mRNA_H-elongata_contig100900.82.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig100900.82.1 vs. uniprot
Match: A0A097IUV6_SARHM (Aspartate aminotransferase n=1 Tax=Sargassum hemiphyllum var. chinense TaxID=425012 RepID=A0A097IUV6_SARHM) HSP 1 Score: 214 bits (544), Expect = 6.630e-66 Identity = 95/118 (80.51%), Postives = 106/118 (89.83%), Query Frame = 1 Query: 10 QTLSGTGACRVAGELFARFRGAKSPIYIPNPTWGNHVAIFKNSGLDVRRYRYYDPNTLALDFEGLMSDIQSAEDGSLFLLHACAHNPTGVDPTHKQWADMSATMKAKGHVVFFDCAYQ 363 Q+LSGTGACRVAGELFARFRG SPIYIP PTWGNHV +F +GL+VRRYRYYDPNTL LDFEGLMSD+++A+DGSLFLLHACAHNPTGVDPT +QWA++S MKAK HV FFDCAYQ Sbjct: 117 QSLSGTGACRVAGELFARFRGEGSPIYIPTPTWGNHVNVFDKAGLEVRRYRYYDPNTLGLDFEGLMSDVEAADDGSLFLLHACAHNPTGVDPTQEQWAELSMAMKAKRHVAFFDCAYQ 234
BLAST of mRNA_H-elongata_contig100900.82.1 vs. uniprot
Match: A0A097IUU3_9PHAE (Aspartate aminotransferase n=6 Tax=Sargassum TaxID=3015 RepID=A0A097IUU3_9PHAE) HSP 1 Score: 212 bits (539), Expect = 3.830e-65 Identity = 93/118 (78.81%), Postives = 107/118 (90.68%), Query Frame = 1 Query: 10 QTLSGTGACRVAGELFARFRGAKSPIYIPNPTWGNHVAIFKNSGLDVRRYRYYDPNTLALDFEGLMSDIQSAEDGSLFLLHACAHNPTGVDPTHKQWADMSATMKAKGHVVFFDCAYQ 363 Q+LSGTGACRVAGELFARFRG +SPIYIPNPTWGNHV +F+ +GL+VRRYRYYD NTL LDF+GLMSD++SA+DGSLFLLHACAHNPTGVDP+ +QW+ +S MKAK HV FFDCAYQ Sbjct: 118 QSLSGTGACRVAGELFARFRGERSPIYIPNPTWGNHVNVFEKAGLEVRRYRYYDSNTLGLDFQGLMSDVESADDGSLFLLHACAHNPTGVDPSQEQWSQLSMAMKAKRHVAFFDCAYQ 235
BLAST of mRNA_H-elongata_contig100900.82.1 vs. uniprot
Match: A0A097IUU0_9PHAE (Aspartate aminotransferase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097IUU0_9PHAE) HSP 1 Score: 210 bits (535), Expect = 8.460e-65 Identity = 92/118 (77.97%), Postives = 105/118 (88.98%), Query Frame = 1 Query: 10 QTLSGTGACRVAGELFARFRGAKSPIYIPNPTWGNHVAIFKNSGLDVRRYRYYDPNTLALDFEGLMSDIQSAEDGSLFLLHACAHNPTGVDPTHKQWADMSATMKAKGHVVFFDCAYQ 363 QTLSGTGACRV GEL ARFRG +PIY+PNPTWGNH+ IFKNSGL+VR+YRYYDP T+ LDF+GL+SD+Q+AED SLFLLHACAHNPTGVDPT +QWA++S MKAK H VFFDCAYQ Sbjct: 102 QTLSGTGACRVMGELMARFRGQGTPIYVPNPTWGNHIPIFKNSGLEVRKYRYYDPKTVGLDFQGLLSDVQAAEDDSLFLLHACAHNPTGVDPTREQWAELSKLMKAKKHTVFFDCAYQ 219
BLAST of mRNA_H-elongata_contig100900.82.1 vs. uniprot
Match: A0A097IUS2_UNDPI (Aspartate aminotransferase n=4 Tax=Laminariales TaxID=2886 RepID=A0A097IUS2_UNDPI) HSP 1 Score: 210 bits (534), Expect = 1.160e-64 Identity = 91/118 (77.12%), Postives = 106/118 (89.83%), Query Frame = 1 Query: 10 QTLSGTGACRVAGELFARFRGAKSPIYIPNPTWGNHVAIFKNSGLDVRRYRYYDPNTLALDFEGLMSDIQSAEDGSLFLLHACAHNPTGVDPTHKQWADMSATMKAKGHVVFFDCAYQ 363 QTLSGTGACRVAGELFARFRGA SPIY+PNPTWGNH+ IFKN+GLDVR+YRYYDP T+ LDF+GL+SD++ AED S+FLLHACAHNPTGVDPT +QW ++SA MK+K + FFDCAYQ Sbjct: 101 QTLSGTGACRVAGELFARFRGAGSPIYLPNPTWGNHIPIFKNAGLDVRKYRYYDPKTVGLDFQGLLSDVRGAEDESIFLLHACAHNPTGVDPTQEQWKELSALMKSKKQIAFFDCAYQ 218
