mRNA_H-elongata_contig102164.194.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig102164.194.1 vs. uniprot
Match: A0A1B6LFS8_9HEMI (Uncharacterized protein (Fragment) n=2 Tax=Ecdysozoa TaxID=1206794 RepID=A0A1B6LFS8_9HEMI) HSP 1 Score: 280 bits (716), Expect = 1.860e-90 Identity = 151/206 (73.30%), Postives = 155/206 (75.24%), Query Frame = 1 Query: 1 QTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSMPVEEQPKQIIVTRKGMLDPLEVHMLDFPNIVIKAGFLYPPSRYIYRFRYYQFGLLPVEISKSFIFTTVRIYKHTVLCIYIYILQGSELQLPFQACLKVEKFGDLILKATEPQMVLFNIYDDWLKTISSYTAFSRLILILRALHVN 618 +TFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRS+PVEEQPKQIIVTRKGMLDPLEVH+LDFPNIVIK GSELQLPFQACLKVEKFGDLILKATEPQMVLFN+YDDWLKTISSYTAFSRLILILRALHVN Sbjct: 221 KTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIK---------------------------------------------------GSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVN 375
BLAST of mRNA_H-elongata_contig102164.194.1 vs. uniprot
Match: A0A3S5CQJ9_9PLAT (Hypothetical protein n=1 Tax=Protopolystoma xenopodis TaxID=117903 RepID=A0A3S5CQJ9_9PLAT) HSP 1 Score: 280 bits (716), Expect = 5.330e-90 Identity = 151/206 (73.30%), Postives = 155/206 (75.24%), Query Frame = 1 Query: 1 QTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSMPVEEQPKQIIVTRKGMLDPLEVHMLDFPNIVIKAGFLYPPSRYIYRFRYYQFGLLPVEISKSFIFTTVRIYKHTVLCIYIYILQGSELQLPFQACLKVEKFGDLILKATEPQMVLFNIYDDWLKTISSYTAFSRLILILRALHVN 618 +TFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRS+PVEEQPKQIIVTRKGMLDPLEVH+LDFPNIVIK GSELQLPFQACLKVEKFGDLILKATEPQMVLFN+YDDWLKTISSYTAFSRLILILRALHVN Sbjct: 98 KTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIK---------------------------------------------------GSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVN 252
BLAST of mRNA_H-elongata_contig102164.194.1 vs. uniprot
Match: A0A392PPY1_9FABA (Pre-mRNA-processing-splicing factor 8-like (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392PPY1_9FABA) HSP 1 Score: 270 bits (691), Expect = 6.710e-90 Identity = 142/206 (68.93%), Postives = 151/206 (73.30%), Query Frame = 1 Query: 1 QTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSMPVEEQPKQIIVTRKGMLDPLEVHMLDFPNIVIKAGFLYPPSRYIYRFRYYQFGLLPVEISKSFIFTTVRIYKHTVLCIYIYILQGSELQLPFQACLKVEKFGDLILKATEPQMVLFNIYDDWLKTISSYTAFSRLILILRALHVN 618 QTFEGNLT KPING F+FNPRTGQLFLK+IHTSVWAGQKRLGQLAKWKTAEEVAAL+RS+P EEQPKQ+IVTRKGMLDPLEVH+LDFPNIVIK GSELQLPFQACLK+EKFGDLILKATEPQMVLFNIYDDWLK+ISSYTAFSRLILILRALH+N Sbjct: 3 QTFEGNLTAKPINGVAFVFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPXEEQPKQVIVTRKGMLDPLEVHLLDFPNIVIK---------------------------------------------------GSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISSYTAFSRLILILRALHLN 157
BLAST of mRNA_H-elongata_contig102164.194.1 vs. uniprot
Match: A0A804JX52_MUSAM (PRP8_domainIV domain-containing protein n=2 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804JX52_MUSAM) HSP 1 Score: 278 bits (711), Expect = 4.250e-89 Identity = 147/206 (71.36%), Postives = 155/206 (75.24%), Query Frame = 1 Query: 1 QTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSMPVEEQPKQIIVTRKGMLDPLEVHMLDFPNIVIKAGFLYPPSRYIYRFRYYQFGLLPVEISKSFIFTTVRIYKHTVLCIYIYILQGSELQLPFQACLKVEKFGDLILKATEPQMVLFNIYDDWLKTISSYTAFSRLILILRALHVN 618 +TFEGNLTTKPINGAIFIFNPRTGQLFLK+IHTSVWAGQKRLGQLAKWKTAEEVAAL+RS+PVEEQPKQIIVTRKGMLDPLEVH+LDFPNIVIK GSELQLPFQACLK++KFGDLILKATEPQMVLFNIYDDWLKTISSYTAFSRL+LILRALHVN Sbjct: 180 RTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIK---------------------------------------------------GSELQLPFQACLKIDKFGDLILKATEPQMVLFNIYDDWLKTISSYTAFSRLVLILRALHVN 334
