mRNA_H-elongata_contig10149.130.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig10149.130.1 vs. uniprot
Match: D8LR51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR51_ECTSI) HSP 1 Score: 852 bits (2201), Expect = 7.050e-279 Identity = 666/1633 (40.78%), Postives = 789/1633 (48.32%), Query Frame = 1 Query: 1 QFSVAWPSRRS--TSQEGLGNESWFTS-RPVAASGDGDGGDDGSSYSRGHGVEGGHASPVSTGDGLAD-------------SGLDFLGTTESVRNLLHLPYTSEAVTVGLHRVGQTLVLDGNLGEVLGTAAAASNASRSTPPSPASRQRSSKGGDGGKTRVRGSAQSEHSTGNGNNTIGGGDEGSRWVMVGRGGKPQRGENEDEDAPXXXXXXXXXXXXXXXXXXGWSV-HQSSWPALGA------AAEALGKDDTAT----------SGTGILSIVPRRPRGNAFESRPPEPAGFWRAFQWELNGMRLMLGSSLQVCSTSEHPQVSVRLHDGDENLSLCTCLDYYLDNVMENVPELALCMREKGYIQGCRLVNTEDIPYLGSLSRKSHESTA-------------------PVPLFDPLVVELNATMLLRFLQENCSREGGTYLLHRSEGAAHVQLYDVSALSRQRNRRWKWLLAMLCYRFALRISHHIHQPLNGGGG-PASGADLRGRRSSSDAA---------------PVNVASSFPGPEAVRQLQRRQRQLLENSLELLEELEKLGGGGHETICASVQEHIADTYLRYGGVQFMLSEAGDGSDSAPGINHGDGRSKPHKLSGSKSATGTATATTVEHELTAKRAHSRTSWTVDQNGKVWTTPPPLRPTVANATTNASQQGTLCGGIKSAR---------GVEGFQPGVEGQ------PISVNSRLSHSSDGGTT----------ADLTNSRKENRCVEDNLDKAQDHLTRGIVILRGVMARQEAVAAGHDVFA-ADVVIVGEKGVPVGVMRQQLSPWLAVDED-DDEDKIDSVTHGSRGDAGFPGKDQPPRRRSRRGSQDESEDP-ATAMSVVSEQLFGLQQKLVGTYVAASRARLSKGFPSPSLATSSTPSSQTKSGTRRDVAIAGQEDLEDAPDEEMRAELVEGTIGALCAAWEHMVEATVTLDRRAAAKLM-------------------------NAEDETSTLQNRGHFDNHGQDTNISGYLQ--------RGAPGRQTDQAHDLGPLWKGSLSEALARSGNGDCDIDAAYGSRTLSGLVTTDTEKPSHASYSLSMSKLPGKEDAIRSLTWDYAARRQLENRRAELYELCGDVAHVCVTMRAAA-------------------DQSKSPYRKGLIKRLEELLSLANPPLELDDFDVCHDLHGRVLKALDSDSTASTATTGVKKGLRLQGEYSGYASTVDPRPLAETCVHRLAKAGHVPAEATVWSLHLAVEACYNRALRELGL-------------GSALQPPQIPSLGTYRRGRDSYHWDAAFASGSVIEACARLKKKLGDASNELGKLMAQCASALAQTPSPSMSVSTKRSSSIDPQGATSQ--------------------PPHPGLSCAVCVACAQRYFQRSLSEFQAIHDARNIALVLCNLASMARMKYHAFARLSEARSE-AGSDAAPMADTAAAG----------------------GRGRGSTRNRRKGPTREKGAAKAVELCSSAHAALGSRDADARTWDHVSNELAMAYLCLGVERRQQLLATLLRPDAAAVRVPEQARISSSPRRASEASSFLSPPSLAQVKSVVEPLERAL 4287 QFSV P RRS + + ++SWF S RP ++ D G DG+ S +GG G GLDFLGTTESVR L HLP+TSEAV+VGLHRVGQTLVLDGNL + E E+E WSV Q +WPALGA AA + G+D G GILS+VP RPR +F RPPEP GFWR+F+WEL GM L+LGSSL VCST+EHPQVSVRLHDGDE+LSLCTCLDYYLDNVMENVPELALCMREKGYIQGCR+V+TEDIPYL S+SRK+ +TA PVP+FDP VVELNATMLLRFLQENCSREGGTYLLHRSEGAAHVQLYDVSALSRQR+RRWKWLLAMLCYRFALRISHH + G GG PA+G G R+ +D P++V+ S GPE VRQLQRRQRQLLENSL+LLEEL +LGGGGHETICASVQEHIADTYL G G+ S+ G S+ G TA+T + + WT D G+VWT+PPPLR A A + + +R G EG+ P SV R+ DG AD+ + + R E+NLD+AQDHLT GI IL GVMARQE+ AAG D A ADVVIVGE+ PV +MRQQ +PW+AVD++ DD D S D G PG + G Q D PD+E RAELV G + +LCAAWE++ EA