mRNA_H-elongata_contig102036.185.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig102036.185.1
Unique NamemRNA_H-elongata_contig102036.185.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig102036.185.1 vs. uniprot
Match: A0A6H5K3H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H4_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 9.630e-87
Identity = 187/344 (54.36%), Postives = 213/344 (61.92%), Query Frame = 1
Query:   46 VCSSA--SDGFITPPACLARSFGAGDPFYSVERRLGSCGEEGRHQ----RRGEARRSATTPRP----------------GARWW---RSASTTGAPCRMKAAAGVQAASEAALLENDPSHRKQGSPGMPFDMHDDSDFYREMEELRSRKDTRSSSNSLRLLIDDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSEPLAFYLRNMAKVDLLKPHEEVILGRQIQKGVKYENTRDHLQLMRGKEPTEEEWALALGIDEEELSKELGRARKAKMAMLAANLRLVVSIAKRYRWRGLTFPDLIQEGTFGLVKASEKFDPERGFKFSTYATWWIKQSILRGVADQ 1002
            +C+SA  ++GF TPP CLAR  GAGD FYS ERRL +    GR      RRG  R       P                 ARW     + S + A   M AA   +   E   L   P       PGMPFDM DDS+FY EME  +    T +  + +                               XXXXXXX  + LAFYLR +AKVDLLKPHEE++LGRQIQKGV YENTRDHLQLMRG EPTEEEWA+ALG+D EEL KEL RA KAKMAMLAANLRLVVS+AKRYR++ L+F DLIQEGTFGLVKA+EKFDPERGFKFSTYATWWIKQSI+RG+ADQ
Sbjct:    1 MCASAPPAEGF-TPPVCLARVCGAGDAFYSAERRLAAGSGAGRDGGSGGRRGTMRGREAAAAPVARGALPAPPTRRRSTAARWMIQHPAPSRSAATRMMSAAVAAEPVEELDTLRPPPPQL----PGMPFDMRDDSEFYLEMERKKEAGPTYTRDSDM---------------VGLGKVSTKKSAKRDGXXXXXXXXXDALAFYLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMRGYEPTEEEWAVALGMDREELVKELSRASKAKMAMLAANLRLVVSVAKRYRFQKLSFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQ 324          
BLAST of mRNA_H-elongata_contig102036.185.1 vs. uniprot
Match: D8LNI6_ECTSI (Chloroplast RNA-polymerase sigma factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI6_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 1.190e-72
Identity = 122/146 (83.56%), Postives = 136/146 (93.15%), Query Frame = 1
Query:  565 EPLAFYLRNMAKVDLLKPHEEVILGRQIQKGVKYENTRDHLQLMRGKEPTEEEWALALGIDEEELSKELGRARKAKMAMLAANLRLVVSIAKRYRWRGLTFPDLIQEGTFGLVKASEKFDPERGFKFSTYATWWIKQSILRGVADQ 1002
            + LAFYLR +AKVDLLKPHEE++LGRQIQKGV YENTRDHLQLMRG EP+EEEWA+ALG+D EEL KEL RA KAKMAMLAANLRLVVS+AKRYR++ L+F DLIQEGTFGLVKA+EKFDPERGFKFSTYATWWIKQSI+RG+ADQ
Sbjct:   49 DALAFYLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMRGYEPSEEEWAVALGMDREELVKELSRASKAKMAMLAANLRLVVSVAKRYRFQKLSFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQ 194          
BLAST of mRNA_H-elongata_contig102036.185.1 vs. uniprot
Match: A0A835ZES3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES3_9STRA)

HSP 1 Score: 171 bits (433), Expect = 2.500e-46
Identity = 81/144 (56.25%), Postives = 112/144 (77.78%), Query Frame = 1
