mRNA_H-elongata_contig101354.122.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig101354.122.1 vs. uniprot
Match: D8LBK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK7_ECTSI) HSP 1 Score: 259 bits (663), Expect = 2.900e-80 Identity = 132/168 (78.57%), Postives = 140/168 (83.33%), Query Frame = 1
Query: 10 KSLGTVHFGRICMKPGKPTTFATILGGDA-------ARRRLIFALPGNPVSTLVCSHLFVAPALRRLRGYALHNCMHAQVDARLRAPLRLDPVRPEYHRAVISWNTIAGRFDAASTGSQMSSRLLSMKSANALLCVPRGEGELAAGDTLPALLIGNLPPPSPAGCFHA 492
+SLGTVHFGRI MKPGKPTTFAT AR RL+FALPGNP S+LVCSHLFVAPALRR+RGYAL +CM AQVDARL APLRLD VRPEYHRAV+SWN IAGRFDAASTG+QMS RLLSMKSANALLCVPRGEGELAAG LPA+LIG LPPPS CFHA
Sbjct: 288 ESLGTVHFGRIRMKPGKPTTFATXXXXXXXXXXXXPARPRLVFALPGNPASSLVCSHLFVAPALRRMRGYALPDCMPAQVDARLTAPLRLDSVRPEYHRAVVSWNNIAGRFDAASTGNQMSCRLLSMKSANALLCVPRGEGELAAGQQLPAILIGELPPPSGVSCFHA 455
BLAST of mRNA_H-elongata_contig101354.122.1 vs. uniprot
Match: A0A6H5K7N4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N4_9PHAE) HSP 1 Score: 258 bits (658), Expect = 3.100e-78 Identity = 131/169 (77.51%), Postives = 141/169 (83.43%), Query Frame = 1
Query: 10 KSLGTVHFGRICMKPGKPTTFATILGGDA--------ARRRLIFALPGNPVSTLVCSHLFVAPALRRLRGYALHNCMHAQVDARLRAPLRLDPVRPEYHRAVISWNTIAGRFDAASTGSQMSSRLLSMKSANALLCVPRGEGELAAGDTLPALLIGNLPPPSPAGCFHA 492
+SLGTVHFGRI MKPGKPTTFAT R RLIFALPGNP S+LVCSHLFVAPALRR+RGYAL +CM AQVDARL AP+RLD VRPEYHRA++SWN+IAGRFDAASTG+QMS RLLSMKSANALLCVPRGEGELAAG LPA+LIG LPPPS GCFHA
Sbjct: 437 ESLGTVHFGRIRMKPGKPTTFATTXXXXXXXXXXXXPTRPRLIFALPGNPASSLVCSHLFVAPALRRMRGYALPDCMPAQVDARLTAPVRLDSVRPEYHRALVSWNSIAGRFDAASTGNQMSCRLLSMKSANALLCVPRGEGELAAGQHLPAILIGELPPPSGIGCFHA 605
BLAST of mRNA_H-elongata_contig101354.122.1 vs. uniprot
Match: A0A835YS15_9STRA (MoeA N-terminal region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS15_9STRA) HSP 1 Score: 196 bits (499), Expect = 1.010e-56 Identity = 98/162 (60.49%), Postives = 119/162 (73.46%), Query Frame = 1
Query: 10 KSLGTVHFGRICMKPGKPTTFATILGGDAARRRLIFALPGNPVSTLVCSHLFVAPALRRLRGYALHNCMHAQVDARLRAPLRLDPVRPEYHRAVISWNTIAGRFDAASTGSQMSSRLLSMKSANALLCVPRGEGELAAGDTLPALLIGNLPPPS-PAGCFHA 492
+ +GT+HFGRICMKPGKPTTFAT+ G ++L+ A+PGNPVS LV SHLF APA+RRL G A H CMH+QV L L+LDP RPEYHRAV++W++ A STG Q S RLLSM+ +NALLC+P G AAG + ALLIG++PPPS PA CFHA
Sbjct: 296 EQMGTLHFGRICMKPGKPTTFATVPG----EKKLVLAMPGNPVSCLVTSHLFCAPAMRRLSGQARHLCMHSQVQVVLAETLKLDPERPEYHRAVVTWDSSQNALLANSTGPQASCRLLSMRGSNALLCLPAASGVAAAGSLVTALLIGDIPPPSAPARCFHA 453
BLAST of mRNA_H-elongata_contig101354.122.1 vs. uniprot
Match: A0A7S2V159_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V159_9STRA) HSP 1 Score: 178 bits (451), Expect = 2.960e-49 Identity = 89/160 (55.62%), Postives = 111/160 (69.38%), Query Frame = 1
Query: 10 KSLGTVHFGRICMKPGKPTTFATILGGDAARRRLIFALPGNPVSTLVCSHLFVAPALRRLRGYALHNCMHAQVDARLRAPLRLDPVRPEYHRAVISWNTIAGRFDAASTGSQMSSRLLSMKSANALLCVPRGEGELAAGDTLPALLIGNLPPPSPAGCFH 489
+ +G VHFGRI MKPGKPTTFAT+ GD+ + L FALPGNPVS V + L V PALR+L G CM QV +L L+LDP RPEYHRA ++W+++ A STGSQ+SSRLLSM+ ANALLC+P+ +G + AG ALLI ++P P P CFH
