mRNA_H-elongata_contig100662.62.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig100662.62.1 vs. uniprot
Match: A0A6H5JA40_9PHAE (Zpr1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA40_9PHAE) HSP 1 Score: 203 bits (517), Expect = 2.540e-63 Identity = 101/134 (75.37%), Postives = 122/134 (91.04%), Query Frame = 1 Query: 1 QVTFGGELQEKGCHFELKVHSAEDLDRRESCVIKSDYATVTFLELEFEIPPRQRGEITTVEGLLRTSAERLGEAQDLRMEISPEIGAKVAEIIAKLTLMSVGVDEELPFTVVVDDPSGNSFVENLSAPNKDPAL 402 +V FGGELQEKGC FEL V++A+DL+R+ VIKSD+ATVTF E+EF+IPPRQRGE+TT+EGLLRT+AE+LGEAQDLRME SPE+GA++A +IA+LTLMS G+D ELPFT+VV+DPSGNSFVEN SAPNKDPAL Sbjct: 94 EVIFGGELQEKGCIFELTVNNAKDLNRQ---VIKSDFATVTFREMEFQIPPRQRGEVTTIEGLLRTAAEKLGEAQDLRMERSPEVGAQIAGVIARLTLMSTGMDSELPFTMVVEDPSGNSFVENPSAPNKDPAL 224
BLAST of mRNA_H-elongata_contig100662.62.1 vs. uniprot
Match: D8LCC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC8_ECTSI) HSP 1 Score: 206 bits (524), Expect = 3.190e-61 Identity = 103/134 (76.87%), Postives = 121/134 (90.30%), Query Frame = 1 Query: 1 QVTFGGELQEKGCHFELKVHSAEDLDRRESCVIKSDYATVTFLELEFEIPPRQRGEITTVEGLLRTSAERLGEAQDLRMEISPEIGAKVAEIIAKLTLMSVGVDEELPFTVVVDDPSGNSFVENLSAPNKDPAL 402 +V FGGELQEKGC FEL V++AEDL+R+ VIKSD+ATVTF E+EF+IPPRQRGE+TTVEGLLRT+AE+LGEAQDLRME SPE+GA++A +IA+L LMS G+D ELPFT+VVDDPSGNSFVEN SAPNKDPAL Sbjct: 94 EVVFGGELQEKGCIFELTVNNAEDLNRQ---VIKSDFATVTFREMEFQIPPRQRGEVTTVEGLLRTAAEKLGEAQDLRMERSPEVGAQIAGVIARLALMSTGIDSELPFTMVVDDPSGNSFVENPSAPNKDPAL 224
BLAST of mRNA_H-elongata_contig100662.62.1 vs. uniprot
Match: A0A836CEY4_9STRA (ZPR1 zinc-finger domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEY4_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.300e-45 Identity = 89/135 (65.93%), Postives = 104/135 (77.04%), Query Frame = 1 Query: 1 QVTFGGELQEKGCHFELKVHSAEDLDRRESCVIKSDYATVTFLELEFEIPPR-QRGEITTVEGLLRTSAERLGEAQDLRMEISPEIGAKVAEIIAKLTLMSVGVDEELPFTVVVDDPSGNSFVENLSAPNKDPAL 402 QV FGGELQEKGC FEL V S+EDLDR+ +IKSDYA+V F +EFEIPP+ Q+GEITT+EGLL T+AERLG Q R++ P++GA VA II KL + G EELPFTVVVDDPSGNSFVEN AP +DP L Sbjct: 47 QVLFGGELQEKGCRFELTVKSSEDLDRQ---IIKSDYASVAFPGIEFEIPPKTQQGEITTIEGLLSTAAERLGYDQAYRVQTDPDLGAAVANIILKLRALYSG--EELPFTVVVDDPSGNSFVENPKAPARDPCL 176
BLAST of mRNA_H-elongata_contig100662.62.1 vs. uniprot
Match: A0A7S2XY77_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY77_9STRA) HSP 1 Score: 148 bits (373), Expect = 9.500e-40 Identity = 78/135 (57.78%), Postives = 104/135 (77.04%), Query Frame = 1 Query: 1 QVTFGGELQEKGCHFELKVHSAEDLDRRESCVIKSDYATVTFLELEFEIPPR-QRGEITTVEGLLRTSAERLGEAQDLRMEISPEIGAKVAEIIAKLTLMSVGVDEELPFTVVVDDPSGNSFVENLSAPNKDPAL 402 +V FGGE+QEKGC + + EDL+R+ VIKSD+AT+TF EL+FEIP + QRGEITTVEG+L T+A+ LG+ Q RME++PE+G +VAE+IAKL + G + LPFT+++DDP+GNSFVEN AP +DP L Sbjct: 58 EVQFGGEIQEKGCKHTVTLTKPEDLNRQ---VIKSDFATITFPELDFEIPAKTQRGEITTVEGILSTAAKHLGQEQAYRMEVAPEVGMQVAEVIAKLARYASG--DCLPFTLILDDPAGNSFVENPQAPVRDPQL 187
