mRNA_H-elongata_contig100923.84.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig100923.84.1 vs. uniprot
Match: A0A6H5JYR9_9PHAE (A protein ( P-DTprotein, P-DH protein ) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYR9_9PHAE) HSP 1 Score: 256 bits (653), Expect = 4.170e-78 Identity = 118/148 (79.73%), Postives = 136/148 (91.89%), Query Frame = 1 Query: 10 GAKFYPQFEASEFFSNDIDVVVFAVSVLSFEEVLKSIPSTFFKGKLVVDVLSVKTHAKETMLESLPLEADIMCTHPMFGPDSGANGWSGLPFVYERVRVTDHSRAADFLSIWEKERCRMVEMSCELHDKYAANTQFITHLTGRILGKQ 453 GAKFYPQFE+S+FF+ND+DVVVFAVS+LSFEEVLKSIP F KGKLVVDVLSVK H ++T+LE+LP + DI+CTHPMFGP+SGANGW+GLPF+++RVR DH+R ADFLSIWE ERC+MVEMSCELHDKYAANTQFITHL GRILGKQ Sbjct: 488 GAKFYPQFESSDFFANDLDVVVFAVSILSFEEVLKSIPEKFLKGKLVVDVLSVKMHPRQTLLETLPPDTDILCTHPMFGPESGANGWAGLPFLFDRVRTKDHARTADFLSIWEGERCKMVEMSCELHDKYAANTQFITHLMGRILGKQ 635
BLAST of mRNA_H-elongata_contig100923.84.1 vs. uniprot
Match: A0A835YRB8_9STRA (Trifunctional chorismate Mutase/Prephenate Dehydratase/Prephenate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRB8_9STRA) HSP 1 Score: 232 bits (592), Expect = 6.310e-70 Identity = 108/148 (72.97%), Postives = 131/148 (88.51%), Query Frame = 1 Query: 10 GAKFYPQFEASEFFSNDIDVVVFAVSVLSFEEVLKSIPSTFFKGKLVVDVLSVKTHAKETMLESLPLEADIMCTHPMFGPDSGANGWSGLPFVYERVRVTDHSRAADFLSIWEKERCRMVEMSCELHDKYAANTQFITHLTGRILGKQ 453 GA+FYP +E EFF +DVVVFAVS+LSFEEVL++IP+ + +GKLVVDVLSVK HAK+TML++LP +ADI+CTHPMFGP+SG GW LPFVY++VRV DH RA+DFL+IWE+ERC+MVEMSCELHD+YAANTQFITHL GRILG+Q Sbjct: 402 GARFYPMYEQDEFFRG-LDVVVFAVSILSFEEVLRNIPAEYLRGKLVVDVLSVKVHAKKTMLDALPGDADILCTHPMFGPESGRAGWQSLPFVYDKVRVGDHERASDFLAIWEQERCKMVEMSCELHDEYAANTQFITHLMGRILGEQ 548
BLAST of mRNA_H-elongata_contig100923.84.1 vs. uniprot
Match: W7U342_9STRA (Arogenate dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U342_9STRA) HSP 1 Score: 211 bits (537), Expect = 1.820e-61 Identity = 98/148 (66.22%), Postives = 122/148 (82.43%), Query Frame = 1 Query: 10 GAKFYPQFEASEFFSNDIDVVVFAVSVLSFEEVLKSIPSTFFKGKLVVDVLSVKTHAKETMLESLPLEADIMCTHPMFGPDSGANGWSGLPFVYERVRVTDHSRAADFLSIWEKERCRMVEMSCELHDKYAANTQFITHLTGRILGKQ 453 G F+P ++A+EFF D+DVVV +VS+L+FEEVL S+P+ +GKL+VDVLSVK H K MLESLP + DI+C HPMFGP+SG GW GLPFVYERVR+ D +RA FLSI+E ERC+M+EMSC+ HDKYAA++QFITHLTGRILG+Q Sbjct: 463 GVPFFPLYDATEFFRQDLDVVVLSVSILAFEEVLTSLPAEALRGKLLVDVLSVKVHPKTVMLESLPGDVDIICAHPMFGPESGKFGWQGLPFVYERVRIQDFARAERFLSIFEVERCKMIEMSCDTHDKYAADSQFITHLTGRILGQQ 610
BLAST of mRNA_H-elongata_contig100923.84.1 vs. uniprot
Match: A0A7S3UT44_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UT44_HETAK) HSP 1 Score: 193 bits (491), Expect = 2.180e-58 Identity = 86/148 (58.11%), Postives = 114/148 (77.03%), Query Frame = 1 Query: 10 GAKFYPQFEASEFFSNDIDVVVFAVSVLSFEEVLKSIPSTFFKGKLVVDVLSVKTHAKETMLESLPLEADIMCTHPMFGPDSGANGWSGLPFVYERVRVTDHSRAADFLSIWEKERCRMVEMSCELHDKYAANTQFITHLTGRILGKQ 453 GAKFYP ++ + F N++DV++ SV+SFE++L ++P + L+VDVLSVK H KE M+ SLP DI+CTHPMFGP+SG W GL FV+++VR+++ RA FLSIW+ ERC+MVEM CELHD+YAAN+QFITHL GRILG+Q Sbjct: 59 GAKFYPSYDVANFLKNNLDVIIMCTSVISFEQMLGTLPKDQLRDCLLVDVLSVKMHPKEVMMTSLPPSTDILCTHPMFGPESGKYSWQGLSFVFDKVRISNPKRADQFLSIWDSERCKMVEMPCELHDEYAANSQFITHLMGRILGQQ 206