Sbjct: 291 QKIGKVHFGRIKMKPGKPTTFATVPRGDSGKEVLFFALPGNPVSCAVTTRLLVQPALRKLSGADPAQCMLPQVSVKLGQTLKLDPERPEYHRASVTWDSVGCCLVARSTGSQISSRLLSMRGANALLCLPQAQGVMEAGTYATALLIDSIPAPDPKFCFH 450
BLAST of mRNA_H-elongata_contig101354.122.1 vs. uniprot
Match: A0A3M1FS57_9CHLR (Molybdopterin molybdenumtransferase (Fragment) n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1FS57_9CHLR) HSP 1 Score: 162 bits (410), Expect = 1.430e-46 Identity = 90/150 (60.00%), Postives = 105/150 (70.00%), Query Frame = 1
Query: 10 KSLGTVHFGRICMKPGKPTTFATILGGDAARRRLIFALPGNPVSTLVCSHLFVAPALRRLRGYALHNCMHAQVDARLRAPLRLDPVRPEYHRAVISWNTIAGRFDAASTGSQMSSRLLSMKSANALLCVPRGEGELAAGDTLPALLIGNL 459
++ G VHFGRI MKPGKP TFAT+ GD R RLIF LPGNPVS+LV HLF PALR+L G+ + +V ARL PLRLDP RPEYHRA + W+ F A STGSQ SSRLLSM+SANALL +P + L AG + ALLIG+L
Sbjct: 144 EAAGQVHFGRIRMKPGKPLTFATVPSGD--RTRLIFGLPGNPVSSLVTFHLFAVPALRKLAGWPDPHLR--RVQARLAQPLRLDPERPEYHRATLRWDRAQSCFVATSTGSQASSRLLSMRSANALLELPAADDALPAGALVDALLIGDL 289
BLAST of mRNA_H-elongata_contig101354.122.1 vs. uniprot
Match: A0A421FXR2_9STRA (Molybdopterin molybdotransferase n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FXR2_9STRA) HSP 1 Score: 159 bits (402), Expect = 3.730e-44 Identity = 79/147 (53.74%), Postives = 108/147 (73.47%), Query Frame = 1
Query: 10 KSLGTVHFGRICMKPGKPTTFATILGGDAARRRLIFALPGNPVSTLVCSHLFVAPALRRLRGYALHNCMHAQVDARLRAPLRLDPVRPEYHRAVISWNTIAGRFDAASTGSQMSSRLLSMKSANALLCVPRGEGELAAGDTLPALLI 450
+ +GTVHFGR+ MKPGKPTTFAT+ +++L+FALPGNPVS+ HL V PALRRLRG+ + C +A++ A L P++LD RPE+HRA ++W+ +F A STG Q+SSRLLS ++ANALLC+P G E+ GD +PAL++
Sbjct: 59 EEMGTVHFGRLLMKPGKPTTFATL--EVHGKKKLVFALPGNPVSSFTTCHLLVHPALRRLRGFPVFKCQYAKIYATLTHPIKLDAERPEFHRANLAWDIKQHKFLATSTGRQISSRLLSCRNANALLCLPTGS-EVRDGDAVPALVL 202
BLAST of mRNA_H-elongata_contig101354.122.1 vs. uniprot
Match: A0A3L7X231_9CHLR (Molybdopterin molybdenumtransferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3L7X231_9CHLR) HSP 1 Score: 159 bits (401), Expect = 6.540e-44 Identity = 89/150 (59.33%), Postives = 103/150 (68.67%), Query Frame = 1
Query: 19 GTVHFGRICMKPGKPTTFATIL--GGDAARRRLIFALPGNPVSTLVCSHLFVAPALRRLRGYALHNCMHAQ-VDARLRAPLRLDPVRPEYHRAVISWNTIAGRFDAASTGSQMSSRLLSMKSANALLCVPRGEGELAAGDTLPALLIGNL 459
G VHFGR+ MKPGKP TFAT + DA L+F LPGNPVS+LV +LF PA+R L G H H + V ARL PL LDP RPEYHRA + W+T A F A STGSQ SSRLLSM++ANALL +P EGEL AG + ALLIG+L
Sbjct: 272 GQVHFGRVRMKPGKPITFATTITANADADHTCLVFGLPGNPVSSLVTFYLFAVPAIRALAG---HPDPHLRRVQARLSQPLSLDPARPEYHRATLRWDTAANGFVAESTGSQSSSRLLSMRTANALLELPEREGELPAGSLVSALLIGSL 418
BLAST of mRNA_H-elongata_contig101354.122.1 vs. uniprot
Match: A0A6N8WBR8_9CHLR (Molybdopterin molybdenumtransferase n=3 Tax=unclassified Caldilineaceae TaxID=1919254 RepID=A0A6N8WBR8_9CHLR) HSP 1 Score: 158 bits (400), Expect = 8.320e-44 Identity = 87/148 (58.78%), Postives = 106/148 (71.62%), Query Frame = 1
Query: 19 GTVHFGRICMKPGKPTTFATILGGDAAR-RRLIFALPGNPVSTLVCSHLFVAPALRRLRGYALHNCMHAQVDARLRAPLRLDPVRPEYHRAVISWNTIAGRFDAASTGSQMSSRLLSMKSANALLCVPRGEGELAAGDTLPALLIGNL 459
