mRNA_H-elongata_contig10086.78.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig10086.78.1 vs. uniprot
Match: D8LRD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD9_ECTSI) HSP 1 Score: 902 bits (2331), Expect = 0.000e+0 Identity = 438/776 (56.44%), Postives = 515/776 (66.37%), Query Frame = 1 Query: 1 FFHQNRCPIGRFCVDGVSFPCPPGRFGASQLSTNSSCTGACRKGHFCPEGSHRADQASTSDIAVGGPVRGDRGVVLSGGVFRTERGQ-----NKETSVLSLSRSSSRVATRTGEALCEPGYWCWGGSRYPCEPGSFGNAFGLTQSNCSGXXXXXXXXXXXXVSPRERPCGDPSVYCPGGNWQPLAVAVGYYSRGGAGATTRIVQEVAPPGSYAKAGLLFLCPPGRYGASHGLSSSLCSGDCFPGFYCRAGSVSPRETACGRADLICPLGSGWPIAVTEGYYTTDYSTIPEQEPCVSGFFRNASFPYNTDLTRGEPSAIVTAIPLPPCQLCPEGTYKAITGDRFDLCRPCEEHAAESIPTRTSCTCRRVRGGAISAEFLYFNITSAKCQSVKANFRPPAETILTESIFTRYDQRECEPGHFCEKGVRFPCPAGRYGASAGENRSECTGSCAAGWFCPVASTSANEFPCGAANVYCRSGVAAPRFVDPGFYTIGGYGVANG-------NIYDSHATVTAGGVVNGGDYQALTRRPDDSQGAAFRSNVALCPAGWYCTGDGGGTECPPGLYGGEAGLSDSACSGICAGGHFCPSGSTSPFQRRCGGVDLYCPVGASAPIEVSVGYYGVHTGPQTVLMAWRDPLNQTHSAQVLCEPGYFCDGGRKEPCPPGTFLWQYGESSRDSCTPCKAGYYCPLQGTAGPSTVSTLVECGNPALFCPAGSVEPTAVRSGFYSVGGGLDGTTRVSQVLCEPGRYCREGLFFLFFCVSFGDSSGLHDEGC 2292 F Q RCP+GR+CV GVS+PCP GRFGAS+LS NSSCTG+C GH+CPEGSHR+DQ + VGG +L V T G N +T+ + S +TR+ E LCEPG+WC G RY CE G++G+ FG T+ NCSG VSP E PCG E++PPGSYA G+L+ CP G +GASHGLSS LCSG C GFYC GSVSPRE CG +CP GSGWPI V G+YTTDY+T+P++E C G FRN S+P++TD TRGE SAI TAIPLPPCQLCPEGT+KA+TGD LC PC+EH AESI RTSC CRR+ GG +SA LYFN T++ CQ+V A+FRP AE L ES FTRY Q ECEPGHFC GVRFPCP GR+GASA E R +C G CA GW+CP S SAN+ PCGAAN+YC + AP FV+ GFYT G + + G + + S + T G V G D A +RPDD +GAAFRS VA+CPAGWYCTGDG G++CPPG+YGGE GLSD ACSG+CA G CP GSTSPFQ +CGG+ GYYG HTG L A RDPLN+THSAQVLCEPG+FC+ GRKEPCP GTF W+YGESSR SC PCKAGYYCP +A PS +TLV CGNP +FCP GSVEP VR+GFYSVGGG +GTTRVSQVLCE G YC++ L ++G S+GL DEGC Sbjct: 214 FSLQFRCPVGRYCVGGVSWPCPAGRFGASELSVNSSCTGSCGPGHYCPEGSHRSDQVNEGHYTVGGDA-----TLLMEAVITTTAGTIAVAGNNQTTAEQVEADPSLTSTRSAERLCEPGFWCEAGFRYLCEAGAYGSDFGATRGNCSGFCEAGFVCRNGSVSPEENPCG----------------------------------ELSPPGSYADQGILYTCPAGVFGASHGLSSPLCSGPCSMGFYCEPGSVSPRERVCGGPSRMCPAGSGWPIMVDSGHYTTDYATVPDEEACPPGMFRNGSYPFDTDPTRGEESAITTAIPLPPCQLCPEGTFKAVTGDSLALCLPCDEHTAESIEARTSCVCRRIAGGDVSATMLYFNTTTSACQNVTASFRPSAEAGLVESTFTRYSQAECEPGHFCVGGVRFPCPGGRFGASAREVRPQCQGECAGGWYCPEGSVSANQVPCGAANLYCPARSIAPTFVESGFYTTGNHDASYGLHTPGTASAFPSSDSGTTG--VGGRDEGAGAKRPDDDRGAAFRSGVAVCPAGWYCTGDGAGSKCPPGVYGGEVGLSDPACSGVCAAGFVCPEGSTSPFQSKCGGLXXXXXXXXXXXXXXXXGYYGAHTGVDAGLQAARDPLNETHSAQVLCEPGFFCEKGRKEPCPAGTFQWKYGESSRGSCLPCKAGYYCPPGESASPSRDATLVACGNPTVFCPEGSVEPVPVRAGFYSVGGGSEGTTRVSQVLCEAGYYCQDAARKLCPAGTYGSSAGLRDEGC 948
BLAST of mRNA_H-elongata_contig10086.78.1 vs. uniprot
