mRNA_H-elongata_contig101243.110.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig101243.110.1 vs. uniprot
Match: D7FWG9_ECTSI (Putative methylene tetrahydrofolate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWG9_ECTSI) HSP 1 Score: 297 bits (761), Expect = 1.690e-98 Identity = 149/190 (78.42%), Postives = 162/190 (85.26%), Query Frame = 1
Query: 1 RECEAEELEARLEEINADPEVHGVMIYYPVFGAFPSFFGGSMDDYLRDTVSVRKDVEGLCHTYRRNLYHNIRCRAVAVELAQHLKVSPEGLSKTKKCILPCTPLAVAKIIEHLGIYDKSLPEGDRLQGKTITIINRSEIVGRPLAAMLANDGAIIYSVDVDSIFLFKRGALRKTEMTPEDATRQSDVVVT 570
REC+ EELEARLEE N DPEVHGVMIYYPVFGAFPSFFGGSMDDYLRDTVS+RKDVEGL +TYRRNLYHN+R A KTKKCILPCTPLAV KI+EH+G+YD+SLP GDRLQGKT+TIINRSEIVGRPLAAMLANDGA IYS+DVDSIF+FKRGALRKTE TPE+A +QSDVVVT
Sbjct: 75 RECDPEELEARLEECNGDPEVHGVMIYYPVFGAFPSFFGGSMDDYLRDTVSIRKDVEGLSNTYRRNLYHNVRFVDEA---------------KTKKCILPCTPLAVVKIMEHVGVYDESLPVGDRLQGKTVTIINRSEIVGRPLAAMLANDGATIYSIDVDSIFVFKRGALRKTEATPEEAVKQSDVVVT 249
BLAST of mRNA_H-elongata_contig101243.110.1 vs. uniprot
Match: A0A835ZC74_9STRA (Putative methylene tetrahydrofolate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC74_9STRA) HSP 1 Score: 244 bits (622), Expect = 1.550e-77 Identity = 119/189 (62.96%), Postives = 145/189 (76.72%), Query Frame = 1
Query: 1 RECEAEELEARLEEINADPEVHGVMIYYPVFGAFPSFFGGSMDDYLRDTVSVRKDVEGLCHTYRRNLYHNIRCRAVAVELAQHLKVSPEGLSKTKKCILPCTPLAVAKIIEHLGIYDKSLPEGDRLQGKTITIINRSEIVGRPLAAMLANDGAIIYSVDVDSIFLFKRGALRKTEMTPEDATRQSDVVV 567
REC E+LE +LEE NADP+VHG+M+YYPVFGAFPSF+GG+MDDYLRD++S KDVEGLCH YRRNLY N+R V+ A+ T+KCILPCTPL+ KI+EHL +YD +LP G RL+GK +TIINRSEIVGRPLAAMLANDGA IYS+D+DSI+ F+RG L + T E A R+S V+
Sbjct: 79 RECTKEDLETKLEEANADPDVHGIMVYYPVFGAFPSFYGGTMDDYLRDSISHEKDVEGLCHLYRRNLYRNVRY----VDAAE-----------TQKCILPCTPLSCVKILEHLAVYDAALPVGARLEGKVVTIINRSEIVGRPLAAMLANDGATIYSIDIDSIYEFRRGRLVVVDETAEGAIRRSHAVI 252
BLAST of mRNA_H-elongata_contig101243.110.1 vs. uniprot
Match: A0A7S2WD37_9STRA (Hypothetical protein n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WD37_9STRA) HSP 1 Score: 241 bits (614), Expect = 2.160e-76 Identity = 115/190 (60.53%), Postives = 143/190 (75.26%), Query Frame = 1
Query: 1 RECEAEELEARLEEINADPEVHGVMIYYPVFGAFPSFFGGSMDDYLRDTVSVRKDVEGLCHTYRRNLYHNIRCRAVAVELAQHLKVSPEGLSKTKKCILPCTPLAVAKIIEHLGIYDKSLPEGDRLQGKTITIINRSEIVGRPLAAMLANDGAIIYSVDVDSIFLFKRGALRKTEMTPEDATRQSDVVVT 570
REC +LE +L+E N DP+VHG+MIYYP FG PSF+GG MDD+LRD+V+V KDVEGLC TYR NLYHN+R HL G+ KKC+LPCTPLA+ KI+EHL +YD+SLP GDR++G T+TI+NRSEIVGRPL AMLANDGA +YSVD+DSI+L +RG + +E+ E A R S V+VT