BLAST of mRNA_H-elongata_contig102164.194.1 vs. uniprot
Match: M4BI32_HYAAE (PRP8_domainIV domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BI32_HYAAE) HSP 1 Score: 276 bits (705), Expect = 9.880e-89 Identity = 149/206 (72.33%), Postives = 154/206 (74.76%), Query Frame = 1 Query: 1 QTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSMPVEEQPKQIIVTRKGMLDPLEVHMLDFPNIVIKAGFLYPPSRYIYRFRYYQFGLLPVEISKSFIFTTVRIYKHTVLCIYIYILQGSELQLPFQACLKVEKFGDLILKATEPQMVLFNIYDDWLKTISSYTAFSRLILILRALHVN 618 +TFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRS+PVEEQPKQIIVTRKGMLDPLEVH+LDFPNIVIK GSELQLPFQACLKVEKFGDLILKATEPQMVLFNIYDDWL TI+SYTAFSRLILILRALHV+ Sbjct: 101 KTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIK---------------------------------------------------GSELQLPFQACLKVEKFGDLILKATEPQMVLFNIYDDWLNTITSYTAFSRLILILRALHVS 255
BLAST of mRNA_H-elongata_contig102164.194.1 vs. uniprot
Match: A0A816GUV8_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A816GUV8_9BILA) HSP 1 Score: 275 bits (704), Expect = 1.320e-88 Identity = 147/206 (71.36%), Postives = 155/206 (75.24%), Query Frame = 1 Query: 1 QTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSMPVEEQPKQIIVTRKGMLDPLEVHMLDFPNIVIKAGFLYPPSRYIYRFRYYQFGLLPVEISKSFIFTTVRIYKHTVLCIYIYILQGSELQLPFQACLKVEKFGDLILKATEPQMVLFNIYDDWLKTISSYTAFSRLILILRALHVN 618 +T+EGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRS+PVEEQPKQIIVTRKGMLDPLEVH+LDFPNIVIK GSELQLPFQACLKVEKFGDLILKATEPQMV+FN+YDDWLK+ISSYTAFSRLILIL+ALHVN Sbjct: 171 KTYEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIK---------------------------------------------------GSELQLPFQACLKVEKFGDLILKATEPQMVMFNLYDDWLKSISSYTAFSRLILILKALHVN 325
BLAST of mRNA_H-elongata_contig102164.194.1 vs. uniprot
Match: T1HL43_RHOPR (MPN domain-containing protein n=3 Tax=Arthropoda TaxID=6656 RepID=T1HL43_RHOPR) HSP 1 Score: 280 bits (716), Expect = 2.360e-88 Identity = 151/206 (73.30%), Postives = 155/206 (75.24%), Query Frame = 1 Query: 1 QTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSMPVEEQPKQIIVTRKGMLDPLEVHMLDFPNIVIKAGFLYPPSRYIYRFRYYQFGLLPVEISKSFIFTTVRIYKHTVLCIYIYILQGSELQLPFQACLKVEKFGDLILKATEPQMVLFNIYDDWLKTISSYTAFSRLILILRALHVN 618 +TFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRS+PVEEQPKQIIVTRKGMLDPLEVH+LDFPNIVIK GSELQLPFQACLKVEKFGDLILKATEPQMVLFN+YDDWLKTISSYTAFSRLILILRALHVN Sbjct: 171 KTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIK---------------------------------------------------GSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVN 325
BLAST of mRNA_H-elongata_contig102164.194.1 vs. uniprot