Query:  571 LAFYLRNMAKVDLLKPHEEVILGRQIQKGVKYENTRDHLQLMRGKEPTEEEWALALGIDEEELSKELGRARKAKMAMLAANLRLVVSIAKRYRWRGLTFPDLIQEGTFGLVKASEKFDPERGFKFSTYATWWIKQSILRGVADQ 1002
            L++YL  M+ +DLLKP EEV LGR IQ G+++E  ++ L +   ++P+  EWA  +G+DE+ L   + R+ +AK  M++ANLRL VSIAKRY+ RGL   DL+QEG+FGL+KA+E+FDP++GFKFSTYATWWIKQSI+R +ADQ
Sbjct:   58 LSWYLSRMSAIDLLKPEEEVTLGRHIQLGLEWEAAKEELAVRLERQPSRAEWAAHMGVDEDTLKLIMIRSSRAKTTMISANLRLAVSIAKRYKHRGLALSDLVQEGSFGLMKAAERFDPDKGFKFSTYATWWIKQSIMRAIADQ 201          
BLAST of mRNA_H-elongata_contig102036.185.1 vs. uniprot
Match: A0A835ZBY3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBY3_9STRA)

HSP 1 Score: 169 bits (427), Expect = 5.710e-46
Identity = 82/144 (56.94%), Postives = 108/144 (75.00%), Query Frame = 1
Query:  571 LAFYLRNMAKVDLLKPHEEVILGRQIQKGVKYENTRDHLQLMRGKEPTEEEWALALGIDEEELSKELGRARKAKMAMLAANLRLVVSIAKRYRWRGLTFPDLIQEGTFGLVKASEKFDPERGFKFSTYATWWIKQSILRGVADQ 1002
            L    + M  +DLLKP EE+ L RQI+ G+++E  R+ L +   + P+  EWA  +G+DE+ L   + R+ +AK  M++ANLRL VSIAKRYR RGL  PDLIQEG+FGL+KA+E+FDPE+GFKFSTYATWWIKQSI+R +ADQ
Sbjct:   17 LQHLFKRMTSIDLLKPEEEIALARQIKLGIEWEAAREELAMRLERTPSLGEWAAHMGVDEDTLKLIMIRSARAKSTMISANLRLAVSIAKRYRRRGLALPDLIQEGSFGLMKAAERFDPEKGFKFSTYATWWIKQSIMRAIADQ 160          
BLAST of mRNA_H-elongata_contig102036.185.1 vs. uniprot
Match: A0A6H5KA31_9PHAE (RNA_pol_sigma70 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KA31_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 7.070e-44
Identity = 86/148 (58.11%), Postives = 111/148 (75.00%), Query Frame = 1
Query:  559 NSEPLAFYLRNMAKVDLLKPHEEVILGRQIQKGVKYENTRDHLQLMRGKEPTEEEWALALGIDEEELSKELGRARKAKMAMLAANLRLVVSIAKRYRWRGLTFPDLIQEGTFGLVKASEKFDPERGFKFSTYATWWIKQSILRGVADQ 1002
            ++ PL  Y + + K+ LLKP EEV+LGRQIQ+G++ E  RD L+   G  P+ EEWA  L + ++EL +EL  A +AK  M++ANLRLVVS+A+ YR RGL FPDLIQEGT GLVKA EKF+PE GF+F TYA WWIK+SIL G+A+Q
Sbjct:  236 DANPLNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYAQWWIKKSILTGIANQ 383          
BLAST of mRNA_H-elongata_contig102036.185.1 vs. uniprot
Match: A0A7S2KJI8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KJI8_9STRA)

HSP 1 Score: 160 bits (405), Expect = 4.610e-42
Identity = 80/146 (54.79%), Postives = 107/146 (73.29%), Query Frame = 1
Query:  565 EPLAFYLRNMAKVDLLKPHEEVILGRQIQKGVKYENTRDHLQLMRGKEPTEEEWALALGIDEEELSKELGRARKAKMAMLAANLRLVVSIAKRYRWRGLTFPDLIQEGTFGLVKASEKFDPERGFKFSTYATWWIKQSILRGVADQ 1002
            E ++ YL+ M   DLL+  EEVIL R IQ  +K+E  R+ L+    + PT  EWA+A+ +D   L +++ R+++AK A++ +NLRLVVSIAKRY  RG+ F DL QEGT GL +A+EKFDPERGF+FSTYATWWIKQ I+R +ADQ
Sbjct:   88 ESISHYLKTMGNHDLLRREEEVILARHIQILIKWEEVREELESKLIRPPTYAEWAVAVNLDVPGLKRQIRRSQRAKAALIESNLRLVVSIAKRYVNRGMNFQDLCQEGTLGLTRATEKFDPERGFRFSTYATWWIKQGIMRAIADQ 233          