Sbjct: 68 RECHPHDLETKLKEANEDPKVHGIMIYYPCFGGVPSFYGGKMDDHLRDSVAVEKDVEGLCFTYRHNLYHNVRS-------LPHLS----GVPSDKKCLLPCTPLAIVKILEHLKVYDESLPLGDRMKGNTVTIVNRSEIVGRPLGAMLANDGADVYSVDIDSIYLMRRGKMLPSEIDVEKACRMSKVIVT 246
BLAST of mRNA_H-elongata_contig101243.110.1 vs. uniprot
Match: A0A2R5GR89_9STRA (Methylenetetrahydrofolate dehydrogenase NAD n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GR89_9STRA) HSP 1 Score: 237 bits (604), Expect = 7.700e-75 Identity = 115/190 (60.53%), Postives = 148/190 (77.89%), Query Frame = 1
Query: 1 RECEAEELEARLEEINADPEVHGVMIYYPVFGAFPSFFGGSMDDYLRDTVSVRKDVEGLCHTYRRNLYHNIRCRAVAVELAQHLKVSPEGLSKTKKCILPCTPLAVAKIIEHLGIYDKSLPEGDRLQGKTITIINRSEIVGRPLAAMLANDGAIIYSVDVDSIFLFKRGALRKTEMTPEDATRQSDVVVT 570
REC+ +LEA+++E N DP+VHG+MIYYP FGA PSF+GG MDD+LRD V+V KDVEGLC+TYR NLYHN+R Q +S G KKC+LPCTPLA+ KI+E+L +YD++LP GDR+ G+T+TIINRSEIVGRPL AMLANDGA +YSVD+DSI+L +R + TE+T E+A ++S V+VT
Sbjct: 72 RECKPLDLEAKVQEANEDPKVHGIMIYYPCFGAVPSFYGGRMDDHLRDLVAVEKDVEGLCYTYRHNLYHNVR---------QLPMIS--GEPSDKKCLLPCTPLALVKILEYLKVYDEALPLGDRMSGQTVTIINRSEIVGRPLGAMLANDGADVYSVDIDSIYLMRRAKMLPTEVTVEEACKKSRVIVT 250
BLAST of mRNA_H-elongata_contig101243.110.1 vs. uniprot
Match: A0A7S3LJ10_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LJ10_9STRA) HSP 1 Score: 235 bits (599), Expect = 3.780e-74 Identity = 116/190 (61.05%), Postives = 144/190 (75.79%), Query Frame = 1
Query: 1 RECEAEELEARLEEINADPEVHGVMIYYPVFGAFPSFFGGSMDDYLRDTVSVRKDVEGLCHTYRRNLYHNIRCRAVAVELAQHLKVSPEGLSKTKKCILPCTPLAVAKIIEHLGIYDKSLPEGDRLQGKTITIINRSEIVGRPLAAMLANDGAIIYSVDVDSIFLFKRGALRKTEMTPEDATRQSDVVVT 570
REC+A ELE +L E N D VHG+MIYYP FGA PSF+GG+MDDYLRD+V+V KDVEGLCHTYR +LYH++R LK G +KKC+LPCTPLA+ K +EHL +YD SLP G+RL+GKT+T+INRSEIVGRPL+AM+ANDGA +YSVD+ SI+L KRG + +T+ E A R S V+VT
Sbjct: 68 RECKALELEDKLNEANKDKNVHGIMIYYPCFGAKPSFYGGNMDDYLRDSVAVEKDVEGLCHTYRTSLYHDVR----------FLKTL-SGSVTSKKCLLPCTPLAIVKALEHLKLYDSSLPVGERLRGKTVTVINRSEIVGRPLSAMIANDGADVYSVDISSIYLLKRGKMIETKKDVETACRGSQVIVT 246
BLAST of mRNA_H-elongata_contig101243.110.1 vs. uniprot
Match: K3WD34_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD34_GLOUD) HSP 1 Score: 231 bits (589), Expect = 1.140e-73 Identity = 112/190 (58.95%), Postives = 142/190 (74.74%), Query Frame = 1
Query: 1 RECEAEELEARLEEINADPEVHGVMIYYPVFGAFPSFFGGSMDDYLRDTVSVRKDVEGLCHTYRRNLYHNIRCRAVAVELAQHLKVSPEGLSKTKKCILPCTPLAVAKIIEHLGIYDKSLPEGDRLQGKTITIINRSEIVGRPLAAMLANDGAIIYSVDVDSIFLFKRGALRKTEMTPEDATRQSDVVVT 570
