mRNA_H-elongata_contig10184.158.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Match: A0A6H5L4E7_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4E7_9PHAE) HSP 1 Score: 173 bits (439), Expect = 4.980e-51 Identity = 80/99 (80.81%), Postives = 91/99 (91.92%), Query Frame = 1 Query: 1 MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFKLHLGDTTNTLTDDDYDALAERSDGCSGSDISVITREALMEPLRKCQAAK 297
MQGVGN HDG+LVL ATNVPWELDPAMRRRFEKR+YIPLPE EAR++MFKLHLGDT NTLTD +++ L ++++GCSGSDISVITREALMEPLRKCQ AK
Sbjct: 188 MQGVGNTHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEPEARSIMFKLHLGDTANTLTDQNFETLGDKAEGCSGSDISVITREALMEPLRKCQTAK 286
BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Match: A0A836CL36_9STRA (Katanin like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL36_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.310e-49 Identity = 83/99 (83.84%), Postives = 90/99 (90.91%), Query Frame = 1 Query: 1 MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFKLHLGDTTNTLTDDDYDALAERSDGCSGSDISVITREALMEPLRKCQAAK 297
MQGVGN HDGLLVL ATNVPWELDPAMRRRFEKR+YIPLPEA ARA MF++HLGDT+NTL+D +Y L E S+GCSGSDISVITREALMEPLRKCQAAK
Sbjct: 258 MQGVGNTHDGLLVLGATNVPWELDPAMRRRFEKRIYIPLPEAPARANMFQIHLGDTSNTLSDHNYSELGELSEGCSGSDISVITREALMEPLRKCQAAK 356
BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Match: A0A397EB65_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EB65_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.640e-46 Identity = 72/99 (72.73%), Postives = 85/99 (85.86%), Query Frame = 1 Query: 1 MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFKLHLGDTTNTLTDDDYDALAERSDGCSGSDISVITREALMEPLRKCQAAK 297
MQGVG+ HDG+LVL ATNVPWELDPAMRRRFEKR+YIPLPE AR VM K+HLGDT ++L D D+ LA +++GCSGSDISV+ REALMEPLR+CQ A+
Sbjct: 58 MQGVGHSHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEVHARKVMLKIHLGDTPHSLNDADFTTLAAKAEGCSGSDISVLVREALMEPLRQCQQAQ 156
BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Match: A0A418AYC1_9STRA (MIT domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AYC1_9STRA) HSP 1 Score: 160 bits (405), Expect = 3.940e-46 Identity = 74/99 (74.75%), Postives = 87/99 (87.88%), Query Frame = 1 Query: 1 MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFKLHLGDTTNTLTDDDYDALAERSDGCSGSDISVITREALMEPLRKCQAAK 297
MQGVG+ HDG+LVL ATNVPWELDPAMRRRFEKR+YIPLPE EAR VM K+HLGDT ++L DDD+ LA +++GCSGSDISV+ REALMEPLR+CQ A+
Sbjct: 247 MQGVGHSHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEVEARKVMLKIHLGDTPHSLNDDDFTTLATKAEGCSGSDISVLVREALMEPLRQCQQAQ 345
BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Match: W2RG29_PHYPN (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2RG29_PHYPN) HSP 1 Score: 160 bits (404), Expect = 6.210e-46 Identity = 73/99 (73.74%), Postives = 88/99 (88.89%), Query Frame = 1 Query: 1 MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFKLHLGDTTNTLTDDDYDALAERSDGCSGSDISVITREALMEPLRKCQAAK 297
MQG+GNKHDG+LVL ATNVPWELDPAMRRRFEKR+YIPLP+ EAR VM +HLGDT N L+D ++ A+AE+++GCSGSDISV+ R+ALMEPLRKCQ A+
Sbjct: 251 MQGIGNKHDGVLVLGATNVPWELDPAMRRRFEKRIYIPLPDIEARKVMLGIHLGDTPNELSDSNFTAIAEKTEGCSGSDISVLVRDALMEPLRKCQQAQ 349
BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Match: K3X3Z4_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X3Z4_GLOUD) HSP 1 Score: 161 bits (408), Expect = 1.070e-45 Identity = 74/99 (74.75%), Postives = 89/99 (89.90%), Query Frame = 1 Query: 1 MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFKLHLGDTTNTLTDDDYDALAERSDGCSGSDISVITREALMEPLRKCQAAK 297
MQGVGN HDG+LVL ATNVPWELDPAMRRRFEKR+YIPLP+A+AR VM +HLGDT + LTD+++ A+AE+++GCSGSDISV+ REALMEPLRKCQ A+