VTLDRR++A ++ E G + G R RQ D+A +LGPLWKGSLSEALAR D AA G D + L W AARRQLE RRAEL+ELCGDVAH CV++RA A + ++GL RL+ELLS A+PPL L D +VC LHGRV + L ++ G+ DPRPLAETC+H LA+ G P + T WSL LA EACY+RAL LGL G + ++ G +A+F SG V EA AR++KKLGDASNELGKLMAQCA L Q P P HPGL CAVCVA A +F+RSL++F+AI DARN+AL+LCNLAS+ R+K A ARL +A AG+ A+G G+G GS R GAA AVELC AH+ALG RD D RTWDH S ELAMAYLCLGVERRQ+LL LL+ A + S R ++ A S P+ AQ + VV PLE+AL Sbjct: 16 QFSVTSPVRRSDRSPDRAVRHQSWFRSGRPHTSALDPGGKADGACGSD----DGGEGKGEGRGXXXXXXXXXXXXXXXXGRGGLDFLGTTESVRELFHLPFTSEAVSVGLHRVGQTLVLDGNLDQ--------------------------------------------------------------------------EEEEE----------------------WSVTDQGNWPALGAPDAAATAASSSGEDAALVVPGDPGSGRGGGGGILSLVPSRPRAQSFGVRPPEPVGFWRSFEWELAGMHLVLGSSLPVCSTAEHPQVSVRLHDGDEDLSLCTCLDYYLDNVMENVPELALCMREKGYIQGCRVVSTEDIPYLSSMSRKTAAATATEGGPQNVGAXXXXXXXXXPVPMFDPDVVELNATMLLRFLQENCSREGGTYLLHRSEGAAHVQLYDVSALSRQRHRRWKWLLAMLCYRFALRISHHTRRQFWGRGGRPAAGRGSAGGRTGNDPGTSSSSXSSSDFEARGPLDVSPSA-GPEVVRQLQRRQRQLLENSLQLLEELAELGGGGHETICASVQEHIADTYLGTHGALPRPGSTSTGTSSSRG----------------HSSAGGGTASTQKAGV----------WTADSGGEVWTSPPPLRAQGAVAGSGGGKXXXXXXXXXKSRHRSDGSRKNGXXXXXXXAEGKAGGGSHPGSV--RIGGGGDGDGRDEVLGEERGRADMDETGERER--EENLDRAQDHLTSGIAILHGVMARQESAAAGRDDSATADVVIVGERKRPVAIMRQQRNPWVAVDDEGDDTDYSSSCEVEPAEDEGPPGMQDV----GQGGRQXXXXXXLGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGPDDETRAELVRGALDSLCAAWENLAEAKVTLDRRSSAAVVAXXXXXXXXXXXXXXXXXXXXXXXXXXEAWAXXXXXXGDGPSEGXXXXXXXXXXXXXXXXXXRRWRRRQDDRAEELGPLWKGSLSEALARDSR-DAAAAAADG-------------------------------DVMGRLAWTRAARRQLEARRAELFELCGDVAHACVSLRAKAVXXXXXXXXXXXXXGPSTGEGGSKEAQRGLSARLQELLSSASPPLVLGDLNVCGGLHGRVWETLTAEG----------------GD--------DPRPLAETCIHSLAREGRAPGDPTAWSLCLAAEACYDRAL--LGLDKVVAGVLDYRHPGGGIGATTAGAVTAGGGGGKVNAGNASFVSG-VPEARARIRKKLGDASNELGKLMAQCAGVLVQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPVHPGLGCAVCVASADAWFRRSLAQFRAIGDARNVALLLCNLASVERLKPRALARLGDACPRPAGTTGRLTVPGGASGSXXXXXXXXXXXXXKSGDRPIAGKGGGSGHLR--------GAAAAVELCGEAHSALGRRDEDERTWDHASAELAMAYLCLGVERRQELLGALLQAGEAT-----EGERRPSARPSATAPPGPSVPTAAQARGVVRPLEQAL 1441
BLAST of mRNA_H-elongata_contig10149.130.1 vs. uniprot
Match: A0A6H5KNI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI1_9PHAE) HSP 1 Score: 786 bits (2029), Expect = 3.240e-251 Identity = 658/1717 (38.32%), Postives = 780/1717 (45.43%), Query Frame = 1 Query: 199 