RE E ++L LE N DP+VHG+++YYP FG FPSFFGG+MDD+LRD++S++KDVEGLC YR NLY NIR V E KT+KC+LPCTPLA+ KI+EHL +YDK+ P G+ L G IT+INRS+IVGRPLAAM ANDGA +YSVD+DS++LF+RG L KTE TPE A ++S V++T
Sbjct: 4 REVEKDDLLEALESANHDPDVHGIIVYYPCFGIFPSFFGGTMDDFLRDSISIKKDVEGLCQFYRGNLYRNIRY------------VDDE---KTQKCVLPCTPLAIVKILEHLNVYDKTKPVGNHLSGVNITVINRSDIVGRPLAAMFANDGADVYSVDIDSLYLFRRGKLIKTEETPETACKKSRVIIT 178
BLAST of mRNA_H-elongata_contig101243.110.1 vs. uniprot
Match: A0A024TJB3_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024TJB3_9STRA) HSP 1 Score: 232 bits (591), Expect = 3.560e-73 Identity = 110/190 (57.89%), Postives = 146/190 (76.84%), Query Frame = 1
Query: 1 RECEAEELEARLEEINADPEVHGVMIYYPVFGAFPSFFGGSMDDYLRDTVSVRKDVEGLCHTYRRNLYHNIRCRAVAVELAQHLKVSPEGLSKTKKCILPCTPLAVAKIIEHLGIYDKSLPEGDRLQGKTITIINRSEIVGRPLAAMLANDGAIIYSVDVDSIFLFKRGALRKTEMTPEDATRQSDVVVT 570
RE + E L+ +E+ N DPEVHG+++YYP FG+FPSF+GG+MDD++RD++S++KDVEGLCH YR NLY NIR V E +T+KC+LPCTPLA+ KI+EHL IY+ PEG+ L G+ ITIINRS+IVGRPLAAMLANDGA ++SVD+ S++LF+RG L +T+ TPE A R+SDV++T
Sbjct: 63 REVQKEFLQEAVEDANRDPEVHGILVYYPCFGSFPSFYGGTMDDFIRDSISIKKDVEGLCHFYRSNLYRNIRY------------VDDE---RTQKCVLPCTPLAIIKILEHLNIYNFGQPEGEHLLGRRITIINRSDIVGRPLAAMLANDGADVFSVDISSLYLFRRGKLIETDETPESACRKSDVIIT 237
BLAST of mRNA_H-elongata_contig101243.110.1 vs. uniprot
Match: A0A3R6Z9J8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Z9J8_9STRA) HSP 1 Score: 229 bits (583), Expect = 2.370e-72 Identity = 111/193 (57.51%), Postives = 146/193 (75.65%), Query Frame = 1
Query: 1 RECEAEELEARLEEINADPEVHGVMIYYPVFGAFPSFFGGSMDDYLRDTVSVRKDVEGLCHTYRRNLYHNIRCRAVAVELAQHLKVSPEGLSKTKKCILPCTPLAVAKIIEHLGIYDKSLPEGDRLQGKTITIINRSEIVGRPLAAMLANDGAIIYSVDVDSIFLFKRGAL---RKTEMTPEDATRQSDVVVT 570
RE + E L+ +E+ N DPEVHG+++YYP FG+FPSF+GG+MDD++RD++S++KDVEGLCH YR NLY NIR V E +T+KC+LPCTPLA+ KI+EHL IY+ PEG+ L G+ ITIINRS+IVGRPLAAMLANDGA ++SVD+ S++LF+RG L R T+ TPE A R+SDV++T
Sbjct: 63 REVQKEFLQEAVEDANRDPEVHGILVYYPCFGSFPSFYGGTMDDFIRDSISIKKDVEGLCHFYRSNLYRNIRY------------VDDE---RTQKCVLPCTPLAIIKILEHLNIYNFGQPEGEHLLGRRITIINRSDIVGRPLAAMLANDGADVFSVDISSLYLFRRGKLIEVRHTDETPESACRKSDVIIT 240
BLAST of mRNA_H-elongata_contig101243.110.1 vs. uniprot
Match: H3G7B7_PHYRM (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=H3G7B7_PHYRM) HSP 1 Score: 229 bits (584), Expect = 2.430e-72 Identity = 112/190 (58.95%), Postives = 142/190 (74.74%), Query Frame = 1