BLAST of mRNA_H-elongata_contig100662.62.1 vs. uniprot
Match: A0A7S2RY09_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RY09_9STRA) HSP 1 Score: 142 bits (358), Expect = 3.670e-37 Identity = 79/135 (58.52%), Postives = 97/135 (71.85%), Query Frame = 1 Query: 1 QVTFGGELQEKGCHFELKVHSAEDLDRRESCVIKSDYATVTFLELEFEIPPR-QRGEITTVEGLLRTSAERLGEAQDLRMEISPEIGAKVAEIIAKLTLMSVGVDEELPFTVVVDDPSGNSFVENLSAPNKDPAL 402 +VTFGGE+QEKGC F L+V SAEDL R+ VIKSD AT+T ++FEIP QRG ++TVEG+L + E L Q+ RME PE+GA VA +IA L L+S G D LPF +VVDDP+GNS+VENL AP DP L Sbjct: 72 EVTFGGEIQEKGCRFVLRVDSAEDLSRQ---VIKSDTATITIPSIQFEIPANSQRGGVSTVEGVLSRARENLQMYQEERMEHQPEVGAAVAGVIASLVLLSTGAD--LPFELVVDDPAGNSYVENLCAPAPDPKL 201
BLAST of mRNA_H-elongata_contig100662.62.1 vs. uniprot
Match: A0A7S2GHT6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GHT6_9STRA) HSP 1 Score: 132 bits (331), Expect = 8.670e-36 Identity = 75/135 (55.56%), Postives = 93/135 (68.89%), Query Frame = 1 Query: 1 QVTFGGELQEKGCHFELKVHSAEDLDRRESCVIKSDYATVTFLELEFEIPPR-QRGEITTVEGLLRTSAERLGEAQDLRMEISPEIGAKVAEIIAKLTLMSVGVDEELPFTVVVDDPSGNSFVENLSAPNKDPAL 402 +VTFGGE+Q KGC +EL V + DLDR+ +IKSD A V LEFEIP + Q+G IT +EG+L T L Q RME PE+GAKVAEIIAKL LMS+G+D +PFT+ VDDPSGNS++E+ DP L Sbjct: 73 EVTFGGEIQAKGCRYELTVLNKSDLDRQ---MIKSDTARVLLPSLEFEIPAQSQKGGITNIEGILSTVLRNLQMYQAERMEQQPEVGAKVAEIIAKLALMSIGMD--VPFTISVDDPSGNSYIESHHVGTTDPQL 202
BLAST of mRNA_H-elongata_contig100662.62.1 vs. uniprot
Match: A0A024GIE5_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GIE5_9STRA) HSP 1 Score: 130 bits (326), Expect = 7.530e-33 Identity = 70/135 (51.85%), Postives = 92/135 (68.15%), Query Frame = 1 Query: 1 QVTFGGELQEKGCHFELKVHSAEDLDRRESCVIKSDYATVTFLELEFEIPPR-QRGEITTVEGLLRTSAERLGEAQDLRMEISPEIGAKVAEIIAKLTLMSVGVDEELPFTVVVDDPSGNSFVENLSAPNKDPAL 402 +V FGG +QEKGC E V +A DL+R+ +IK+D ATV F ELEFEIPP+ QRG I T+EGLL+ + E L Q+ R EI PE AK+ E I KL L++ G+ LPF +++DDP+GNS +EN AP DP + Sbjct: 90 EVQFGGTIQEKGCKIEFHVENASDLNRQ---IIKADTATVFFPELEFEIPPKTQRGTINTIEGLLQKAIENLQMNQEERREIDPETTAKLDEFIQKLALLATGIT--LPFKIIIDDPAGNSHIENPHAPQSDPKM 219
BLAST of mRNA_H-elongata_contig100662.62.1 vs. uniprot
Match: F0WQ42_9STRA (Uncharacterized protein AlNc14C194G8522 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WQ42_9STRA) HSP 1 Score: 125 bits (313), Expect = 4.990e-31 Identity = 69/132 (52.27%), Postives = 90/132 (68.18%), Query Frame = 1 Query: 1 QVTFGGELQEKGCHFELKVHSAEDLDRRESCVIKSDYATVTFLELEFEIPPR-QRGEITTVEGLLRTSAERLGEAQDLRMEISPEIGAKVAEIIAKLTLMSVGVDEELPFTVVVDDPSGNSFVENLSAPNKD 393 +V FGG +QE+GC E V A DL+R+ +IK+D ATV F ELEFEIPP+ QRG I T+EGLL+ + E L Q+ R I PE AK+ E I KL L++ G+ LPFT+V+DDP+GNS +EN +AP D Sbjct: 90 EVQFGGTIQEQGCKIEFVVEKASDLNRQ---IIKADSATVIFPELEFEIPPKTQRGSINTIEGLLQKAIENLQMNQEERRAIDPETTAKLDEFIQKLALLATGIT--LPFTIVMDDPAGNSHIENPNAPQLD 216