GLDFLGTTESVRNLLHLPYTSEAVTVGLHRVGQTLVLDGNLGEVLGTAAAASNASRSTPP---SPASRQRSSKGGDGGKTRVRGSAQSEHSTGNGNNTIGGGDEGSRWVMVGRGGKPQRGENE--------------------DEDAPXXXXXXXXXXXXXXXXXXG----------------------------------------------------------------------WSV-HQSSWPALGAAAEALGKDDTATSGTG----------------ILSIVPRRPRGNAFESRPPEPAGFWRAFQWELNGMRLMLGSSLQVCSTSEHPQVSVRLHDGDENLSLCTCLDYYLDNVMENVPELALCMREKGYIQGCRLVNTEDIPYLGSLSRKSHESTA-------------------PVPLFDPLVVELNATMLLRFLQENCSREGGTYLLHRSEGAAHVQLYDVSALSRQRNRRWKWLLAMLCYRFALRISHHIHQPLNGGGGPASGADLRGRRSSSD---AAPVNVASSFPGPEAVRQLQRRQRQLLENSLELLEELEKLGGGGHETICASVQEHIADTYLRYGGVQFMLSEAGDGSDSAPGINHGDGRSKPHKLSGSKSATGTATATTVEHELTAKRAHSRTSWTVDQNGKVWTTPPPLRPTVANA----------------------TTNASQQGTLCGGIKSARGVEGFQPGVEGQPISVNSRLSHSSDGGTTADLTNSRKEN--------RCVEDNLDKAQDHLTRGIVILRGVMARQEAVAAGHDVFA-ADVVIVGEKGVPVGVMRQQLSPWLAVDEDDDEDKIDSVTHGSRGDAGFPGKD------QPPRRR-----------SRRGSQDESEDPATAMSVVSEQLFGLQQKLVGTYVAASRARLSKGFPSPSL--ATSSTPSSQTKSGTRRDVAIAGQEDLE----------------------------------------------------------DAPDEEMRAELVEGTIGALCAAWEHMVEATVTLDRRAAAKLMNAEDETSTLQNRGHFDNHGQDTN--------------------------ISGYLQRGAPGRQTDQAHDLGPLWKGSLSEALARSGNGDCDIDAAYGSRTLSGLVTTDTEKPSHASYSLSMSKLPGKEDAIRSLTWDYAARRQLENRRAELYELCGDVAHVCVTMRA---------AADQSKSPY------------RKGLIKRLEELLSLANPPLELDDFDVCHDLHGRVLKALDSDSTASTATTGVKKGLRLQGEYSGYASTVDPRPLAETCVHRLAKAGHVPAEATVWSLHLAVEACYNRALREL---------------GLGS--ALQPPQIPSLGTYRRGRDSYHWDAAFASGSVIEACARLKKKLGDASNELGKLMAQCASALAQTPSPSMSVSTKRSSSIDPQGATSQ--------------------------PPHPGLSCAVCVACAQRYFQRSLSEFQAIHDARNIALVLCNLASMARMKYHAFARLSEARSEAGSDAAPMADTAAAGGR---------------------GRGSTRNRRKGPTREKGAAKAVELCSSAHAALGSRDADARTWDHVSNELAMAYLCLGVERRQQLLATLLRPDAAAVRVPEQAR---ISSSPRRASEASSFLSPPSLAQVKSVVEPLERAL 4287 GLDFLGTTESVR L HLP+TSEAV+VGLHRVGQTL+LDGNL +VL AA +P S RWVMVGRGGKP++ E + D AP WSV Q +WPALGA A ILS+VP RPR +F RPPEP GFWR+F+WEL GM L+LGSSL VCST+EHPQVSVRLHDGDE+LSLCTCLDYYLDNVMENVPELALCMREKGYIQGCR+V+TEDIPYL S+SRK +TA PVP+FDP VVELNATMLLRFLQENCSREGGTYLLHRSEGAAHVQ +A S + GGG +G D SSSD P++V+ S GPE VR LQRRQRQLLENSLELLEEL +LGGGGHETICASVQEHIADTYL G L G S G TA+T + + WT D G+VWT+PPPLR A A + + ++ + G EG + G P SV R+ DG ++ + + R E+NLD+AQDHLT GI IL GVMARQE+ AAG D A ADVVIVGE+ PV +MRQQ +PW+ V ++ PG + R+R RRGS DES DPATA+SVVSEQL+GLQQKLVGTYVA +RARL + FP P L A S P+ D PD+E RAELV+G + +LCAAWE++ EA VTLDRR++A ++ D + QN D HG D + D+A LGPLWKGSLSEALAR DAA D D + L W AARRQLE RRAEL+ELCGDVAH CV++RA AA ++ P ++GL RL+ELLS A+PPL L D +VC LHGRV +AL ++ G+ DPRPLAETC+H LA+ G P + T WSL LA EACY+RAL L G+G+ A + + G G A+F SG V EA AR++KKLGDASNELGKLMAQCA L Q P P P HPGL CAVCVA A +F+RSL++F+AI DARN+AL+LCN+AS+ R+K A ARL +A +A A G G+G G +GAA AVELC AH+ALG RD D RTWDH S ELAMAYLCLGVERR +LL LL A + R ++SP +S P+ AQ + VV PLE+AL Sbjct: 67 