BLAST of mRNA_H-elongata_contig100900.82.1 vs. uniprot
Match: A0A097IUS3_9PHAE (Aspartate aminotransferase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A097IUS3_9PHAE) HSP 1 Score: 208 bits (529), Expect = 6.570e-64 Identity = 91/118 (77.12%), Postives = 105/118 (88.98%), Query Frame = 1 Query: 10 QTLSGTGACRVAGELFARFRGAKSPIYIPNPTWGNHVAIFKNSGLDVRRYRYYDPNTLALDFEGLMSDIQSAEDGSLFLLHACAHNPTGVDPTHKQWADMSATMKAKGHVVFFDCAYQ 363 QTLSGTGACRVAGELFARFRG S IY+PNPTWGNH+ IFKN+GL+V++YRYYDPNT+ LDFEGL+SD+Q A+D S+FLLHACAHNPTGVDPT QWA++S MKAK H+ FFDCAYQ Sbjct: 101 QTLSGTGACRVAGELFARFRGEGSAIYVPNPTWGNHIPIFKNAGLEVKKYRYYDPNTVGLDFEGLLSDVQVADDESVFLLHACAHNPTGVDPTRDQWAELSKLMKAKKHIPFFDCAYQ 218
BLAST of mRNA_H-elongata_contig100900.82.1 vs. uniprot
Match: D7FVR8_ECTSI (Aspartate aminotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVR8_ECTSI) HSP 1 Score: 201 bits (512), Expect = 2.340e-61 Identity = 86/118 (72.88%), Postives = 103/118 (87.29%), Query Frame = 1 Query: 10 QTLSGTGACRVAGELFARFRGAKSPIYIPNPTWGNHVAIFKNSGLDVRRYRYYDPNTLALDFEGLMSDIQSAEDGSLFLLHACAHNPTGVDPTHKQWADMSATMKAKGHVVFFDCAYQ 363 QTLSGTGACRV GELFARFRG S IY+PNPTWGNH+ IFKN+GL+V++YRY+DP T+ LDFEGL+SD+Q+AED S+FLLHACAHNPTG+DP+ QWA++S MK+K H FFDCAYQ Sbjct: 101 QTLSGTGACRVMGELFARFRGTGSAIYVPNPTWGNHIPIFKNAGLEVKKYRYFDPETVGLDFEGLISDVQAAEDESVFLLHACAHNPTGIDPSQDQWAELSKVMKSKKHTAFFDCAYQ 218
BLAST of mRNA_H-elongata_contig100900.82.1 vs. uniprot
Match: A0A097IUW9_PETFA (Aspartate aminotransferase n=4 Tax=Ectocarpales TaxID=2877 RepID=A0A097IUW9_PETFA) HSP 1 Score: 199 bits (507), Expect = 1.310e-60 Identity = 85/118 (72.03%), Postives = 102/118 (86.44%), Query Frame = 1 Query: 10 QTLSGTGACRVAGELFARFRGAKSPIYIPNPTWGNHVAIFKNSGLDVRRYRYYDPNTLALDFEGLMSDIQSAEDGSLFLLHACAHNPTGVDPTHKQWADMSATMKAKGHVVFFDCAYQ 363 QTLSGTGACRV GE+FARFRG S IY+PNPTWGNH+ I KN+GL+V++YRY+DP T+ LDFEGL+SD+Q+AED S+FLLHACAHNPTG+DPT QWA++S MK+K H FFDCAYQ Sbjct: 101 QTLSGTGACRVMGEMFARFRGEGSAIYVPNPTWGNHIPIMKNAGLEVKKYRYFDPETVGLDFEGLLSDVQAAEDESVFLLHACAHNPTGIDPTQDQWAELSKLMKSKKHTAFFDCAYQ 218
BLAST of mRNA_H-elongata_contig100900.82.1 vs. uniprot
Match: A0A835Z2I3_9STRA (Aspartate aminotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2I3_9STRA) HSP 1 Score: 193 bits (491), Expect = 7.210e-58 Identity = 85/123 (69.11%), Postives = 101/123 (82.11%), Query Frame = 1 Query: 10 QTLSGTGACRVAGELFARFRGAKS-----PIYIPNPTWGNHVAIFKNSGLDVRRYRYYDPNTLALDFEGLMSDIQSAEDGSLFLLHACAHNPTGVDPTHKQWADMSATMKAKGHVVFFDCAYQ 363 QTLSGTGACRV GEL +F+GAK+ PIY+PNPTWGNH+ IF N+G++VR+YRYYDP T+ LDFEGL++D++ A GS FLLHACAHNPTGVDPT QW +S MKA+GHVVFFDCAYQ Sbjct: 129 QTLSGTGACRVVGELLGKFQGAKAGGGRPPIYVPNPTWGNHIPIFNNAGMEVRKYRYYDPKTVGLDFEGLIADVEQAPKGSAFLLHACAHNPTGVDPTLDQWRQISQAMKAQGHVVFFDCAYQ 251