Match: A0A6H5JG60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG60_9PHAE) HSP 1 Score: 803 bits (2075), Expect = 9.880e-280 Identity = 422/844 (50.00%), Postives = 494/844 (58.53%), Query Frame = 1 Query: 136 FCPEGSHRADQASTSDIAVGGPVRGDRGVVLSGGVFRTERGQNKETSVLSLSRSSSRVATRTGEALCEPGYWCWGGSRYPCEPGSFGNAFGLTQSNCSGXXXXXXXXXXXXVSPRERPCGDPSVYCPGGNWQPLAVAVGYYSRGGAGATTRIVQEVAPPGSYAKAGLLFLCPPGRYGASHGLSSSLCSGDCFPGFYCRAGSVSPRETACGRADLICPLGSGWPIAVTEGYYTTDYSTIPEQEPCVSGFFRNASFPYNT-------------DL---------------------TRGEPSAIVTAIPLPPCQLCPEGTYKAITGDRFDLCRPCEEHAAESIPTRTSCTCRRVRGGAISAEFLYFNITSAKCQSVKANFRPPAETILTESIFTRYDQRECEPGHFCEKGVRFPCPAGRYGASAGENRSECTGSCAAGWFCPVASTSANEFPCGAANVYCRSGVAAPRFVDPGFYTIGGYGVANG-------NIYDSHATVTAGGVVNGGDYQALTRRPDDSQGAAFRSNVALCPAGWYCTGDGGGTECPPGLYGGEAG--------------------------------------LSDSACSGICAGGHFCPSGSTSPFQRRCGGVDLYCPVGASAPIEVSVGYYGVHTGPQTVLMAWRDPLNQTHSAQVLCEPGYFCDGGRKEPCPPGTFLWQYGESSRDSCTPCK---------------AGYYCPLQGTAGPSTVSTLVECGNPALFCPAGSVEPTAVRSGFYSVGGGLDGTTRVSQ-------------------------------VLCEPGRYCREGLFFLFFCVSFGDSSGLHDEGC 2292 FCPEGS A + + VGG V++ N ET+ + S +TR+ E LCEPG+WC G RYPCE G++G+ FG TQ +CSG VSP E PCGD SVYCP N +P+ V+VGYYS GG+G TTR QE++PPGSYA G+L+ CP G +GASHGLSS LCSG C GFYC GSVS RE ACG +CP GSGWPI V GYYTTDY+T+P++E C G FRN S+P++T DL T+GE SAI TAIPLP CQLCPEGT+KA+TGD LC PC+E AESI RTSC CRR+ GG +SA LYFN T++ CQ+V A+FRP AE L ES FTRY Q ECEPGHFC GVRFPCP GR+GASA E R +C G CA GW+CP S SAN+ PCGAAN+ AP FV+ GFYT G + + G + + S T G V G D A +RPDD +GAAFRS VA+CPAGWYCTGDG G++CPPG+YGGE G LSD ACSG+CA G CP GSTSPFQ RCGG+ V VGYYG HTG L A RDPLN+THSAQVLCEPG+FC+ GRKEPCP GTF W+YGESSR SC PCK AGYYCP +A PS + LV CGNP +FCP GSVEP VR+GFYSVGGG +G TRVSQ VLCE G YC++ L ++G S+GL DEGC Sbjct: 26 FCPEGSSTASKVNEGHYTVGGDATLLMEAVITTTADTIAVAGNNETTAEQVEADPSLTSTRSAERLCEPGFWCEAGFRYPCEAGTYGSDFGATQGSCSGFCEAGFVCRNGSVSPEENPCGDSSVYCPWANSEPVKVSVGYYSVGGSGPTTRTGQELSPPGSYADQGILYTCPAGVFGASHGLSSPLCSGPCSMGFYCEPGSVSSRERACGGPSQMCPAGSGWPIMVDSGYYTTDYATVPDEEACPPGMFRNGSYPFDTGEKIRRLGMLGDLDLFRRMGRGGRLAEFSALKYHYQTKGEESAITTAIPLPSCQLCPEGTFKAVTGDSLALCLPCDELTAESIEARTSCVCRRMAGGDVSAIMLYFNTTTSACQNVTASFRPSAEVGLVESTFTRYSQAECEPGHFCVGGVRFPCPGGRFGASAREIRPQCQGECAGGWYCPEGSVSANQVPCGAANLXXXXXXIAPTFVEQGFYTTGNHDASYGLHTPGAASAFPSSDFGTTG--VGGRDEGAGAKRPDDDRGAAFRSGVAVCPAGWYCTGDGAGSKCPPGVYGGEVGGRENAREGCSNDVHRRLVTGAGVWWGRQEGGVEQGLVGLSDPACSGVCAAGFVCPEGSTSPFQSRCGGLXXXXXXXXXXXXXVLVGYYGAHTGVAAGLQAARDPLNETHSAQVLCEPGFFCEKGRKEPCPAGTFQWKYGESSRASCLPCKPPNPRLLPDVAMNTKAGYYCPPGESASPSLAAALVACGNPTVFCPEGSVEPVPVRAGFYSVGGGSEGNTRVSQASTTQLAPLLLRCPTRCLARHCLIISNSRSKVLCEAGYYCQDAARKLCPAGTYGSSAGLRDEGC 867
BLAST of mRNA_H-elongata_contig10086.78.1 vs. uniprot
Match: A0A5D6XLS4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLS4_9STRA) HSP 1 Score: 417 bits (1071), Expect = 1.110e-129 Identity = 278/788 (35.28%), Postives = 357/788 (45.30%), Query Frame = 1 Query: 10 