GLDFLGTTESVRELFHLPFTSEAVSVGLHRVGQTLILDGNLDQVLAPAAXXXXXXXXXXXXDKAPVSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRWVMVGRGGKPRQPEGDGGEQGWRRYDHEEGGGHSAGDSTAPSGAPEGERRVNRAGAAVRRGQRSSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESSTTARGQEEEEWSVTDQGNWPALGAPDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXILSLVPSRPRAQSFGVRPPEPVGFWRSFEWELAGMHLVLGSSLPVCSTAEHPQVSVRLHDGDEDLSLCTCLDYYLDNVMENVPELALCMREKGYIQGCRVVSTEDIPYLSSMSRKPTAATATEGGPQNVGAXXXXXXXXTPVPMFDPDVVELNATMLLRFLQENCSREGGTYLLHRSEGAAHVQ----AAAS----------------------------TVEGGG--RTGNDPGTSSSSSDFEARGPLDVSPSA-GPEVVRLLQRRQRQLLENSLELLEELAELGGGGHETICASVQEHIADTYL---GTHGALPRPGCTSXXXXXX---------XXXXXXXXXXGGGTASTQKAGV----------WTADSGGEVWTSPPPLRAPGAVAGGSGXXXXXXXXXXXXXXXQRRSRHEGHGSRKNRAVRKSGGAEG-KAGGGAHPGSV--RIGGGGDGDGRDEVLDEERGRADMDETGERAREENLDRAQDHLTSGIAILHGVMARQESAAAGRDDSATADVVIVGERKRPVAIMRQQRNPWVTVADEXXXXXXXXXXXXXXXXXXXPGMQDGGQGSRQQRQRLGQXXXXXXXXRRRGSLDESGDPATALSVVSEQLWGLQQKLVGTYVAVARARLRRAFPDPPLVAAGSDGPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGPDDETRAELVQGALDSLCAAWENLAEAKVTLDRRSSAAVVAVGDGDNDSQN-DQEDRHGDDYDEGQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRAEQLGPLWKGSLSEALARDSR-----DAA---------AVADG-------------------DVMGRLAWTRAARRQLEARRAELFELCGDVAHACVSLRAKAVGVGIATAAAAAEGPAGPTTGEGGSTEAQRGLSARLQELLSSASPPLALGDLNVCGGLHGRVWEALSAED----------------GD--------DPRPLAETCIHSLARVGRAPGDPTAWSLCLAAEACYDRALLGLDKVVAGVLDNRHPDGGIGATTAGAVTAVAAGGKVNAGH------ASFVSG-VPEARARIRKKLGDASNELGKLMAQCAGVLVQAPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPVHPGLGCAVCVASADAWFRRSLAQFRAIGDARNVALLLCNIASVERLKPRALARLGDACPRPAGTTGRLAVPGGASGSXXXXXXXXXXXXXKSXGRPVAGKGG------GSGHLQGAAAAVELCGEAHSALGRRDEDERTWDHASAELAMAYLCLGVERRHELLGALLPAGEATEGAADTERRPLATASPGPSSV-------PTAAQARGVVGPLEQAL 1645
BLAST of mRNA_H-elongata_contig10149.130.1 vs. uniprot
Match: A0A835YNX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNX7_9STRA) HSP 1 Score: 317 bits (812), Expect = 1.780e-84 Identity = 210/489 (42.94%), Postives = 263/489 (53.78%), Query Frame = 1 Query: 205 DFLGTTESVRNLLHLPYTSEAVTVGLHRVGQTLVLDGNLGEVLGTAAAASNASRSTPPSPASRQRSSKGGDGGKTRVRGSAQSEHSTGNGNNTIGGGDEGSRWVMVGRGGKPQRGENEDEDAPXXXXXXXXXXXXXXXXXXGWSVHQSSWPALGAAAEALGKDDTATSGTGILSIVPRRPRGNAFESRPPEPAG-----------------FWRAFQWELNGMRLMLGSSLQVCSTSEHPQVSVRLHDGDENLSLCTCLDYYLDNVMENVPELALCMREKGYIQGCRLVNTEDIPYLGSLSRKSHESTAPVP--------LFDPLVVELNATMLLRFLQENCSREGGTYLLHRSEGAAHVQLYDVSALSRQRNRRWKWLLAMLCYRFALRISHHI------HQPLNGGGGPASGADLRGRRSSSDAAPVNVASSFPGPEAVRQLQRRQRQLLENSLELLEELEKLGGGGHETICASVQEHIADTYLRYG 1578 DFLG+T S+R+L LPYT EAVTVGLHRVG+TLV+DG + + L A A ++A + P+ GGD K+ R + R E+ DA + AAAE G G +S++P ++PP P G F R F W L+ M+L+LGS V TSEHP+VSV+LHD E