BLAST of mRNA_H-elongata_contig102036.185.1 vs. uniprot
Match: A0A7S2WX55_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WX55_9STRA)

HSP 1 Score: 162 bits (409), Expect = 5.340e-42
Identity = 79/148 (53.38%), Postives = 113/148 (76.35%), Query Frame = 1
Query:  559 NSEPLAFYLRNMAKVDLLKPHEEVILGRQIQKGVKYENTRDHLQLMRGKEPTEEEWALALGIDEEELSKELGRARKAKMAMLAANLRLVVSIAKRYRWRGLTFPDLIQEGTFGLVKASEKFDPERGFKFSTYATWWIKQSILRGVADQ 1002
            +S  L ++ +++ +  LL+  EEV+L R++Q  + +E+ RD L+   G+ PT EEWA ++G+  +EL ++L R + AK AM+++NLRLV+SIAKRY+ RGL   DLIQEG+ GLV+A EKFDPE+GFKFSTY+TWWIKQ+ILR +ADQ
Sbjct:  156 SSNELGWFFKSIGQHSLLRAEEEVLLARKVQAMIGWEDVRDGLKDQLGRPPTLEEWASSVGMQPDELRRKLLRGQSAKKAMISSNLRLVISIAKRYQKRGLALTDLIQEGSLGLVRAVEKFDPEKGFKFSTYSTWWIKQAILRAIADQ 303          
BLAST of mRNA_H-elongata_contig102036.185.1 vs. uniprot
Match: A0A7S2SH06_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SH06_9STRA)

HSP 1 Score: 157 bits (397), Expect = 8.460e-41
Identity = 79/149 (53.02%), Postives = 109/149 (73.15%), Query Frame = 1
Query:  562 SEPLAFYLRNMAKVDLLKPHEEVILGRQIQKGVKYENTRDHLQLMRGKEPTEEEWALAL--GIDEEELSKELGRARKAKMAMLAANLRLVVSIAKRYRWRGLTFPDLIQEGTFGLVKASEKFDPERGFKFSTYATWWIKQSILRGVADQ 1002
            ++ + +YL+ M   +LLK +EE+IL R+IQ  +K+E  R+ L+    + PT  EWA A+  G+   E+ K++ R+ +AK A+  +NLRLV+SIAK+Y+ RGLTF DL QEGT GL +A EKFDPERGF+FSTYATWWIKQ I+R +ADQ
Sbjct:  165 NDSMKYYLKTMGNHELLKKNEEIILAREIQILIKWETQREELESSLMRPPTYAEWAAAVQKGMTVPEMKKQIRRSLRAKTALTESNLRLVISIAKKYQNRGLTFQDLCQEGTLGLTRACEKFDPERGFRFSTYATWWIKQGIMRAIADQ 313          
BLAST of mRNA_H-elongata_contig102036.185.1 vs. uniprot
Match: A0A7S1B782_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B782_9STRA)

HSP 1 Score: 157 bits (397), Expect = 3.030e-40
Identity = 78/143 (54.55%), Postives = 107/143 (74.83%), Query Frame = 1
Query:  580 YLRNMAKVDLLKPHEEVILGRQIQKGVKYENTRDHLQLMRGKEPTEEEWALALGIDEEELSKELGRARKAKMAMLAANLRLVVSIAKRY--RWRGLTFPDLIQEGTFGLVKASEKFDPERGFKFSTYATWWIKQSILRGVADQ 1002
            YL++M   DLL   EEV+L R +Q  +K+E  R+ L++   + PT  EWA A+G+D ++L +++ R+++AK AM+ +NLRLV+SIAKRY  R   L+  DL QEG+ GLVKA EKFDPERGF+FSTYATWWIKQS++R +ADQ
Sbjct:  177 YLKSMGNHDLLTAQEEVLLARHVQLLLKWEEVRERLEIELARPPTYAEWAAAVGVDTKKLKRQIRRSQRAKAAMIESNLRLVISIAKRYTSRTNTLSVQDLCQEGSLGLVKAVEKFDPERGFRFSTYATWWIKQSVMRAIADQ 319          
BLAST of mRNA_H-elongata_contig102036.185.1 vs. uniprot
Match: B8C130_THAPS (RNA polymerase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C130_THAPS)

HSP 1 Score: 153 bits (386), Expect = 3.240e-40
Identity = 76/148 (51.35%), Postives = 107/148 (72.30%), Query Frame = 1