QNRCPIGRFCV-DGVSFPCPPGRFGASQLSTNSSCTGACRKGHFCPEGSHRADQASTSDIAVGGPVRGDRGVVLSGGVFRTERGQNKETSVLSLSRSSSRVATRTGEALCEPGYWCWGGSRYPCEPGSFGNAFGLTQSNCSGXXXXXXXXXXXXVSPRERPCGDPSVYCPGGNWQPLAVAVGY--YSRGG------AGATTRIVQEVAPPGSYAKAGLLFLCPPGRYGASHGLSSSLCSGDCFPGFYCRAGSVSPRETACGRADLICPLGSGWPIAVTEGYYTTDYSTIPEQEPCVSGFFRNAS---FPYNTDLTRGEPSAIVT----AIPLPPCQLCPEGTYKAITGDRFDLCRPCEEHAAESIPTRTSCTCRRVRGG----AISAEFLYFNITSAKCQSVKANFRPPAETILTESIFTRYDQRECEPGHFCEKGVRFPCPAGRYGASAGENRSECTGSCAAGWFCPVASTSANEFPCGAANVYCRSGVAAPRFVDPGFYTIGGYGVANGNIYDSHATVTAGGVVNGGDYQALTRRPDDSQGAAFRSNVALCPAGWYCTGDGGGTECPPGLYGGEAGLSDSACSGICAGGHFCPSGSTSPFQRRCGGVDLYCPVGASAPIEVSVGYYGVHTGPQTVLMAWRDPLNQTHSAQVLCEPGYFCDGGRKEPCPPGTFLWQYGESSRDSCTPCKAGYYCPLQGTAGPSTVSTLVECGNPALFCPAGSVE-PTAVRSGFYSVGGGLDG------TTRVSQVLCEPGRYCREGLFFLFFCVSFGDSSGLHDEGC 2292 Q CP+G FCV DG + CP G FG + T S C G C GHFCP G SSS G A PC G+FGN FGL +CSG ++ CG +CP G+ P A GY + GG AGA TR Q +A PG +A G+ F CP G +G G + CSG C G++C GS SP E CG AD CP P++V GYYT+ +++ C G+FR+ S F D G V+ + PL C CP GT+K++ GD LC C S R +C C R GG + L FN + C+ + A SIF + Q CE G +C+ GVR PCP GRYG+S+ E S C+G+CAAG++CP+AST++ CG ANV+C +G A P V PG+Y+ ++ S ++ GV Y AL ++ R A C AG++C G G CP G YG G + S C G++CP GS SP QR CGG D+ C G+ P+ V+ GYY V N T Q++CEPGYFC GG K CP GTF G C AGYYCP PS +T +ECG+ ++CP G+ P AVR GFY+VG G DG TTR Q +C G YCR G+ ++GD GL D C Sbjct: 118 QLACPVGSFCVGDGGAEFCPGGTFGNASGLTTSECAGRCAGGHFCPRG------------------------------------------------SSSATPNSCGGAHVYXXXXXXXXXXVPCPAGTFGNVFGLAMQDCSGLCREGFYCPEGSITDSAFQCGSSDRFCPTGSPAPTKAAAGYCTVNSGGTALASDAGALTRSAQRIAVPGEFAWRGVCFKCPAGTFGVMEGEVNPRCSGKCARGYFCPPGSTSPLEKECGDADKYCPEAMDAPLSVQVGYYTSKQ----DEDMCPPGWFRDVSTTTFNNFVDAVTGSSPISVSYGDFSFPLGKCVKCPLGTFKSLPGDDVALCVLCPAFTTRSSLDRRTCECFRRAGGLPVDTPAVLELRFNAATLACEQIPLGRARYAPAEANASIFAKAQQLPCERGFYCQAGVRSPCPGGRYGSSSKETSSTCSGACAAGYYCPLASTNSAMRVCGNANVFCPAGSAVPTPVLPGYYS------TRSSLTGSQQLLSGAGVAL--RYAALHANVNEE----VRDAQAQCEAGYFCVG-GRKFICPGGRYGDRVGET----SPFCQRGYYCPPGSISPTQRECGGSDVICYTGSPLPVAVASGYYSVGGS------------NATRVHQLVCEPGYFCLGGVKYQCPEGTFGATSGLRDATCSGLCAAGYYCPSYPRL-PSVRATQLECGSSTVYCPVGTGNRPMAVRRGFYTVGAG-DGSGDAKNTTRTGQTVCPKGFYCRRGVMIRCPDGTYGDDEGLSDPYC 822
BLAST of mRNA_H-elongata_contig10086.78.1 vs. uniprot
Match: A0A2D4BTE1_PYTIN (Cellulose synthase 3 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTE1_PYTIN) HSP 1 Score: 406 bits (1043), Expect = 1.290e-119 Identity = 264/680 (38.82%), Postives = 329/680 (48.38%), Query Frame = 1 Query: 334 CEPGYWCWGGSRYPCEPGSFGNAFGLTQSNCSGXXXXXXXXXXXXVSPRERPCGDPSVYCPGGNWQPLAVAVGYYSRGGAGA-----TTRIVQEVAPPGSYAKAGLLFLCPPGRYGASHGLSSSLCSGDCFPGFYCRAGSVSPRETACGRADLICPLGSGWPIAVTEGYYTTDYSTIPEQEPCVSGFFRNASFPYNT--DLTRGEPSAIV----TAIPLPPCQLCPEGTYKAITGDRFDLCRPCEEHAAESIPTRTSCTCRRVRGGAI---SAEFLYFNITSAKCQSVKANFRPPAETILTESIFTRYDQRECEPGHFCEKGVRFPCPAGRYGASAGENRSECTGSCAAGWFCPVASTSANEFPCGAANVYCRSGVAAPRFVDPGFYTIGGYGVANGNIYDSHATVTAGGVVNGGDYQALTRRPDDSQGAAFRSNVALCPAGWYCTGDGGGTECPPGLYGGEAGLSDSACSGICAGGHFCPSGSTSPFQRRCGGVDLYCPVGASAPIEVSVGYYGVHTGPQTVLMAWRDPLNQTHSAQVLCEPGYFCDGGRKEPCPPGTFLWQYGESSRDSCTPCKAGYYCPLQGTAGPSTVSTLVECGNPALFCPAGSVE-PTAVRSGFYSVGGG----LDGT--------TRVSQVLCEPGRYCREGLFFLFFCVSFGDSSGLHDEGC 2292 C+PG++C G R C G+ G FGL CSG R CG + P VA GY S AGA +TR Q +A PG YA G + CPPG YGA G + CSG C PG++C AGS E CG A + CP SG P+ V G+YT+ I QE C G FR+ + + D+ G V T PL C LCP+GT+KA