BLAST of mRNA_H-elongata_contig100900.82.1 vs. uniprot
Match: A0A8K1FEX3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEX3_PYTOL) HSP 1 Score: 191 bits (485), Expect = 7.440e-57 Identity = 83/118 (70.34%), Postives = 98/118 (83.05%), Query Frame = 1 Query: 10 QTLSGTGACRVAGELFARFRGAKSPIYIPNPTWGNHVAIFKNSGLDVRRYRYYDPNTLALDFEGLMSDIQSAEDGSLFLLHACAHNPTGVDPTHKQWADMSATMKAKGHVVFFDCAYQ 363 QT+SGTG R+AGE FARF G +PIY+PNPTWGNH+ I +++GLDVRRY YY+P + LDF GL+SDIQ A DGSLFLLHACAHNPTGVDPT +QW ++S MKAK H+VFFDCAYQ Sbjct: 139 QTISGTGGLRIAGEFFARFLGKDTPIYLPNPTWGNHIPIMRDAGLDVRRYTYYEPASRGLDFTGLLSDIQGAPDGSLFLLHACAHNPTGVDPTFEQWKEISDVMKAKNHIVFFDCAYQ 256
BLAST of mRNA_H-elongata_contig100900.82.1 vs. uniprot
Match: A0A067CVX7_SAPPC (Aspartate aminotransferase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CVX7_SAPPC) HSP 1 Score: 187 bits (475), Expect = 1.300e-55 Identity = 82/118 (69.49%), Postives = 97/118 (82.20%), Query Frame = 1 Query: 10 QTLSGTGACRVAGELFARFRGAKSPIYIPNPTWGNHVAIFKNSGLDVRRYRYYDPNTLALDFEGLMSDIQSAEDGSLFLLHACAHNPTGVDPTHKQWADMSATMKAKGHVVFFDCAYQ 363 QT+SGTG CR+AGE FARF G +PIY+PNPTWGNH+ I K++GLDVRRY Y++P + L+F GLMSDIQ A + S+FLLHACAHNPTGVDPT +QWA +S MK K HVVFFDCAYQ Sbjct: 118 QTISGTGGCRLAGEFFARFLGKNTPIYLPNPTWGNHIPIMKDAGLDVRRYAYFEPASRGLNFSGLMSDIQGAPEKSVFLLHACAHNPTGVDPTKEQWAAISKAMKEKNHVVFFDCAYQ 235 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100900.82.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig100900.82.1 >prot_H-elongata_contig100900.82.1 ID=prot_H-elongata_contig100900.82.1|Name=mRNA_H-elongata_contig100900.82.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp MPPQTLSGTGACRVAGELFARFRGAKSPIYIPNPTWGNHVAIFKNSGLDVback to top mRNA from alignment at H-elongata_contig100900:254..2227+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig100900.82.1 ID=mRNA_H-elongata_contig100900.82.1|Name=mRNA_H-elongata_contig100900.82.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1974bp|location=Sequence derived from alignment at H-elongata_contig100900:254..2227+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig100900:254..2227+ >mRNA_H-elongata_contig100900.82.1 ID=mRNA_H-elongata_contig100900.82.1|Name=mRNA_H-elongata_contig100900.82.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=726bp|location=Sequence derived from alignment at H-elongata_contig100900:254..2227+ (Himanthalia elongata Himel1 dioecious)back to top |