Query:  565 EPLAFYLRNMAKVDLLKPHEEVILGRQIQKGVKYENTRDHLQLMRGKEPTEEEWALAL--GIDEEELSKELGRARKAKMAMLAANLRLVVSIAKRYRWRGLTFPDLIQEGTFGLVKASEKFDPERGFKFSTYATWWIKQSILRGVADQ 1002
            + + +Y++ M   DLL+ +EE+IL R+IQ  +K+E  R+ L+    + PT +EWA A+  G+   ++ K++ R+ +AK A+  +NLRLV+SIAKRY+ RGL   DL QEGT GL +A EKFDPERGF+FSTYATWWIKQ I+R +ADQ
Sbjct:    1 DSMKYYMKTMGNHDLLQKNEEIILAREIQILIKWEEVREELEGQLLRPPTYQEWANAIEPGMTVTQIKKQIRRSLRAKAALTESNLRLVISIAKRYQGRGLNMQDLCQEGTLGLTRACEKFDPERGFRFSTYATWWIKQGIMRAIADQ 148          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig102036.185.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3H4_9PHAE9.630e-8754.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNI6_ECTSI1.190e-7283.56Chloroplast RNA-polymerase sigma factor n=1 Tax=Ec... [more]
A0A835ZES3_9STRA2.500e-4656.25RNA polymerase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A835ZBY3_9STRA5.710e-4656.94RNA polymerase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A6H5KA31_9PHAE7.070e-4458.11RNA_pol_sigma70 domain-containing protein n=2 Tax=... [more]
A0A7S2KJI8_9STRA4.610e-4254.79Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2WX55_9STRA5.340e-4253.38Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2SH06_9STRA8.460e-4153.02Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S1B782_9STRA3.030e-4054.55Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
B8C130_THAPS3.240e-4051.35RNA polymerase (Fragment) n=1 Tax=Thalassiosira ps... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig102036contigH-elongata_contig102036:320..1817 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score251.5
Seed ortholog evalue5.6e-64
Seed eggNOG ortholog2880.D8LNI6
EggNOG free text desc.sigma factor activity
EggNOG OGs2QVXR@2759,COG0568@1
Ec32 ortholog descriptionRNA polymerase sigma-70 region 3
Ec32 orthologEc-24_002980.1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons2
Model size1032
Cds size1032
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929560.2050147-CDS-H-elongata_contig102036:319..12571622929560.2050147-CDS-H-elongata_contig102036:319..1257Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig102036 320..1257 -
1691679070.3655877-CDS-H-elongata_contig102036:319..12571691679070.3655877-CDS-H-elongata_contig102036:319..1257Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig102036 320..1257 -
1622929560.221288-CDS-H-elongata_contig102036:1723..18171622929560.221288-CDS-H-elongata_contig102036:1723..1817Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig102036 1724..1817 -