L+LCTCLDYYLDNVMEN+PELALC+R KGYIQGCRL+ T DIP + LFDP VVELNAT+LLRFLQ+NCSREGGTYLL R+ G VQLYD+ ALS +R +RW+WLLAM+CYRFALRISHH+ L+GGGG GA +G +++ P + QLQRR+R+LL NSL+LL EL ++GGG HETI A+VQE IA+TY+ G Sbjct: 117 DFLGSTASLRDLFKLPYTPEAVTVGLHRVGRTLVVDGGVEDALSGAHARADAEHAELHLPS--DEGPAGGDSPKSTDRAAXXXXXXXXXXXXXX--------XXXXXXXXXDLRPACEERDA------------------------------VAAAAECAGG--------GAVSVLPPLAWSTRTFAQPPHPQGWQXXXXXXXXXXXXXSAFARQFHWNLHEMKLLLGSDQLVAGTSEHPRVSVKLHDDGEELTLCTCLDYYLDNVMENIPELALCLRSKGYIQGCRLIRTHDIPRINGGXXXXXXXXXXXXXXXXTGDGLFDPRVVELNATLLLRFLQQNCSREGGTYLLRRAAGGGAVQLYDLQALSGERQKRWRWLLAMMCYRFALRISHHLAGVADSSMGLDGGGG--GGAWAKGTQTA------------PEGDLREQLQRRRRRLLHNSLQLLSELAEMGGGRHETIAAAVQEQIAETYMADG 543
BLAST of mRNA_H-elongata_contig10149.130.1 vs. uniprot
Match: G4Z8V3_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z8V3_PHYSP) HSP 1 Score: 233 bits (595), Expect = 3.650e-59 Identity = 171/496 (34.48%), Postives = 245/496 (49.40%), Query Frame = 1 Query: 202 LDFLGTTESVRNLLHLPYTSEAVTVGLHRVGQTLVLDGNLGEVLGTAAAASNASRSTPPSPASRQRSSKGGDGGKTRVRGSAQSEHSTGNG------NNTIGGGDEGSRWVMVGRGGKPQRGENEDEDAPXXXXXXXXXXXXXXXXXXGWSVHQSSWPALGAAAEALGKDDTATSGTGILSIVPRRP-------RGNAFES---RPPEPAG----FWRAFQWELNGMRLMLGSSLQVCSTSEHPQVSVRLHDGDENLSLCTCLDYYLDNVMENVPELALCMREKGYIQGCRLVNTEDIPYLGSLSRKSHESTAPVPLFDPLVVELNATMLLRFLQENCSREGGTYLLHRSEGAAHVQLYDVSALSRQRNRRWKWLLAMLCYRFALRISHHIHQPLNGGGGPASGADLRGRRSSSDAAPVNVASSFPG--PEAVRQLQRRQRQLLENSLELLEELEKLGGGGHETICASVQEHIADTYLRYGGVQFMLSEAGDGSDS 1623 +DFLG E+++ L LPY+ V++ +HRVG TLV+DG L E ++ P + ++ + R+ ST N + +G E V+ R ++G+N XXXX + + +G +G D T+ + S ++P N F S PP G F R +W+ N ++++LGS + + S EHP VS++LHD D+ LSLCT LDYYLDNV+ N+PELA+CM KG ++G +LV T IPY+ R PLFD V +NA+MLL+FLQENCSR GTY LHR EG + ++LYDV LS+ +WK+++AMLCYRFA R S +A+S P +QLQ+RQR+LL + LL E+ + GG H +IC+SV E +ADTYLR QF +++G G + Sbjct: 42 VDFLGPAENIKRLFKLPYSQSRVSLAVHRVGSTLVVDGELDE--------NDLPAGFEDMPQDTLQLAQQSEETTQRLLYEKFIYESTVNSQLPPSESEAVG---EKEEEVVERRTEAKKQGKNAXXXXXXXXXKAAAKKAGDKMELLPAAERKEVREDVGVPPSIVGLDSTSDHSSDTSSSSQQKPAPSFVPTETNWFTSTAQHPPAYGGDSQTFQRILKWKFNDLKMILGSQVLLFSNQEHPAVSLKLHDMDKELSLCTVLDYYLDNVIANIPELAICMHSKGLVRGYKLVETRQIPYMSGTGR---------PLFDVQDVSMNASMLLKFLQENCSRPNGTYWLHRKEGESSLRLYDVDVLSQGNQLKWKYMMAMLCYRFAARASR-------------------------------LANSLAAGTPHLQQQLQQRQRELLRTCMNLLGEIAQKGGTAHSSICSSVSEQLADTYLRECN-QFHSTDSGSGDSN 485
BLAST of mRNA_H-elongata_contig10149.130.1 vs. uniprot