BLAST of mRNA_H-elongata_contig100923.84.1 vs. uniprot
Match: A0A7S2UZC4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZC4_9STRA) HSP 1 Score: 199 bits (505), Expect = 3.220e-57 Identity = 91/148 (61.49%), Postives = 117/148 (79.05%), Query Frame = 1 Query: 10 GAKFYPQFEASEFFSNDIDVVVFAVSVLSFEEVLKSIPSTFFKGKLVVDVLSVKTHAKETMLESLPLEADIMCTHPMFGPDSGANGWSGLPFVYERVRVTDHSRAADFLSIWEKERCRMVEMSCELHDKYAANTQFITHLTGRILGKQ 453 G KF+P FE + F ++DVV+ A S+LSF+++LKS+P +GKL+VDVLSVKTHAKE+ML +LP E DI+CTHPMFGP+SG W GL VY+RVR+ D R FL+++E ERC+MV+MSCELHD+YAAN+QFITHL GRIL +Q Sbjct: 420 GVKFFPLFEITSFLKQELDVVLIATSILSFDDILKSLPLQELRGKLLVDVLSVKTHAKESMLATLPPEVDILCTHPMFGPESGKYSWQGLALVYDRVRIKDQERCDRFLNMFEMERCKMVDMSCELHDEYAANSQFITHLMGRILAQQ 567
BLAST of mRNA_H-elongata_contig100923.84.1 vs. uniprot
Match: A0A6C0HW13_9ZZZZ (Prephenate/arogenate dehydrogenase domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HW13_9ZZZZ) HSP 1 Score: 170 bits (430), Expect = 8.330e-50 Identity = 74/148 (50.00%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 10 GAKFYPQFEASEFFSNDIDVVVFAVSVLSFEEVLKSIPSTFFKGKLVVDVLSVKTHAKETMLESLPLEADIMCTHPMFGPDSGANGWSGLPFVYERVRVTDHSRAADFLSIWEKERCRMVEMSCELHDKYAANTQFITHLTGRILGKQ 453 G ++ + S + D+DV++F+VS++SF +VL S+P F KL+VDVLSVK + + M E LP + DI+CTHPMFGP+SG GW L FVY+++R+T+ +R FL IW+KE C M++MSCE HDKY A +QF+TH+T RI+ +Q Sbjct: 75 GCRYISLDDVSTIATLDLDVILFSVSIMSFHQVLTSLPKNLFHNKLIVDVLSVKEYPCKEMKEQLPKDCDILCTHPMFGPESGKFGWKDLTFVYDKIRITNETRCKQFLQIWKKEECNMIKMSCEQHDKYTAKSQFVTHVTSRIIEEQ 222
BLAST of mRNA_H-elongata_contig100923.84.1 vs. uniprot
Match: A0A7S1TLD2_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TLD2_9RHOD) HSP 1 Score: 166 bits (421), Expect = 4.030e-49 Identity = 77/129 (59.69%), Postives = 98/129 (75.97%), Query Frame = 1 Query: 64 DVVVFAVSVLSFEEVLKSIPSTFFKGKLVVDVLSVKTHAKETMLESLPLEADIMCTHPMFGPDSGANGWSGLPFVYERVRVTDHSRAADFLSIWEKERCRMVEMSCELHDKYAANTQFITHLTGRILGK 450 DVVV S++S ++VL + P + LVVDVLSVK + K+ +LE LP ADI+CTHPMFGP+SG + W+GLPFV+E VR +D R A FL IWE+ERC M EMSCE HD+YAA+TQF+TH TGR+LG+ Sbjct: 31 DVVVLCTSIVSTKQVLLAFPPALLESTLVVDVLSVKAYPKQLLLELLPRSADILCTHPMFGPESGRHSWAGLPFVFETVRASDAHRVARFLRIWERERCVMEEMSCEQHDEYAASTQFVTHTTGRMLGQ 159
BLAST of mRNA_H-elongata_contig100923.84.1 vs. uniprot
Match: M2YA99_GALSU (Prephenate dehydrogenase family protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2YA99_GALSU) HSP 1 Score: 166 bits (420), Expect = 1.380e-48 Identity = 79/147 (53.74%), Postives = 104/147 (70.75%), Query Frame = 1 Query: 10 GAKFYPQFEASEFFSNDIDVVVFAVSVLSFEEVLKSIPSTFFKGKLVVDVLSVKTHAKETMLESLPLEADIMCTHPMFGPDSGANGWSGLPFVYERVRVTDHSRAADFLSIWEKERCRMVEMSCELHDKYAANTQFITHLTGRILGK 450 GA + P EA++ + DVV+F S+ S V+++ P +GKLVVDVLSVK + K+ +LE LP EAD++CTHPMFGP+SG W GLPFVYE+VR++D +R FL I+ C M+ MSCELHD YAA++QFITH TGR+L K Sbjct: 49 GALYVP--EATDMMGEEPDVVLFCTSITSTRSVIEAFPIDALRGKLVVDVLSVKAYPKKLLLELLPPEADVLCTHPMFGPESGRYSWKGLPFVYEQVRISDGARCETFLGIFSSALCTMIPMSCELHDSYAASSQFITHTTGRMLAK 193