1691679070.3758264-CDS-H-elongata_contig102036:1723..18171691679070.3758264-CDS-H-elongata_contig102036:1723..1817Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig102036 1724..1817 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig102036.185.1prot_H-elongata_contig102036.185.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig102036 320..1817 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig102036.185.1

>prot_H-elongata_contig102036.185.1 ID=prot_H-elongata_contig102036.185.1|Name=mRNA_H-elongata_contig102036.185.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=344bp
MVSSRRKLTVCVVGAVCSSASDGFITPPACLARSFGAGDPFYSVERRLGS
CGEEGRHQRRGEARRSATTPRPGARWWRSASTTGAPCRMKAAAGVQAASE
AALLENDPSHRKQGSPGMPFDMHDDSDFYREMEELRSRKDTRSSSNSLRL
LIDDLDEVDIAKMSRRGAKSKSGRGGGGGGGNSGSSNSEPLAFYLRNMAK
VDLLKPHEEVILGRQIQKGVKYENTRDHLQLMRGKEPTEEEWALALGIDE
EELSKELGRARKAKMAMLAANLRLVVSIAKRYRWRGLTFPDLIQEGTFGL
VKASEKFDPERGFKFSTYATWWIKQSILRGVADQVSCLPCAVK*
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mRNA from alignment at H-elongata_contig102036:320..1817-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig102036.185.1 ID=mRNA_H-elongata_contig102036.185.1|Name=mRNA_H-elongata_contig102036.185.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1498bp|location=Sequence derived from alignment at H-elongata_contig102036:320..1817- (Himanthalia elongata Himel1 dioecious)
ATGGTCTCCTCACGACGAAAACTGACGGTCTGTGTGGTGGGCGCAGTCTG TTCCTCAGCCTCTGACGGGTTCATCACACCGCCCGCATGTTTAGGTGACT ACCCTGGTACATAGCAGCCCCCTGCGCTTGAGAATGTTTGAACCCCACCG CAATACTGCGCCTCTCGTGTAGAGCTAGATGATTTGCCCATCTTCCCTCA GGCGTTGGTAAACAGTTACCCGAGAATCGATAGTGACGAGTTGGTTATTT CTTTCGTCGCACGTGTGTTGGGGATGTGGTTGCAGGTTGTCCCCGATCGA TCAACGTGTATCATACAAAAGACGTGCAACTCAGAAACCTACCGCATCGA TTTTGAAAATGAAATGAGTTTTCAACCTCTGACGCGTTTAGCTTGAGCTG GACATGCTCAAAATAATAAGTCGTTTTCCCTTAGAGTGAGCCCCAAGGCA GGTATATCGCTTTCACGATCAACCGTCTGGGCTTGTCGCTAATCCAACCC CCATCTATTTGCTCCTTTATGCCACCAATCACCCCCCCCTGTATCGCTCT CTTACACCAGCGAGGTCGTTCGGAGCAGGGGACCCTTTCTACTCCGTAGA GCGGCGATTAGGCTCATGTGGCGAGGAGGGTAGACATCAACGACGAGGGG AAGCGCGTAGATCAGCAACCACACCAAGGCCTGGCGCTAGATGGTGGAGG TCGGCCTCCACAACGGGCGCTCCTTGCCGGATGAAGGCCGCGGCAGGGGT GCAAGCGGCCTCCGAGGCGGCATTGCTCGAGAACGACCCTTCACACCGCA AGCAGGGCTCGCCGGGGATGCCCTTTGACATGCACGACGACAGTGATTTC TACCGGGAGATGGAGGAACTCCGCAGCAGAAAGGATACCCGCAGCTCGTC CAACTCTCTTAGGCTGCTGATCGACGACCTCGATGAGGTAGACATCGCGA AGATGAGCAGGAGAGGTGCAAAGAGCAAGTCGGGGCGAGGAGGGGGTGGT GGCGGTGGCAACAGCGGCAGCAGCAATAGCGAGCCCCTGGCCTTTTACCT CCGAAACATGGCAAAGGTGGACCTGCTCAAGCCTCACGAGGAGGTCATCC TAGGCAGGCAGATCCAGAAGGGAGTCAAGTACGAGAACACGCGAGATCAC CTGCAGCTAATGCGAGGGAAGGAACCCACGGAGGAAGAGTGGGCGCTGGC CCTCGGAATCGATGAGGAGGAGCTCTCGAAGGAGCTCGGGAGGGCGAGGA AGGCCAAGATGGCCATGCTGGCGGCGAACCTGAGGCTGGTGGTGAGCATC GCCAAGCGCTACCGGTGGCGAGGGCTGACTTTCCCGGACCTGATTCAGGA AGGCACGTTCGGTCTGGTGAAGGCGTCGGAAAAGTTCGACCCCGAGAGGG GCTTCAAGTTCTCCACGTACGCGACGTGGTGGATCAAGCAGAGCATCCTC CGAGGCGTCGCCGACCAGGTGAGCTGTCTACCCTGCGCCGTTAAATAG