Sbjct: 253 MQGVGNTHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPDADARKVMLNIHLGDTPHALTDENFTAIAEQTEGCSGSDISVLVREALMEPLRKCQQAQ 351
BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Match: A0A024TRV6_9STRA (Uncharacterized protein n=12 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TRV6_9STRA) HSP 1 Score: 160 bits (405), Expect = 2.850e-45 Identity = 74/99 (74.75%), Postives = 87/99 (87.88%), Query Frame = 1 Query: 1 MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFKLHLGDTTNTLTDDDYDALAERSDGCSGSDISVITREALMEPLRKCQAAK 297
MQGVG+ HDG+LVL ATNVPWELDPAMRRRFEKR+YIPLPE EAR VM K+HLGDT ++L DDD+ LA +++GCSGSDISV+ REALMEPLR+CQ A+
Sbjct: 251 MQGVGHSHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEVEARKVMLKIHLGDTPHSLNDDDFTTLATKAEGCSGSDISVLVREALMEPLRQCQQAQ 349
BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Match: A0A418BY99_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418BY99_9STRA) HSP 1 Score: 155 bits (392), Expect = 2.980e-45 Identity = 72/99 (72.73%), Postives = 85/99 (85.86%), Query Frame = 1 Query: 1 MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFKLHLGDTTNTLTDDDYDALAERSDGCSGSDISVITREALMEPLRKCQAAK 297
MQGVG+ HDG+LVL ATNVPWELDPAMRRRFEKR+YIPLPE AR VM K+HLGDT ++L D D+ LA +++GCSGSDISV+ REALMEPLR+CQ A+
Sbjct: 58 MQGVGHSHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEVHARKVMLKIHLGDTPHSLNDADFTTLAAKAEGCSGSDISVLVREALMEPLRQCQQAQ 156
BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Match: A0A024GGM2_9STRA (Vesicle-fusing ATPase n=5 Tax=Albugo TaxID=65356 RepID=A0A024GGM2_9STRA) HSP 1 Score: 160 bits (404), Expect = 3.860e-45 Identity = 75/99 (75.76%), Postives = 85/99 (85.86%), Query Frame = 1 Query: 1 MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFKLHLGDTTNTLTDDDYDALAERSDGCSGSDISVITREALMEPLRKCQAAK 297
MQG+G HDG+LVL ATNVPWELDPA+RRRFEKR+YIPLPEA+AR M KLHLGDT + L DDDY LA ++DGCSGSDISV+ REALMEPLRKCQ A+
Sbjct: 249 MQGIGTSHDGVLVLGATNVPWELDPAIRRRFEKRIYIPLPEAKARKEMLKLHLGDTPHALVDDDYKQLATQTDGCSGSDISVLVREALMEPLRKCQQAR 347
BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Match: W2RI57_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2RI57_PHYPN) HSP 1 Score: 160 bits (404), Expect = 5.030e-45 Identity = 73/99 (73.74%), Postives = 88/99 (88.89%), Query Frame = 1 Query: 1 MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFKLHLGDTTNTLTDDDYDALAERSDGCSGSDISVITREALMEPLRKCQAAK 297
MQG+GNKHDG+LVL ATNVPWELDPAMRRRFEKR+YIPLP+ EAR VM +HLGDT N L+D ++ A+AE+++GCSGSDISV+ R+ALMEPLRKCQ A+
Sbjct: 251 MQGIGNKHDGVLVLGATNVPWELDPAMRRRFEKRIYIPLPDIEARKVMLGIHLGDTPNELSDSNFTAIAEKTEGCSGSDISVLVRDALMEPLRKCQQAQ 349 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10184.158.1 >prot_H-elongata_contig10184.158.1 ID=prot_H-elongata_contig10184.158.1|Name=mRNA_H-elongata_contig10184.158.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=99bp MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFKback to top mRNA from alignment at H-elongata_contig10184:6958..8264+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10184.158.1 ID=mRNA_H-elongata_contig10184.158.1|Name=mRNA_H-elongata_contig10184.158.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1307bp|location=Sequence derived from alignment at H-elongata_contig10184:6958..8264+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10184:6958..8264+ >mRNA_H-elongata_contig10184.158.1 ID=mRNA_H-elongata_contig10184.158.1|Name=mRNA_H-elongata_contig10184.158.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=594bp|location=Sequence derived from alignment at H-elongata_contig10184:6958..8264+ (Himanthalia elongata Himel1 dioecious)back to top |