GD LC C + S R SC C R+ GG S+ L+F+ T+ C ++ P A S+ TR Q C+PG++C +GVR PCPAG Y ++ E R +C G CA G+FCP+AST++ CG A+VYC G P V PG+YTI S A G VV Y AL ++ A R C G++C G CP G YG +AG + C+G+C G FCP GSTSP Q+RCGG D C G+ P V GYY V A DP N T Q CEPG+FC G K CP GTF G S+ C+AGY CP A PST +T CGN ++FCP G+ P V SGFYS G G +GT TR Q LC G YCR+G+ ++GD GL C Sbjct: 1147 CDPGHYCINGVRIACPGGTVGATFGLDTPLCSGPCPTGFFCPEGTTVGTSRQCGTSEFXXXXXSAAPQRVAPGYCSISTAGALSNSASTRSAQRIAVPGEYAWKGTCYQCPPGTYGARSGETDPRCSGACLPGYFCPAGSSRATEKECGSAAVFCPAASGLPVPVDPGFYTS----IDTQELCPPGRFRDVTTTTSRFIDIATGRSPLTVNYGETLYPLATCSLCPDGTFKATPGDDPALCLTCPLLLSVSSSDRRSCDCYRLPGGGAFDRSSFQLFFDGTT--CVLRPRDWVPEAPLAANNSVMTRARQLPCDPGYYCVQGVRRPCPAGTYSSAPQETRPQCAGRCAPGYFCPLASTNSTAQRCGDASVYCPEGSGVPTPVLPGYYTI--------RSLTSQALSPVGSVV----YNALNATSNE----AIRDAQQRCEPGYFCA-MGRKFICPGGRYGDQAGETSPLCAGLCRRGFFCPPGSTSPTQQRCGGGDRVCRTGSERPQIVPPGYYSVG--------AAADPTNSTRFHQRPCEPGFFCVNGTKFQCPEGTFGATTGLSTAACSGRCRAGYRCPSYPFA-PSTSATQELCGNASVFCPEGTGNAPRLVASGFYSTGAGDGSDQEGTPEAAQTNATRTDQALCPRGFYCRQGIRIRCPPGTYGDREGLVSTQC 1794
BLAST of mRNA_H-elongata_contig10086.78.1 vs. uniprot
Match: A0A067CFK3_SAPPC (Ephrin_rec_like domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CFK3_SAPPC) HSP 1 Score: 348 bits (893), Expect = 8.440e-105 Identity = 259/792 (32.70%), Postives = 341/792 (43.06%), Query Frame = 1 Query: 13 NRCPIGRFCVDGVSFPCPPGRFGASQLSTNSSCTGACRK-----------------GHFCPEGSHRADQASTSDIAVGGPVRGDRGVVLSGGVFRTERGQNKETSVLSLSRSSSRVATRTGEALCEPGYWCWGGSRYPCEPGSFGNAFGLTQSNCSGXXXXXXXXXXXXVSPRERPCGDPSVYCPGGNWQPLAVAVGYYSRGGAGATTRIVQEVAPPGSYAKAGLLFLCPPGRYGASHGLSSSLCSGDCFPGFYCRAGSVSPRETACGRADLICPLGSGWPIAVTEGYY---TTDYSTIPEQEPCVSGFFRNASFPYNTDLTRGEPSAIV----TAIPLPPCQLCPEGTYKAITGDRFDLCRPCEEHAAESIPTRTSCTCRRVRGGAI---SAEFLYFNITSAKCQSVKANFRPPAETILTESIFTRYDQRECEPGHFCEKGVRFPCPAGRYGASAGENRSECTGSCAAGWFCPVASTSANEFPCGAANVYCRSGVAAPRFVDPGFYTIGGYGVANGNIYDSHATVTAGGVVNGGDYQALTRRPDDSQGAAFRSNVALCPAGWYCTGDGGGTECPPGLYGGEAGLSDSACSGICAGGHFCPSGSTSPFQRRCGGVDLYCPVGASAPIEVSVGYY-GVHTGPQTVLMAWRDPLNQTHSAQVLCEPGYFCDGGRKEPCPPGTFLWQYG---ESSRDSCTP-CKAGYYCPLQGTAGPSTVSTLVECGNPALFCPAGSVEPTAVRSGFYSVGGGLDGTTRVSQVLCEPGRYCREGLFFLFFCVSFGDSSGLHDEGC 2292 RCP G +CV G +FPCP GRFGA++ +S C+ A FCP S+ + ++ P+ +A+CEPG++C G R PC G+FG+AFGLT CSG + CG P YCP G+ P +A GY G ATT+ Q +APPGS+A G + CP G YG G S CSG C PG+YC GS SP + C TTD C G +R+AS L G + V P PC CP GT+K GD LC C + S RT+CTC RV GGA + LYF+ C + + + + S +T+ + CEPG++C +G R PCPAGRYG S E CT +C G +CPVAS PCGA +YC SG P V G+Y++ DS + G + LTRR D+Q A C G +C G CP G YG A + S C+G+C G +CP GST P Q CG + C G++ P V+VGYY G T P L RD + Q+ C G +C G PCP GT YG + +R +C+ C GYYCP A S CGN ++ AV G+Y+ GG +TR Q LC G +C+ G+ + ++G ++GL E C Sbjct: 34 