Match: D0NF44_PHYIT (Uncharacterized protein n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NF44_PHYIT) HSP 1 Score: 232 bits (591), Expect = 9.910e-59 Identity = 126/282 (44.68%), Postives = 166/282 (58.87%), Query Frame = 1 Query: 751 NAFESRPPEPA------GFWRAFQWELNGMRLMLGSSLQVCSTSEHPQVSVRLHDGDENLSLCTCLDYYLDNVMENVPELALCMREKGYIQGCRLVNTEDIPYLGSLSRKSHESTAPVPLFDPLVVELNATMLLRFLQENCSREGGTYLLHRSEGAAHVQLYDVSALSRQRNRRWKWLLAMLCYRFALRISHHIHQPLNGGGGPASGADLRGRRSSSDAAPVNVASSFPG--PEAVRQLQRRQRQLLENSLELLEELEKLGGGGHETICASVQEHIADTYLR 1572 N F S PP PA F R +W+ N ++++LGS + + S EHP VS++LHD DE LSLCT LDYYLDNV+ N+PELA+CM KG ++G +LV T IPY+ R LFD V +NA+MLL+FLQENCSR GTY LHR EG + ++LYDV LS+ +WK+++AMLCYRFA R S +A+S P+ +QLQ+RQR+LL + LL E+ + GG H +IC+SV E +ADTYLR Sbjct: 222 NWFTSAPPSPAFGGDSQTFQRILKWKFNDLKMILGSQVLLFSNQEHPAVSLKLHDMDEELSLCTVLDYYLDNVIANIPELAICMHSKGLVRGYKLVETRQIPYMSGTGRA---------LFDVQDVSMNASMLLKFLQENCSRPNGTYWLHRKEGESSLRLYDVDVLSQGSQLKWKYMMAMLCYRFAARASR-------------------------------LANSLAAGTPQLQQQLQQRQRELLRTCMSLLGEIAQRGGAAHSSICSSVSEQLADTYLR 463
BLAST of mRNA_H-elongata_contig10149.130.1 vs. uniprot
Match: A0A2D4CGL4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGL4_PYTIN) HSP 1 Score: 231 bits (588), Expect = 7.470e-58 Identity = 161/473 (34.04%), Postives = 229/473 (48.41%), Query Frame = 1 Query: 193 DSGLDFLGTTESVRNLLHLPYTSEAVTVGLHRVGQTLVLDGNLGEVLGTAAAASNASRSTPPSPASRQRSSKGGDGGKTRVRGSAQSEHSTGNGNNTIGGGDEGSRWVMVGRGGKPQRGENED-----------EDAPXXXXXXXXXXXXXXXXXXGWSVHQSSWPALGAAAE--ALGKDDTATSGTGILSIVPRRPRGNAFESRPPEPAGFWRAFQWELNGMRLMLGSSLQVCSTSEHPQVSVRLHDGDENLSLCTCLDYYLDNVMENVPELALCMREKGYIQGCRLVNTEDIPYLGSLSRKSHESTAPVPLFDPLVVELNATMLLRFLQENCSREGGTYLLHRSEGAAHVQLYDVSALSRQRNRRWKWLLAMLCYRFALRISHHIHQPLNGGGGPASGADLRGRRSSSDAAPVNVASSFPGPEAVRQLQRRQRQLLENSLELLEELEKLGGGGHETICASVQEHIADTYLR 1572 D G+DFLG E+++ L LPY+ V++ +HRVG TLV+DG + E P + S+K D K +S+ E + G P NE + G SV +S + GA + G+ T S P R + S E F R +W+ + ++++LGS + + S +EHP VS+RLHD D+ LSLCT LDYYLDNV+ N+PELA+CM KG+++G +LV+T IPY+ S+ PLFD V +NA+MLL+FL+ENC+R GTY LHR EG ++LYDV+ LS+ + +WK+++AMLCYRFA R S ++ + + P RQLQ RQR LL + LL+E+ GG H +IC+SV E +AD+YLR Sbjct: 208 DEGVDFLGPAENIKKLFKLPYSQSRVSLAVHRVGGTLVVDGEINEN---------------DMPIGFEDSAKESDPKKLEQAAEEKSQQLL----------YEKFIFQSAVAGSLPNAEMNESALPVDDRERQVQPRSTPSTKHKSRKSAKKNKKLG-SVPTASAFSTGAPGQQNVPGETTWGAKKTTESSHEPDR----TYTSPSVELPAFQRVLKWKFHDLKMILGSEVLLFSNAEHPAVSLRLHDVDKELSLCTVLDYYLDNVIANIPELAICMHSKGFVRGYKLVDTRQIPYISGNSQ---------PLFDIHEVSMNASMLLKFLKENCTRANGTYWLHRKEGETSLRLYDVNVLSQGKQLKWKYMMAMLCYRFATRASRMMY-----------------------------SLTAETPSLQRQLQHRQRDLLRTCMTLLKEIAAAGGSSHNSICSSVSEQLADSYLR 612
BLAST of mRNA_H-elongata_contig10149.130.1 vs. uniprot