Query: 1 RECEAEELEARLEEINADPEVHGVMIYYPVFGAFPSFFGGSMDDYLRDTVSVRKDVEGLCHTYRRNLYHNIRCRAVAVELAQHLKVSPEGLSKTKKCILPCTPLAVAKIIEHLGIYDKSLPEGDRLQGKTITIINRSEIVGRPLAAMLANDGAIIYSVDVDSIFLFKRGALRKTEMTPEDATRQSDVVVT 570
RE ++L A LE N DPEVHG+++YYP FG FPSFFGGSMDD+LRD++S++KDVEGLC YR NLY N+R V E +T+KC+LPCTPLA+ KI+EH+GIYDKS P+GD L G IT+INRS+IVGRPLAAMLANDGA +YS D+DS++LF+RG L +E T E A ++S V++T
Sbjct: 59 REVPKDDLLAALELANHDPEVHGILVYYPCFGPFPSFFGGSMDDFLRDSISIKKDVEGLCQFYRGNLYRNLRY------------VDDE---QTQKCVLPCTPLAIVKILEHIGIYDKSKPDGDHLAGVNITVINRSDIVGRPLAAMLANDGADVYSADIDSLYLFRRGKLIPSEETQETACKKSRVIIT 233
BLAST of mRNA_H-elongata_contig101243.110.1 vs. uniprot
Match: A0A7S3XWK6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWK6_HETAK) HSP 1 Score: 226 bits (576), Expect = 4.200e-72 Identity = 112/171 (65.50%), Postives = 128/171 (74.85%), Query Frame = 1
Query: 1 RECEAEELEARLEEINADPEVHGVMIYYPVFGAFPSFFGGSMDDYLRDTVSVRKDVEGLCHTYRRNLYHNIRCRAVAVELAQHLKVSPEGLSKTKKCILPCTPLAVAKIIEHLGIYDKSLPEGDRLQGKTITIINRSEIVGRPLAAMLANDGAIIYSVDVDSIFLFKRGAL 513
R E EELE +L+E N DP VHG+MIYYPVFGA PSFFGGSMD+YLRD +S KDVEGLCHTYR NLY NIR K KKC+LPCT L+V KI+EHL +Y+ SLP G+R+ GKTITIINRSE+VGRPLAAMLANDGA++YSVD+DSIF F RG L
Sbjct: 67 RRVEEEELEDKLKEANEDPSVHGIMIYYPVFGAHPSFFGGSMDEYLRDCISPEKDVEGLCHTYRMNLYRNIRFM---------------DREKKKKCVLPCTALSVVKILEHLHVYENSLPFGNRMVGKTITIINRSEVVGRPLAAMLANDGALVYSVDIDSIFAFMRGHL 222 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig101243.110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig101243.110.1 >prot_H-elongata_contig101243.110.1 ID=prot_H-elongata_contig101243.110.1|Name=mRNA_H-elongata_contig101243.110.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=190bp RECEAEELEARLEEINADPEVHGVMIYYPVFGAFPSFFGGSMDDYLRDTVback to top mRNA from alignment at H-elongata_contig101243:562..2252- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig101243.110.1 ID=mRNA_H-elongata_contig101243.110.1|Name=mRNA_H-elongata_contig101243.110.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1691bp|location=Sequence derived from alignment at H-elongata_contig101243:562..2252- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig101243:562..2252- >mRNA_H-elongata_contig101243.110.1 ID=mRNA_H-elongata_contig101243.110.1|Name=mRNA_H-elongata_contig101243.110.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1140bp|location=Sequence derived from alignment at H-elongata_contig101243:562..2252- (Himanthalia elongata Himel1 dioecious)back to top |