGCGCTCAACCGTGCAGCGATTC
CCCCACGAAGTCAATTTCTCCTGCTCTCCGAAAAAAAATGCAAGTTTCCA
TATCGACGAAGAACACGATATCTTGTTTGAATGTTTTCGGGGCTGACATC
TGAATCTGGAGGCGCTCGACCTCTCCCCCGGATTCACTTTCCCACAGAAA
TATCGCCACGGAGACTCCATAGGTACAGTAGGACGTCGCCCATTCGCCTA
CCTCAGAATGAGTTTTTCGCTCGAGAAGGCGCTGTCTGCCTACCTCAGCA
TCTTTTGGGCAGCCTTTCCGCTCCTTTTTCTTTGCAGCTTTGCCTCTGCA
ATTTCCGTGCGCTCAACCGTGCAGCGATTCCCCCACGAAGTCAATTTCTC
CTGCTCTCCGAAAAAAAATGCAAGTTTCCATATCGACGAAGAACACGATA
TCTTGTTTGA back to top
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