Match: W2M2K1_PHYPR (Uncharacterized protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2M2K1_PHYPR) HSP 1 Score: 227 bits (578), Expect = 1.430e-57 Identity = 119/264 (45.08%), Postives = 160/264 (60.61%), Query Frame = 1 Query: 787 FWRAFQWELNGMRLMLGSSLQVCSTSEHPQVSVRLHDGDENLSLCTCLDYYLDNVMENVPELALCMREKGYIQGCRLVNTEDIPYLGSLSRKSHESTAPVPLFDPLVVELNATMLLRFLQENCSREGGTYLLHRSEGAAHVQLYDVSALSRQRNRRWKWLLAMLCYRFALRISHHIHQPLNGGGGPASGADLRGRRSSSDAAPVNVASSFPG--PEAVRQLQRRQRQLLENSLELLEELEKLGGGGHETICASVQEHIADTYLR 1572 F R +W+ N ++++LGS + + S EHP VS++LHD D+ LSLCT LDYYLDNV+ N+PELA+CM KG ++G +LV T IPY+ R PLFD V +NA+MLL+FLQENCSR GTY LHR EG + ++LYDV LS+ +WK+++AMLCYRFA R S +A+S P+ +QLQ+RQR+LL + LL E+ + GG H +IC+SV E +ADTYLR Sbjct: 398 FQRILKWKFNDLKMILGSQVLLFSNQEHPAVSLKLHDVDQELSLCTVLDYYLDNVIANIPELAICMHSKGLVRGYKLVETRQIPYMSGTGR---------PLFDVQDVSMNASMLLKFLQENCSRPNGTYWLHRKEGESSLRLYDVDVLSQGGQLKWKYMMAMLCYRFAARASR-------------------------------LANSLAAGTPQLQQQLQQRQRELLRTCMSLLGEIAQKGGAAHSSICSSVSEQLADTYLR 621
BLAST of mRNA_H-elongata_contig10149.130.1 vs. uniprot
Match: W2XV48_PHYPR (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora parasitica CJ01A1 TaxID=1317063 RepID=W2XV48_PHYPR) HSP 1 Score: 226 bits (576), Expect = 3.170e-57 Identity = 119/264 (45.08%), Postives = 160/264 (60.61%), Query Frame = 1 Query: 787 FWRAFQWELNGMRLMLGSSLQVCSTSEHPQVSVRLHDGDENLSLCTCLDYYLDNVMENVPELALCMREKGYIQGCRLVNTEDIPYLGSLSRKSHESTAPVPLFDPLVVELNATMLLRFLQENCSREGGTYLLHRSEGAAHVQLYDVSALSRQRNRRWKWLLAMLCYRFALRISHHIHQPLNGGGGPASGADLRGRRSSSDAAPVNVASSFPG--PEAVRQLQRRQRQLLENSLELLEELEKLGGGGHETICASVQEHIADTYLR 1572 F R +W+ N ++++LGS + + S EHP VS++LHD D+ LSLCT LDYYLDNV+ N+PELA+CM KG ++G +LV T IPY+ R PLFD V +NA+MLL+FLQENCSR GTY LHR EG + ++LYDV LS+ +WK+++AMLCYRFA R S +A+S P+ +QLQ+RQR+LL + LL E+ + GG H +IC+SV E +ADTYLR Sbjct: 148 FQRILKWKFNDLKMILGSQVLLFSNQEHPAVSLKLHDVDQELSLCTVLDYYLDNVIANIPELAICMHSKGLVRGYKLVETRQIPYMSGTGR---------PLFDVQDVSMNASMLLKFLQENCSRPNGTYWLHRKEGESSLRLYDVDVLSQGGQLKWKYMMAMLCYRFAARASR-------------------------------LANSLAAGTPQLQQQLQQRQRELLRMCMSLLGEIAQKGGAAHSSICSSVSEQLADTYLR 371
BLAST of mRNA_H-elongata_contig10149.130.1 vs. uniprot
Match: A0A329RHS6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RHS6_9STRA) HSP 1 Score: 228 bits (581), Expect = 5.510e-57 Identity = 124/289 (42.91%), Postives = 166/289 (57.44%), Query Frame = 1 Query: 724 SIVPRRPRGNAFESRPPEPAG----FWRAFQWELNGMRLMLGSSLQVCSTSEHPQVSVRLHDGDENLSLCTCLDYYLDNVMENVPELALCMREKGYIQGCRLVNTEDIPYLGSLSRKSHESTAPVPLFDPLVVELNATMLLRFLQENCSREGGTYLLHRSEGAAHVQLYDVSALSRQRNRRWKWLLAMLCYRFALRISHHIHQPLNGGGGPASGADLRGRRSSSDAAPVNVASSFPG--PEAVRQLQRRQRQLLENSLELLEELEKLGGGGHETICASVQEHIADTYLR 1572 S +P PP G F R +W+ N ++++LGS + + S EHP