GTVH+GR+ MKPGKP TFAT D + RRL+F LPGNPVS+LV +LFV PALR++ G+ + QV ARL PL LD RPEYHRA +SW+ F AASTGSQ SSRLLSM++ANALL +P+ EG +A G+ + ALLIG L
Sbjct: 273 GTVHYGRVRMKPGKPVTFAT---ADVEQGRRLVFGLPGNPVSSLVTFYLFVVPALRKMAGWP--DPRLRQVQARLAQPLPLDAFRPEYHRATLSWDADQACFAAASTGSQASSRLLSMRTANALLALPQREGTMAVGEPVAALLIGEL 415
BLAST of mRNA_H-elongata_contig101354.122.1 vs. uniprot
Match: A0A3A0BJR5_9CHLR (Molybdopterin molybdenumtransferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3A0BJR5_9CHLR) HSP 1 Score: 157 bits (397), Expect = 2.400e-43 Identity = 90/153 (58.82%), Postives = 107/153 (69.93%), Query Frame = 1
Query: 10 KSLGTVHFGRICMKPGKPTTFATILGGDAARRRLIFALPGNPVSTLVCSHLFVAPALRRLRGYALHNCMHAQVDARLRAPLRLDPVRPEYHRAVISW----NTIAGRFDAASTGSQMSSRLLSMKSANALLCVPRGEGELAAGDTLPALLIGN 456
+ GTVHFGR+ MKPGKP TFAT G +RRLIF LPGNPVS+LV +L V PA+R+L GYA + M +V A L PL LD RPEYHRA++ W N G + A STG Q SSRLLSM++ANALL +P GEGELAAG + ALLIG+
Sbjct: 268 EQAGTVHFGRLRMKPGKPCTFATAAVGG--QRRLIFGLPGNPVSSLVTFYLLVVPAIRKLAGYA--DPMLHRVQAHLAQPLALDAYRPEYHRALLRWDSRLNQGRGGYLATSTGRQASSRLLSMRTANALLELPLGEGELAAGSVVSALLIGH 416
BLAST of mRNA_H-elongata_contig101354.122.1 vs. uniprot
Match: A0A3R7MSF1_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7MSF1_9STRA) HSP 1 Score: 159 bits (401), Expect = 6.580e-43 Identity = 79/148 (53.38%), Postives = 110/148 (74.32%), Query Frame = 1
Query: 10 KSLGTVHFGRICMKPGKPTTFATI-LGGDAARRRLIFALPGNPVSTLVCSHLFVAPALRRLRGYALHNCMHAQVDARLRAPLRLDPVRPEYHRAVISWNTIAGRFDAASTGSQMSSRLLSMKSANALLCVPRGEGELAAGDTLPALLI 450
+ +GT+HFGR+ MKPGKPTTFAT+ + G+ ++L+FALPGNPVS+ HL V PALRRLRG+ + C +A++ A L P++LD RPE+HRA ++W+ +F A STG Q+SSRLLS ++ANALLC+P G E+ GD +PAL++
Sbjct: 212 EEMGTIHFGRLLMKPGKPTTFATLEVHGN---KKLVFALPGNPVSSFTTCHLLVHPALRRLRGFPVFKCQYAKIYATLTHPIKLDAERPEFHRANLAWDIKQHKFLATSTGRQISSRLLSCRNANALLCLPTGS-EVRGGDAVPALVL 355 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig101354.122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig101354.122.1 >prot_H-elongata_contig101354.122.1 ID=prot_H-elongata_contig101354.122.1|Name=mRNA_H-elongata_contig101354.122.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=164bp PPEKSLGTVHFGRICMKPGKPTTFATILGGDAARRRLIFALPGNPVSTLVback to top mRNA from alignment at H-elongata_contig101354:927..2360- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig101354.122.1 ID=mRNA_H-elongata_contig101354.122.1|Name=mRNA_H-elongata_contig101354.122.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1434bp|location=Sequence derived from alignment at H-elongata_contig101354:927..2360- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig101354:927..2360- >mRNA_H-elongata_contig101354.122.1 ID=mRNA_H-elongata_contig101354.122.1|Name=mRNA_H-elongata_contig101354.122.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=984bp|location=Sequence derived from alignment at H-elongata_contig101354:927..2360- (Himanthalia elongata Himel1 dioecious)back to top |