TRCPPGSYCVYGQAFPCPVGRFGATEGLNSSRCSDAXXXXXXXXXXXXXXMPCSDPASFCPAESYALHHVGVGNYSI--PLDSQY---------------------------------HNDQAVCEPGHYCIDGVRSPCPAGTFGSAFGLTTPACSGQCAPGYHCPQGSLLATANECGSPHTYCPEGSPHPQFIASGYCGVG-TSATTQAAQALAPPGSFALEGQCYSCPGGSYGTDPGSISPTCSGVCAPGYYCPPGSTSPFQVTCXXXXXXXXXXXXXXXXXXXXXXXXXTTD--------ACGPGLYRSASTSLAALLLAGWSAIAVDYGDALFPYAPCVPCPLGTFKPDQGDDQSLCLACPLFTSTSSIDRTTCTCYRVSGGAAWDATTTALYFD--GVDCIDLPVSTQM-VSLLAPNSSWTKDREAACEPGYYCVQGAREPCPAGRYGTSWKETNPLCTDACRRGHYCPVASAHDAMKPCGAPYLYCPSGSPYPVAVTAGYYSL-----------DSIS----------GLFSDLTRR--DAQ--------APCEPGAFCK-YGLQYPCPGGRYGSAAQETSSLCTGLCQRGFYCPPGSTRPTQVACGNASVICRRGSAVPEPVAVGYYSGGDTSPTEALD--RDSMRWY---QLPCPLGSYCVDGTSFPCPGGT----YGGVTQLTRPTCSGLCAPGYYCPPGSVA-----SQAFSCGNVSVXXXXXXXXXLAVSVGYYTTGG--TNSTRSGQALCPIGSFCQHGVLYQCPSGTYGSTTGLTVETC 730
BLAST of mRNA_H-elongata_contig10086.78.1 vs. uniprot
Match: B5YNG8_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNG8_THAPS) HSP 1 Score: 342 bits (877), Expect = 3.970e-103 Identity = 218/684 (31.87%), Postives = 308/684 (45.03%), Query Frame = 1 Query: 322 GEALCEPGYWCWGGSRYPCEPGSFGNAFGLTQSNCSGXXXXXXXXXXXXVSPRERPCGDPSVYCPGGNWQPLAVAVGYYSRGGAGATTRIVQEVAPPGSYAKAGLLFLCPPGRYGASHGLSSSLCSGDCFPGFYCRAGSVSPRETACGRADLICPLGSGWPIAVTEGYYTT-DYSTIPEQEPCVSGFFRNASFPYNTDLTRGEPSAIVTAIPLPPCQLCPEGTYKAITGDRFDLCRPCEEHAAESIPTRTSCTCRRVRGGAISAEFLYFNITSAKCQSVKAN-FRPPAETILTESIFTRYDQRECEPGHFCEKGVRFPCPAGRYGASAGENRSECTGSCAAGWFCPVASTSANEFPCGAANVYCRSGVAAPRFVDPGFYTIGGYGVANGNIYDSHATVTAGGVVNGGDYQALTRRPDDSQGAAFRSNVALCPAGWYCTG-DGGGTECPPGLYGGEAGLSDSACSGICAGGHFCPSGSTSPFQRRCGGVDLYCPVGASAPIEVSVGYYGVHTGPQTVLMAWRDPLNQTHSAQVLCEPGYFCDGGRK---------------------EPCPPGTFLWQYGESSRDSCTPCKAGYYCPLQGTAGPSTVSTLVECGNPALFCPAGSVEPTAVRSGFYSVGGGLDGT--------TRVSQVLCEPGRYCREGLFFLFFCVSFGDSSGL 2277 G+ +CE G +C GG ++PC G + G+T +PRE CGDPS YC G+ +P V GY+S GG TR Q AP G YAK G+LF C G YG L++ CSG C G+YC GS S R+ CG A P V +GYYTT D + C G +R ++ + S I T + C LCP+ T+K + G + C+PC HA + P R +C C + +S + L+F++ + C + + +PP ++S + ++ CEPG +C+ G+R+ CP GRYG E EC+G+C G +C STS + CG NVYC AP++V G+Y+ +S+ R+++ LC G+YC G DG C G +G G S + C G C G++CP GSTSP Q CG + V GYY + ++ P N T Q+ CE GY+C G K CP G+F S +SC C+AGYYCP GP+T T++ CG L+CP GS P + G+Y + G +G RV+QV+C PG YC G + ++G+ L Sbjct: 27 GQQICEAGSYCVGGVKHPCPKGYYCPDLGMT-------------------TPRE--CGDPSKYCKEGSTEPSNVREGYFSLGGTN-ITRYNQTFAPLGHYAKGGVLFKCAEGHYGDKVALTTDECSGLCEEGWYCPTGSTSQRQIVCGGAHHFXXXXXXXPQKVQDGYYTTKDQIAL-----CGPGQYRK----FDGEEVHTNTSPIATKVQKGDCVLCPDETFKIVEGAYVEQCQPCGPHA-KGTPDRMTCECHQSATDRLSTK-LHFDVKTKTCVDITGDEMKPPDIQYYSDSRVAKVEEFPCEPGFYCQDGLRYSCPDGRYGDKHLETNFECSGTCNEGHWCGRESTSPTQNKCGGTNVYCPPKSPAPQYVPEGYYS------------------------------------SESEPYDMRTSIHLCSPGFYCDGHDGLRKPCRSGYFGNSTGSSKAVCDGKCRAGYYCPEGSTSPTQVPCGNASVIXXXXXXXXXXVLTGYYSASEHDILLESSYSGP-NSTQDTQLECEVGYYCKDGIKIVVHGLLINVFVASPLLVNSQYQCPGGSFGRYERTSDVNSCEECRAGYYCPSYPN-GPTTEDTMMPCGESFLYCPPGSAFPRGIDVGYYGISPGYEGADESDDTMMNRVAQVICPPGHYCEAGFRYKCRPGTYGEVEAL 639
BLAST of mRNA_H-elongata_contig10086.78.1 vs. uniprot