VS++LHD D+ LSLCT LDYYLDNV+ N+PELA+CM KG ++G +LV T IPY+ R PLFD V +NA+MLL+FLQENCSR GTY LHR EG + ++LYDV LS+ +WK+++AMLCYRFA R S +A+S P+ +QLQ+RQR+LL + LL E+ + GG H +IC+SV E +ADTYLR Sbjct: 370 SFIPTETSWFTSAQHPPAFGGDSQTFQRILKWKFNDLKMILGSQVLLFSNQEHPAVSLKLHDMDKELSLCTVLDYYLDNVIANIPELAICMHSKGLVRGYKLVETRQIPYMSGTGR---------PLFDVQDVSMNASMLLKFLQENCSRPNGTYWLHRKEGESSLRLYDVDVLSQGSQLKWKYMMAMLCYRFAARASR-------------------------------LANSLAAGTPQLQQQLQQRQRELLRTCMSLLGEIAQKGGAAHSSICSSVSEQLADTYLR 618
BLAST of mRNA_H-elongata_contig10149.130.1 vs. uniprot
Match: A0A662XVK5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XVK5_9STRA) HSP 1 Score: 227 bits (579), Expect = 1.180e-56 Identity = 118/262 (45.04%), Postives = 164/262 (62.60%), Query Frame = 1 Query: 787 FWRAFQWELNGMRLMLGSSLQVCSTSEHPQVSVRLHDGDENLSLCTCLDYYLDNVMENVPELALCMREKGYIQGCRLVNTEDIPYLGSLSRKSHESTAPVPLFDPLVVELNATMLLRFLQENCSREGGTYLLHRSEGAAHVQLYDVSALSRQRNRRWKWLLAMLCYRFALRISHHIHQPLNGGGGPASGADLRGRRSSSDAAPVNVASSFPGPEAVRQLQRRQRQLLENSLELLEELEKLGGGGHETICASVQEHIADTYLR 1572 F R +W+ + ++++LGS + + S+ EHP VS++LHD D LSLCT LDYYLDNV+ N+PELA+CM KG+++G +LV T IPY+ R PLFD V +NA+MLL+FLQENCSR GTY LHR EG + ++LYDV LS+ + +WK+++AMLCYRFA R S ++ ++AS+ P + +QLQ+RQR LL + LL E+ + GG H +IC+SV E +ADTYLR Sbjct: 444 FQRILKWKFHDLKMILGSQVLLFSSPEHPAVSLKLHDMDTELSLCTVLDYYLDNVIANIPELAICMHSKGFVRGYKLVETRQIPYMSGTGR---------PLFDIQDVSMNASMLLKFLQENCSRPNGTYWLHRKEGESSLRLYDVDVLSQGKQLKWKYMMAMLCYRFAARASRLVN---------------------------SLASATP--QLQQQLQQRQRDLLRTCMNLLGEIAEKGGTAHNSICSSVSEQLADTYLR 667 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10149.130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10149.130.1 >prot_H-elongata_contig10149.130.1 ID=prot_H-elongata_contig10149.130.1|Name=mRNA_H-elongata_contig10149.130.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1429bp QFSVAWPSRRSTSQEGLGNESWFTSRPVAASGDGDGGDDGSSYSRGHGVEback to top mRNA from alignment at H-elongata_contig10149:3..7822- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10149.130.1 ID=mRNA_H-elongata_contig10149.130.1|Name=mRNA_H-elongata_contig10149.130.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7820bp|location=Sequence derived from alignment at H-elongata_contig10149:3..7822- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10149:3..7822- >mRNA_H-elongata_contig10149.130.1 ID=mRNA_H-elongata_contig10149.130.1|Name=mRNA_H-elongata_contig10149.130.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=8574bp|location=Sequence derived from alignment at H-elongata_contig10149:3..7822- (Himanthalia elongata Himel1 dioecious)back to top |