Match: A0A0R3SLQ0_HYMDI (Uncharacterized protein n=3 Tax=Platyhelminthes TaxID=6157 RepID=A0A0R3SLQ0_HYMDI) HSP 1 Score: 278 bits (712), Expect = 9.810e-88 Identity = 150/206 (72.82%), Postives = 155/206 (75.24%), Query Frame = 1 Query: 1 QTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSMPVEEQPKQIIVTRKGMLDPLEVHMLDFPNIVIKAGFLYPPSRYIYRFRYYQFGLLPVEISKSFIFTTVRIYKHTVLCIYIYILQGSELQLPFQACLKVEKFGDLILKATEPQMVLFNIYDDWLKTISSYTAFSRLILILRALHVN 618 +TFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRS+PVEEQPKQIIVTRKGMLDPLEVH+LDFPNIVIK GSELQLPFQACLKVEKFGDLILKATEPQMVLFN+YDDWLK+ISSYTAFSRLILILRALHVN Sbjct: 390 KTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIK---------------------------------------------------GSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKSISSYTAFSRLILILRALHVN 544
BLAST of mRNA_H-elongata_contig102164.194.1 vs. uniprot
Match: A0A0B7BM56_9EUPU (MPN domain-containing protein n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7BM56_9EUPU) HSP 1 Score: 280 bits (716), Expect = 1.290e-87 Identity = 151/206 (73.30%), Postives = 155/206 (75.24%), Query Frame = 1 Query: 1 QTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSMPVEEQPKQIIVTRKGMLDPLEVHMLDFPNIVIKAGFLYPPSRYIYRFRYYQFGLLPVEISKSFIFTTVRIYKHTVLCIYIYILQGSELQLPFQACLKVEKFGDLILKATEPQMVLFNIYDDWLKTISSYTAFSRLILILRALHVN 618 +TFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRS+PVEEQPKQIIVTRKGMLDPLEVH+LDFPNIVIK GSELQLPFQACLKVEKFGDLILKATEPQMVLFN+YDDWLKTISSYTAFSRLILILRALHVN Sbjct: 121 KTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIK---------------------------------------------------GSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVN 275
BLAST of mRNA_H-elongata_contig102164.194.1 vs. uniprot
Match: A0A833RT71_9HYME (MPN domain-containing protein n=1 Tax=Frieseomelitta varia TaxID=561572 RepID=A0A833RT71_9HYME) HSP 1 Score: 280 bits (716), Expect = 3.670e-87 Identity = 151/206 (73.30%), Postives = 155/206 (75.24%), Query Frame = 1 Query: 1 QTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSMPVEEQPKQIIVTRKGMLDPLEVHMLDFPNIVIKAGFLYPPSRYIYRFRYYQFGLLPVEISKSFIFTTVRIYKHTVLCIYIYILQGSELQLPFQACLKVEKFGDLILKATEPQMVLFNIYDDWLKTISSYTAFSRLILILRALHVN 618 +TFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRS+PVEEQPKQIIVTRKGMLDPLEVH+LDFPNIVIK GSELQLPFQACLKVEKFGDLILKATEPQMVLFN+YDDWLKTISSYTAFSRLILILRALHVN Sbjct: 169 KTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIK---------------------------------------------------GSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVN 323 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig102164.194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig102164.194.1 >prot_H-elongata_contig102164.194.1 ID=prot_H-elongata_contig102164.194.1|Name=mRNA_H-elongata_contig102164.194.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=206bp QTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTback to top mRNA from alignment at H-elongata_contig102164:77..1718- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig102164.194.1 ID=mRNA_H-elongata_contig102164.194.1|Name=mRNA_H-elongata_contig102164.194.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1642bp|location=Sequence derived from alignment at H-elongata_contig102164:77..1718- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig102164:77..1718- >mRNA_H-elongata_contig102164.194.1 ID=mRNA_H-elongata_contig102164.194.1|Name=mRNA_H-elongata_contig102164.194.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1236bp|location=Sequence derived from alignment at H-elongata_contig102164:77..1718- (Himanthalia elongata Himel1 dioecious)back to top |