Match: A0A835Z6D3_9STRA (TNFR-Cys domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6D3_9STRA) HSP 1 Score: 337 bits (863), Expect = 5.970e-103 Identity = 191/514 (37.16%), Postives = 253/514 (49.22%), Query Frame = 1 Query: 922 GEPSAIVTAIPLPPCQLCPEGTYKAITGDRFDLCRPCEEHAAESIPTRTSCTCRRVRGGAISAEFLYFNITSAKCQS-VKANFRPPAETILTESIFTRYDQRECEPGHFCE-------------------KGVRFPCPAGRYGASAGENRSECTGSCAAGWFCPVASTSANEFPCGAANVYCRSGVAAPRFVDPGFYTIGGYGVANGNIYDSHATVTAGGVVNGGDYQALTRRPDDSQGAAFRSNVALCPAGWYCTGDGGGTECPPGLYGGEAGLSDSACSGICAGGHFCPSGSTSPFQRRCGGVDLYCPVGASAPIEVSVGYYGVHTGPQTVLMAWRDPLNQTHSAQVLCEPGYFCDGGRK-------------EP----CPPGTFLWQYGESSRDSCTPCKAGYYCPLQGTAGPSTVSTLVECGNPALFCPAGSVEPTAVRS---------------GFYSVG---GGLD--GTTRVSQVLCEPGRYCREGLFFLFFCVSFGDSSGLHDEGC 2292 G+ V + P+ PC+LCP TYKA GD LCR C + I RTSC C RV GGA L+FN T+ +C+ + ++ PP E L ++ TR+ Q CEPG +C +GVR+PCPAGRYG GE +C+GSC G++CP AS ++ PCG+ + YC +G AAP V G++T+ + AA RS A+CP G +C GDG C PG +GG GLS +AC+G C G+ C + S + R CGG +YC G++ P GYY + G Q L+ DPLN T +AQ+LC PGY+C GG K EP CPPGT+ W+YG C PC AGY+CP A P+ ECG P ++CP GS EP V+ G+YS G GLD G TR +Q CEPG YCR G+ ++G ++GL+ C Sbjct: 18 GDAWGAVDSFPITPCELCPNATYKAAGGDDVALCRACPWRTSVGIANRTSCACYRVAGGATGFTSLFFNTTTGECEGRQETHYAPPPELSLDGTVLTRWQQARCEPGFYCVGGVRRVAMGVQGRLGMRVFEGVRYPCPAGRYGNRQGETSPQCSGSCDPGFYCPPASATSTAEPCGSTDRYCPAGSAAPVAVAAGYFTV------------------------------------EDATAAVRSAQAVCPRGHWCPGDGLRHACAPGRHGGALGLSAAACAGACQAGYTCAAASVNATARPCGGTAVYCSEGSAVPTPALDGYYTISAGMQQALVEATDPLNTTRTAQILCGPGYYCTGGAKIAAARSAVDLMRAEPARIKCPPGTYQWRYGAHDVSDCAPCPAGYFCPSY-PAPPTVDPAPFECGGPDVYCPEGSSEPLPVKRRAVSQVPEMLHGCGVGYYSTGVAREGLDDGGATRSAQARCEPGYYCRGGIRTECPAGTYGATTGLNTPRC 494
BLAST of mRNA_H-elongata_contig10086.78.1 vs. uniprot
Match: T0QID9_SAPDV (Ephrin_rec_like domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QID9_SAPDV) HSP 1 Score: 334 bits (857), Expect = 1.060e-97 Identity = 251/788 (31.85%), Postives = 331/788 (42.01%), Query Frame = 1 Query: 13 NRCPIGRFCVDGVSFPCPPGRFGASQLSTNSSCTGACRK-----------------GHFCPEGSHRADQASTSDIAVGGPVRGDRGVVLSGGVFRTERGQNKETSVLSLSRSSSRVATRTGEALCEPGYWCWGGSRYPCEPGSFGNAFGLTQSNCSGXXXXXXXXXXXXVSPRERPCGDPSVYCPGGNWQPLAVAVGYYSRGGAGATTRIVQEVAPPGSYAKAGLLFLCPPGRYGASHGLSSSLCSGDCFPGFYCRAGSVSPRETACGRADLICPLGSGWPIAVTEGYYTTDYSTIPEQEPCVSGFFRNASFPYNTDLTRGEPSAIV----TAIPLPPCQLCPEGTYKAITGDRFDLCRPCEEHAAESIPTRTSCTCRRVRGGAI---SAEFLYFNITSAKCQSVKANFRPPAETILTESIFTRYDQRECEPGHFCEKGVRFPCPAGRYGASAGENRSECTGSCAAGWFCPVASTSANEFPCGAANVYCRSGVAAPRFVDPGFYTIGGYGVANGNIY--DSHATVTAGGVVN--------GGDYQALTRR----------------PDDS---------------QGAAFRSNVAL-----------------CPAGWYCTGDGGGTECPPGLYGGEAGLSDSACSGICAGGHFCPSGSTSPFQRRCGGVDLYCPVGASAPIEVSVGYYGVHTGPQTVLMAWRDPLNQTHSAQVLCEPGYFCDGGRKEPCPPGTFLWQYGESSRDSCTPCKAGYYCP---LQGTA---GPSTVSTLVECGNPALFCPA 2112 RCP G +CV G +FPCP GRFGA++ +S C+G FCP +D + + VG N + + SL +A+CEPG++C G R PC G+FG+AFGLT CSG + CG P YCP G+ +PL V+ GY G A ATT+ Q +APPGS+A G +LCP G YG G S CSG C G+YC GS SP + I + C G +R+AS L G + V P PC CP GT+K GD LC+ C + S RT+C+C R+ GGA + LYF+ + + A + + +T+Y + C+PG++C +G R PCPAGR+G S E CT +C G +CPVAS PCGA +YC SG P V GFY++ +I D+ A G GG Y + + P S +G+A VA+ CP G YC DG CP G YGG L+ CSG+CA