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Coding sequence (CDS) from alignment at H-elongata_contig102036:320..1817-

>mRNA_H-elongata_contig102036.185.1 ID=mRNA_H-elongata_contig102036.185.1|Name=mRNA_H-elongata_contig102036.185.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2064bp|location=Sequence derived from alignment at H-elongata_contig102036:320..1817- (Himanthalia elongata Himel1 dioecious)
ATGGTCTCCTCACGACGAAAACTGACGGTCTGTGTGGTGGGCGCAGTCTG
TTCCTCAGCCTCTGACGGGTTCATCACACCGCCCGCATGTTTAGATGGTC
TCCTCACGACGAAAACTGACGGTCTGTGTGGTGGGCGCAGTCTGTTCCTC
AGCCTCTGACGGGTTCATCACACCGCCCGCATGTTTAGCGAGGTCGTTCG
GAGCAGGGGACCCTTTCTACTCCGTAGAGCGGCGATTAGGCTCATGTGGC
GAGGAGGGTAGACATCAACGACGAGGGGAAGCGCGTAGATCAGCAACCAC
ACCAAGGCCTGGCGCTAGATGGTGGAGGTCGGCCTCCACAACGGGCGCTC
CTTGCCGGATGAAGGCCGCGGCAGGGGTGCAAGCGGCCTCCGAGGCGGCA
TTGCTCGAGAACGACCCTTCACACCGCAAGCAGGGCTCGCCGGGGATGCC
CTTTGACATGCACGACGACAGTGATTTCTACCGGGAGATGGAGGAACTCC
GCAGCAGAAAGGATACCCGCAGCTCGTCCAACTCTCTTAGGCTGCTGATC
GACGACCTCGATGAGGTAGACATCGCGAAGATGAGCAGGAGAGGTGCAAA
GAGCAAGTCGGGGCGAGGAGGGGGTGGTGGCGGTGGCAACAGCGGCAGCA
GCAATAGCGAGCCCCTGGCCTTTTACCTCCGAAACATGGCAAAGGTGGAC
CTGCTCAAGCCTCACGAGGAGGTCATCCTAGGCAGGCAGATCCAGAAGGG
AGTCAAGTACGAGAACACGCGAGATCACCTGCAGCTAATGCGAGGGAAGG
AACCCACGGAGGAAGAGTGGGCGCTGGCCCTCGGAATCGATGAGGAGGAG
CTCTCGAAGGAGCTCGGGAGGGCGAGGAAGGCCAAGATGGCCATGCTGGC
GGCGAACCTGAGGCTGGTGGTGAGCATCGCCAAGCGCTACCGGTGGCGAG
GGCTGACTTTCCCGGACCTGATTCAGGAAGGCACGTTCGGTCTGGTGAAG
GCGTCGGAAAAGTTCGACCCCGAGAGGGGCTTCAAGTTCTCCACGTACGC
GACGTGGTGGATCAAGCAGAGCATCCTCCGAGGCGTCGCCGACCAGGTGA
GCTGTCTACCCTGCGCCGTTAAATAGCGAGGTCGTTCGGAGCAGGGGACC
CTTTCTACTCCGTAGAGCGGCGATTAGGCTCATGTGGCGAGGAGGGTAGA
CATCAACGACGAGGGGAAGCGCGTAGATCAGCAACCACACCAAGGCCTGG
CGCTAGATGGTGGAGGTCGGCCTCCACAACGGGCGCTCCTTGCCGGATGA
AGGCCGCGGCAGGGGTGCAAGCGGCCTCCGAGGCGGCATTGCTCGAGAAC
GACCCTTCACACCGCAAGCAGGGCTCGCCGGGGATGCCCTTTGACATGCA
CGACGACAGTGATTTCTACCGGGAGATGGAGGAACTCCGCAGCAGAAAGG
ATACCCGCAGCTCGTCCAACTCTCTTAGGCTGCTGATCGACGACCTCGAT
GAGGTAGACATCGCGAAGATGAGCAGGAGAGGTGCAAAGAGCAAGTCGGG
GCGAGGAGGGGGTGGTGGCGGTGGCAACAGCGGCAGCAGCAATAGCGAGC
CCCTGGCCTTTTACCTCCGAAACATGGCAAAGGTGGACCTGCTCAAGCCT
CACGAGGAGGTCATCCTAGGCAGGCAGATCCAGAAGGGAGTCAAGTACGA
GAACACGCGAGATCACCTGCAGCTAATGCGAGGGAAGGAACCCACGGAGG
AAGAGTGGGCGCTGGCCCTCGGAATCGATGAGGAGGAGCTCTCGAAGGAG
CTCGGGAGGGCGAGGAAGGCCAAGATGGCCATGCTGGCGGCGAACCTGAG
GCTGGTGGTGAGCATCGCCAAGCGCTACCGGTGGCGAGGGCTGACTTTCC
CGGACCTGATTCAGGAAGGCACGTTCGGTCTGGTGAAGGCGTCGGAAAAG
TTCGACCCCGAGAGGGGCTTCAAGTTCTCCACGTACGCGACGTGGTGGAT
CAAGCAGAGCATCCTCCGAGGCGTCGCCGACCAGGTGAGCTGTCTACCCT
GCGCCGTTAAATAG
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