BLAST of mRNA_H-elongata_contig100923.84.1 vs. uniprot
Match: A0A7S0NQR9_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NQR9_9EUKA) HSP 1 Score: 174 bits (442), Expect = 9.560e-48 Identity = 85/147 (57.82%), Postives = 106/147 (72.11%), Query Frame = 1 Query: 10 GAKFYPQFEASEFFSNDIDVVVFAVSVLSFEEVLKSIPSTFFKGKLVVDVLSVKTHAKETMLESLPLEADIMCTHPMFGPDSGANGWSGLPFVYERVRVTDHSRAADFLSIWEKERCRMVEMSCELHDKYAANTQFITHLTGRILGK 450 G +Y EA F +DVVV ++S+LSFE VL +P+ LV+DVLSVKTHAK+ ML+ LP ADI+CTHPMFGP+SG GW LP VYE+VRV DH RAA L ++E+E C MV MSCE+HD+ AA +QF+THLTGR+L K Sbjct: 378 GVCYYSSIEA--FAEEPLDVVVLSISILSFETVLAKLPAKLLADALVLDVLSVKTHAKQVMLQLLPPSADILCTHPMFGPESGKAGWHSLPCVYEQVRVRDHHRAARVLGLFEEEGCTMVRMSCEMHDQLAAGSQFVTHLTGRLLAK 522
BLAST of mRNA_H-elongata_contig100923.84.1 vs. uniprot
Match: A0A1E7F353_9STRA (Arogenate dehydrogenase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F353_9STRA) HSP 1 Score: 168 bits (425), Expect = 1.640e-47 Identity = 85/164 (51.83%), Postives = 110/164 (67.07%), Query Frame = 1 Query: 10 GAKFYPQFEASEFFSNDIDVVVFAVSVLSFEEVLKSIP---------STFFKGKLVVDVLSVKTHAKETMLESLPLEADIMCTHPMFGPDSGANGWSGLPFVYERVRVTD---HSRAAD----FLSIWEKERCRMVEMSCELHDKYAANTQFITHLTGRILGKQ 453 GA + P + F ++DV++ A S++SF+ +K++ S KG L+VDVLSVK HA++ +LE LP E DI+CTHPMFGPDSG NGW L FVYE+ RV ++ A D FLSIWE+E CRMV +SC+ HD+YAAN+QFITHL GRILG Q Sbjct: 180 GADYVPLSDPQSFLDQNLDVIIVATSIVSFDSTIKTLAPQLEEYISKSKTNKGPLIVDVLSVKEHARDILLEQLPKECDILCTHPMFGPDSGKNGWHNLNFVYEKTRVDQLYSYTEAMDRIERFLSIWEEEGCRMVPLSCKSHDEYAANSQFITHLMGRILGAQ 343 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100923.84.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig100923.84.1 >prot_H-elongata_contig100923.84.1 ID=prot_H-elongata_contig100923.84.1|Name=mRNA_H-elongata_contig100923.84.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=151bp ALAGAKFYPQFEASEFFSNDIDVVVFAVSVLSFEEVLKSIPSTFFKGKLVback to top mRNA from alignment at H-elongata_contig100923:1094..2281+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig100923.84.1 ID=mRNA_H-elongata_contig100923.84.1|Name=mRNA_H-elongata_contig100923.84.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1188bp|location=Sequence derived from alignment at H-elongata_contig100923:1094..2281+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig100923:1094..2281+ >mRNA_H-elongata_contig100923.84.1 ID=mRNA_H-elongata_contig100923.84.1|Name=mRNA_H-elongata_contig100923.84.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=906bp|location=Sequence derived from alignment at H-elongata_contig100923:1094..2281+ (Himanthalia elongata Himel1 dioecious)back to top |