G++CP+GS + CG V +YCP G+ P+ VSVGYY TG N T S Q LC G FC G CPPGTF G + C AG++CP + TA GPS+ S ++ + CPA Sbjct: 255 TRCPPGSYCVYGKAFPCPVGRFGATEGLNSSRCSGVXXXXXXXXXXXXXXSPCSDAAFFCP-----SDSYALQPVGVG----------------------NYSSPIDSLYHKD--------QAVCEPGHYCLNGLRSPCPAGAFGSAFGLTTPACSGQCAPGYYCPQGSLGATANECGSPHTYCPEGSPRPLFVSSGYCGVG-ASATTQAAQALAPPGSFAFEGQCYLCPGGYYGTDPGSISPTCSGVCASGYYCPPGSTSPFQVTXXXXXXXXXX-----XXXXXXXXXXXXXXIATTDTCGPGLYRSASTSLAALLLAGWSTIAVDYGDALFPFAPCVPCPLGTFKPDDGDSQSLCQACPPFTSTSSIDRTTCSCYRLSGGATWEATTTALYFDGVTCIHLPIATQM---ASLLPPNTSWTKYQEAACKPGYYCVQGARSPCPAGRFGTSWKETNPLCTNACRRGHYCPVASAHDAVEPCGAPYLYCPSGSPYPVAVTAGFYSLDSVAGLFSDITRRDAQAPCEPGSFCQYGLRYPCPGGRYGSAAQETSTLCTGLCQRGFYCPPGSSLPTQVACGNASVICRRGSASPEPVAVGYYSGGDTSPMRWYQLPCPLGSYCV-DGTSFLCPGGTYGGVPQLTRPTCSGLCAPGYYCPTGSIAAQAFPCGNVSVYCPPGSPQPLAVSVGYYT--TGG----------TNSTRSGQALCPMGSFCQHGVLYQCPPGTFGSATGLTVETCSGWCSAGFFCPPGTVSATANACGPSSYS--IDGQGECMACPA 983
BLAST of mRNA_H-elongata_contig10086.78.1 vs. uniprot
Match: A0A7S3M821_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M821_9STRA) HSP 1 Score: 311 bits (796), Expect = 3.550e-93 Identity = 190/467 (40.69%), Postives = 253/467 (54.18%), Query Frame = 1 Query: 10 QNRCPIGRFCV-DGVSFPCPPGRFGASQLSTNSSCTGACRKGHFCPEGSHRADQASTSDIAVGGPVRGDRGVVLSGGVFRTERGQNKETSVLSLSRSSSRVATRTGEALCEPGYWCWGGSRYPCEPGSFGNAFGLTQSNCSGXXXXXXXXXXXXVSPRERPCGDPSVYCPGGNWQPLAVAVGYYSRGGAGATTRIVQEVAPPGSYAKAGLLFLCPPGRYGASHGLSSSLCSGDC-FPGFYCRAGSVSPRETACGRADLICPLGSGWPIAVTEGYYTTDYSTIPEQEPCVSGFFRNAS-FPYNTDLTRGEPSAIVTAIPLPPCQLCPEGTYKAITGDRFDLCRPCEEHAAESIPTRTSCTCRRVRGGAISAEFLYFNITSAKCQSVKANFRP--PAETILTESIFTRYDQRECEPGHFCEKGVRFPCPAGRYGASAGENRSECTGSCAAGWFCPVASTSANEFPCGAA 1395 Q C G +C+ DG+ CP GR+G+++ ++ SC+G C G++C EGS S GG R G QN ++ + A + E CEPG++C G + C PG++G FGL ++NCSG XXXXXX +SP E+ CGD YCPGGN+QP+ V GYYS GG +TR Q++APPG YA G+L++CP G YGA+ GLS++ CSG C PG+YC AGS+SP CG D+ CP + PI V G+YT DY E C G +RN + F + D T P A+PL CQLCP GTYK+I+GD F C CE + S R +C C G ++F NI+S CQ + P A L + TR Q C+ GH+C +G+R+ CP G YGA E R C G C G++C +STS +PCG A Sbjct: 111 QAICEKGYYCLSDGIKRKCPVGRYGSTRGLSSPSCSGYCAAGYYCEEGSE-----SERQYPCGGADR----FCPPGSTIA----QNVHVGYYTVQLVDNNPALASAERRCEPGFYCSEGVKALCAPGTWGGEFGLHRANCSGVCXXXXXXPEGSISPIEKRCGDADKYCPGGNFQPVMVEEGYYSVGG-NVSTRTGQQIAPPGHYAFNGILYVCPAGFYGATSGLSTATCSGPCSVPGYYCPAGSISPVMRYCGGDDVFCPPYTVAPIRVHSGFYTADYI----YEVCPPGQWRNLTKFGASNDPTGYSPIVSQQALPL--CQLCPNGTYKSISGDYFHQCLSCEAVQSVSSADRITCDCLTAWGEGFISQF---NISSGLCQKYHTSEIPLIDASQWLANTSLTRSRQMPCDAGHYCAEGLRYKCPRGYYGALTQETRPFCEGVCTQGYYCLESSTSPTSYPCGGA 554
BLAST of mRNA_H-elongata_contig10086.78.1 vs. uniprot