BLAST of mRNA_H-elongata_contig100662.62.1 vs. uniprot
Match: H3GG49_PHYRM (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=H3GG49_PHYRM) HSP 1 Score: 122 bits (305), Expect = 1.040e-29 Identity = 71/133 (53.38%), Postives = 88/133 (66.17%), Query Frame = 1 Query: 1 QVTFGGELQEKGCHFELKVHSAEDLDRRESCVIKSDYATVTFLELEFEIPPR-QRGEITTVEGLLRTSAERLGEAQDLRMEISPEIGAKVAEIIAKLTLMSVGVDEELPFTVVVDDPSGNSFVENLSAPNKDP 396 +V FGG++QEKG EL V AEDL+R+ +IK+D V F L+FEIP QRG I T+EG+L+ + E L E QD R EI PE K+ E IAKL LMS G+ LPF +V+DDPSGNS +EN AP DP Sbjct: 149 EVQFGGKVQEKGAKIELDVTDAEDLNRQ---LIKADAGVVYFPALDFEIPRETQRGSINTIEGVLQKAIEDLRENQDHRREIDPETTEKIDEFIAKLALMSAGIT--LPFKIVLDDPSGNSHIENPHAPAADP 276
BLAST of mRNA_H-elongata_contig100662.62.1 vs. uniprot
Match: A0A0D2UAA0_CAPO3 (Zinc finger protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UAA0_CAPO3) HSP 1 Score: 119 bits (299), Expect = 2.680e-29 Identity = 68/135 (50.37%), Postives = 88/135 (65.19%), Query Frame = 1 Query: 1 QVTFGGELQEKGCHFELKVHSAEDLDRRESCVIKSDYATVTFLELEFEIPPR-QRGEITTVEGLLRTSAERLGEAQDLRMEISPEIGAKVAEIIAKLTLMSVGVDEELPFTVVVDDPSGNSFVENLSAPNKDPAL 402 ++ GG +Q +GC ++V + +DL+R V+KSD ATV+ EL FEIP QRG + TVEGLLR S E L +AQ R + PE AKVAE I +L + +D E PFT +VDDP+GNSFVEN AP KDP + Sbjct: 79 EIQSGGVIQPRGCKTSIRVSTRKDLNRE---VVKSDSATVSVPELNFEIPASTQRGVLNTVEGLLRKSIEGLAQAQPQRYMVDPETAAKVAEFIGRLESL---LDCETPFTFIVDDPAGNSFVENPCAPEKDPTM 207 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100662.62.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig100662.62.1 >prot_H-elongata_contig100662.62.1 ID=prot_H-elongata_contig100662.62.1|Name=mRNA_H-elongata_contig100662.62.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp QVTFGGELQEKGCHFELKVHSAEDLDRRESCVIKSDYATVTFLELEFEIPback to top mRNA from alignment at H-elongata_contig100662:115..996- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig100662.62.1 ID=mRNA_H-elongata_contig100662.62.1|Name=mRNA_H-elongata_contig100662.62.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=882bp|location=Sequence derived from alignment at H-elongata_contig100662:115..996- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig100662:115..996- >mRNA_H-elongata_contig100662.62.1 ID=mRNA_H-elongata_contig100662.62.1|Name=mRNA_H-elongata_contig100662.62.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=804bp|location=Sequence derived from alignment at H-elongata_contig100662:115..996- (Himanthalia elongata Himel1 dioecious)back to top |