Match: A0A1V9ZD70_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZD70_9STRA) HSP 1 Score: 320 bits (819), Expect = 1.920e-92 Identity = 241/737 (32.70%), Postives = 343/737 (46.54%), Query Frame = 1 Query: 106 SCTGACRKGHFCPEGSHRADQASTSDIAVGGPVRGDRGVVLSGGVFRTERGQNKETSVLSLSRSSSRVATRTGEALCEPGYWCWGGSRYPCEPGSFGNAFGLTQSNCSGXXXXXXXXXXXXVSPRERPCGDPSVYCPGGNWQPLAVAVGYYSRGGAGATTRIVQEVAPPGSYAKAGLLFLCPPGRYGASHGLSSSLCSGDCFPGFYCRAGSVSPRETACGRADLICPLGSGWPIAVTEGYYTTDYSTIPEQEPCVSGFFRNASFPYNTDLTRGEPSAIVT----AIPLPPCQLCPEGTYKAITGDRFDLCRPCEEHAAESIPTRTSCTCRRVRGGAI---SAEFLYFNITSAKCQSVKANFRPPAETILTESIFTRYDQRECEPGHFCEKGVRFPCPAGRYGASAGENRSECTGSCAAGWFCPVASTSANEFPCGAANVYCRSGVAAPRFVDPGFYTIGGYGVANGNIYDSHATVTAGGVVNGGDYQALTRRPDDSQGAAFRSNVALCPAGWYCTGDGGGTECPPGLYGGEAGLSDSACSGICAGGHFCPSGSTSPFQRRCGGVDLYCPVGASAPIEVSVGYYGVHTGPQTVLMAWRDPLNQTHSAQVLCEPGYFCDGGRKEPCPPGTFLWQYGESSRDSCTPCKAGYYCPLQGTAGPSTVSTL-VECGNPALFCPAGSVEPTAVRSGFYSVGGGLDGTTRVSQVLCEPGRYCREGLFFLFFCVSFGDSSGLHDEGC 2292 SC G C G FCP G+ +D + P+ + +L GV S+ +S +++ + CEPGY+C GG R C PG+FGN FGL+ ++CSG XXXXXXX CGD + QP ++ G +G +TT+ Q +AP GS+A G +LCP G G+ GL S CSG C G++C GS+SP++ C P VT+GYYT I + C G +R+ S ++L + V P C CP GT+K +GD LC+ + + S RT+C C R+ GG +A+ L+F+ + C ++ + + I + +T+Y Q CEPG +C +G +FPCPAG YG + E R C G C AG++CPV S CGA + P V G+Y++ +I ++ T R C G++C G CP G YG + S C+G+C G++CP GSTSP Q CG + C G++ PI VS GYY +G T+L R+ + T Q C G +C G + CP GTF S++ C GYYCP P + S CG ++CPAGS P V+ G+Y++G +TRV Q CE G +C G+ + ++GDS GL DE C Sbjct: 257 SCFGKCPAGSFCPLGT--ITPTPCNDPSNYCPI--NTYTLLPVGVGN-----------YSIPENSQYLSS---QKACEPGYYCTGGIRTLCPPGTFGNDFGLSSASCSGLXXXXXXXPAGSKISTAHECGDXXXXXXXXSSQPQKISKGNCGQG-LSSTTQSSQSIAPAGSFAFEGQCYLCPGGTCGSEVGLISPSCSGICAAGYFCPPGSISPQQNHCXXXXXXXXXXXX-PTHVTQGYYTY----ITTTDSCGPGQYRSPSTSLASNLLTSWSAIQVNYGDALFPFGACVPCPLGTFKPGSGDSAALCQXXXMYTSTSSSDRTTCNCFRLPGGISYDNTAQTLHFD--GSTCSAIPLT-QLVSSLIPANTSYTKYQQMPCEPGFYCVQGGKFPCPAGSYGPNWFETRPLCAGLCQAGYYCPVGSPHNAMISCGAPFLXXXXXXXYPDSVGTGYYSVS-------SILGLNSDPT------------------------LRDIQMPCEPGYFCR-YGLKYPCPGGRYGSAVQETSSLCTGLCRRGYYCPPGSTSPTQIPCGSSSVVCRAGSAYPIAVSSGYY---SGGDTLLTEARN-RDSTRWYQKPCPLGSYCVNGIQYLCPGGTFGGIQALSTKLCSGLCAPGYYCP------PGSFSAQQFACGASNVYCPAGSSLPIPVKVGYYTIGN--INSTRVDQRSCEIGSFCSRGIIYECPSGTYGDSPGLTDETC 922 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10086.78.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10086.78.1 >prot_H-elongata_contig10086.78.1 ID=prot_H-elongata_contig10086.78.1|Name=mRNA_H-elongata_contig10086.78.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=764bp FFHQNRCPIGRFCVDGVSFPCPPGRFGASQLSTNSSCTGACRKGHFCPEGback to top mRNA from alignment at H-elongata_contig10086:2..7978- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10086.78.1 ID=mRNA_H-elongata_contig10086.78.1|Name=mRNA_H-elongata_contig10086.78.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7977bp|location=Sequence derived from alignment at H-elongata_contig10086:2..7978- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10086:2..7978- >mRNA_H-elongata_contig10086.78.1 ID=mRNA_H-elongata_contig10086.78.1|Name=mRNA_H-elongata_contig10086.78.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4584bp|location=Sequence derived from alignment at H-elongata_contig10086:2..7978- (Himanthalia elongata Himel1 dioecious)back to top |