mRNA_H-elongata_contig10038.39.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig10038.39.1 vs. uniprot
Match: D7FPK0_ECTSI (1,3-beta-glucan synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK0_ECTSI) HSP 1 Score: 702 bits (1813), Expect = 9.670e-230 Identity = 367/463 (79.27%), Postives = 404/463 (87.26%), Query Frame = 3 Query: 747 VAKGRDTGVSQVTGFTAKISMGNGMQASAFSIKALATQLDIFRLLSFHYSSVGGFMNQVLLMTAVYLYVYAKLFIAFDPDFTTTVDVAVLDAISSQFLFQLGFLLILPIPLLLA---GLQRAISTLANILLRLAPLFFIFSAGTNAHYVNSAVMTGQAKYQATGRGFVIAHEDFVQLFPLYLQSHFTPAFELLVVLIVYASFQNSGYFLETFSVYLLCIGLLWTPLVFNPNGLDFTYASQDFGGWVEWMNSPVDDPKKSWLSWYSKELEETRTQLPYNIKIQVIVRRSRLLILVYGFLTAIGEDYEGGIDGDVWPGSAIVGAIILAFVILFMSESWIRSKCCPPKQLQYGARRARIVRLWKLFVLVGAIVGIIVLTTVDILESVKQFFFYVLCVIILIYYVANILVLFTEDALRNVALARIAFWSVHFLTGLVIMVPILFSSFLPLFVDLQTRMLFNEDFSER 2126 V+KGRDTGVSQVTGFTAKISMGNGMQA + + LA+Q DIFRLLSF+YSSVGGFMNQVLLMTAV+LYVYAKL+IAFDPDF TVD VLDAISSQFLFQLGFLLILPIPLLLA G+QRA+STL NI+LRLAP FFIFSAGTNAHYVNSAVMTGQAKYQATGRGFVIAHE FV +FPLYL SHF PAFELLVVLIVYASF SGYFLETFSVYLL IGLLWTPLVFNPNGLDFTYASQDF GW+EWMNSPVDDPKK WLSWYS+ LEETRT+LP+ K+Q I RRSRLLILVYGFLTAIGEDY+GGIDGDVWPGS +VG +L V L M +SWIRSKCCPPK L+ G + AR RL KLF+LVG IVG+IVLT +DILES++QF FY+L +ILIYYV+ I+VLF EDALRNVAL +AF SVH +TG+VI+ P+L SF PLFVDLQTRMLFNEDFS+R Sbjct: 1449 VSKGRDTGVSQVTGFTAKISMGNGMQARSREVGRLASQFDIFRLLSFYYSSVGGFMNQVLLMTAVFLYVYAKLYIAFDPDFVDTVDDDVLDAISSQFLFQLGFLLILPIPLLLAVEQGMQRAVSTLFNIMLRLAPFFFIFSAGTNAHYVNSAVMTGQAKYQATGRGFVIAHEYFVDMFPLYLTSHFNPAFELLVVLIVYASFATSGYFLETFSVYLLIIGLLWTPLVFNPNGLDFTYASQDFTGWMEWMNSPVDDPKKGWLSWYSRVLEETRTELPFGKKLQAIFRRSRLLILVYGFLTAIGEDYDGGIDGDVWPGSVVVGTCMLIVVGLLMCQSWIRSKCCPPKALKGGIQAARWARLSKLFILVGVIVGVIVLTDLDILESIRQFIFYILSFVILIYYVSQIVVLFMEDALRNVALVNLAFKSVHLITGIVIIAPVLLLSFFPLFVDLQTRMLFNEDFSQR 1911
BLAST of mRNA_H-elongata_contig10038.39.1 vs. uniprot
Match: A0A835ZD62_9STRA (1,3-beta-glucan synthase component-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD62_9STRA) HSP 1 Score: 366 bits (940), Expect = 1.140e-113 Identity = 222/488 (45.49%), Postives = 301/488 (61.68%), Query Frame = 3 Query: 693 RGARGGQVQVGEEGWCGFVAKGRDTGVSQVTGFTAKISMGNGMQASAFSIKALATQLDIFRLLSFHYSSVGGFMNQVLLMTAVYLYVYAKLFIAFDPDFTTTVD----VAVLDAISSQFLFQLGFLLILPIPLLLA---GLQRAISTLANILLRLAPLFFIFSAGTNAHYVNSAVMTGQAKYQATGRGFVIAHEDFVQLFPLYLQSHFTPAFELLVVLIVYASFQN-SGYFLETFSVYLLCIGLLWTPLVFNPNGLDFTYASQDFGGWVEWMNSPVDDPKKSWLSWYSKELEETRTQLPYNIKIQVIVRRSRLLILVYGFLTAIGEDYEGGIDGDVWPGSAIVG--AIILAFVILFMSESWIRSKCCPPKQLQYGARRARIVRLWKLFVLVGAIVGIIVLTTVDILESVKQFFFYVLCVIILIYYVANILVLFTEDALRNVALARIAFWSVHFLTGLVIMVPILFSSFLPLFVDLQTRMLFNEDFSER 2126 RG R Q+ + G KGRD GVSQ+TGFTAKISMGNGMQA + + LA QLD FRL+SF+YSSVGGF+ Q LL+ +V+LY+Y KLFIAFDP ++ AV +SS F QLGFLLILPIP++ G+ A+ TL +LLRL+P FF+F AGTN++YVN+A+ G AKYQATGRGFVI HE+F+Q F YL SH+ PA ELLV+L++YA F YFLET SV+LL +G L++PL+FNPNGLD + DF W+ W+ S V+DP KSWL+WYSK E R + +I++ + RLL++ +GF+ I D + G +G A+++ F +L + + R K P R R++ L ++VGA++G+ + + + + V FF +V Y+V ++ F +ALR VA + +V GL+I P L SFLP D+QTRMLFN FS R Sbjct: 165 RGGRSSQLDYIQAG------KGRDVGVSQITGFTAKISMGNGMQARSREVCRLAQQLDFFRLMSFYYSSVGGFLTQCLLILSVFLYMYTKLFIAFDPVNAQLINDSGSEAVFQTVSSSFAIQLGFLLILPIPMVAFVEHGISDALGTLLGVLLRLSPFFFVFGAGTNSYYVNAAITQGTAKYQATGRGFVIEHENFLQGFRTYLPSHYLPALELLVLLLIYARFTIFHNYFLETLSVWLLVVGFLYSPLMFNPNGLDNQAVNADFQQWLTWLYSNVEDPSKSWLAWYSKVTETARQNCQFRKQIEITIMNLRLLLVAWGFVKGIEADRAKCGQFFIGVGWMCLGIFAVVVIFFVLALPFNKERDKKRHPFDYGSTQRVRRVLMLVAGVLVVGALIGVPLSNYISLEQMVYTFFAFVFAA----YFVTLTVLWFVPNALRRVAPVQFVLRAVALALGLLIQAPALLLSFLPFMADIQTRMLFNASFSAR 642
BLAST of mRNA_H-elongata_contig10038.39.1 vs. uniprot
Match: D7FXN7_ECTSI (1,3-beta-glucan synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN7_ECTSI) HSP 1 Score: 303 bits (775), Expect = 1.500e-84 Identity = 194/487 (39.84%), Postives = 295/487 (60.57%), Query Frame = 3 Query: 747 VAKGRDTGVSQVTGFTAKISMGNGMQASAFSIKALATQLDIFRLLSFHYSSVGGFMNQVLLMTAVYLYVYAKLFIAFDPDFTTTVDVAVLDAI-----SSQFLFQLGFLLILPIPLLLA---GLQRAISTLANILLRLAPLFFIFSAGTNAHYVNSAVMTGQAKYQATGRGFVIAHEDFVQLFPLYLQSHFTPAFELLVVLIVYASF--QNSG--YFLETFSVYLLCIGLLWTPLVFNPNGLDFTYASQDFGGWVEWMNSPVDDPKKSWLSWYSKELEETRTQLPYNIKIQVIVRRSRLLILVYGFLTAIG---EDYEGGIDGDVWPGSAIVGAIILAFVILFMSESWIRSKCCPPKQLQYGARRARIVRLWKLFVLVGAIVGIIVLTTVDILESVKQFFFYVLCVIILIYYVANILVLFT------------EDALRNVALARIAFWSVHFLTGLVIMVPILFSSFLPLFVDLQTRMLFNEDFSER 2126 V KGRD G+ Q+TGF AKISMGNGMQA + + +A QLDIFRLLSF YSSVG ++NQV L +++L+VYAK+++ FD + T D+ +D I S++++FQLGF+L++P+ L++A GL RAI I+LR + LFFIF + TNA+YVN A +TG+AKY +TGRGFVI H+ F+ + YLQSHF PAFE++++LIVY F + +G Y ETFSV+LL + LW+P++FNPNG+++ +DF GW+ WM + DDP KSW +W+ ++ E + + K+ + V R R L+LV+GF+T+I + E + W +V A+++ +I++ + +R++ GA + RL L V + ++ L +I+ +Q ++ V L+Y++ L + + A N+ + +VH GLVIM+P L +F P QTRM+FN++FS R Sbjct: 1436 VGKGRDVGLGQITGFVAKISMGNGMQARSREVHRIAQQLDIFRLLSFFYSSVGFYLNQVFLTLSIWLFVYAKVYLVFD---SRTADLGAIDPIVATVVSTEYVFQLGFMLVVPVLLVMAVESGLSRAIRKFVEIILRGSVLFFIFLSATNAYYVNKAFLTGEAKYMSTGRGFVIVHDRFLSQYCRYLQSHFAPAFEIMLLLIVYWHFGSKQTGFQYLAETFSVWLLVVAWLWSPVIFNPNGVEWLDVIKDFDGWLSWMMAGDDDPDKSWHAWWIQQNAEL-ADVMFRKKVVLFVWRCRFLVLVWGFVTSIKLSRVEKEMSVPEIRWLLLGVVFAVLV--IIVWQGVAGVRTRTS-------GAGGSTSGRLLGLLVSMALASAMLFLPVFNIVAF-EQMLYFAGAVGFLLYFLVVQASLSSRVVGGGNVHKAVDGAGNNIVWTT--YRAVHLTIGLVIMIPTLLVAFFPFMTHFQTRMMFNQNFSAR 1906
BLAST of mRNA_H-elongata_contig10038.39.1 vs. uniprot
Match: A0A6H5KMI5_9PHAE (GT48 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMI5_9PHAE) HSP 1 Score: 239 bits (611), Expect = 8.190e-67 Identity = 135/276 (48.91%), Postives = 189/276 (68.48%), Query Frame = 3 Query: 747 VAKGRDTGVSQVTGFTAKISMGNGMQASAFSIKALATQLDIFRLLSFHYSSVGGFMNQVLLMTAVYLYVYAKLFIAFDPDFTTTVDVAVLDAI-----SSQFLFQLGFLLILPIPLLLA---GLQRAISTLANILLRLAPLFFIFSAGTNAHYVNSAVMTGQAKYQATGRGFVIAHEDFVQLFPLYLQSHFTPAFELLVVLIVYASF--QNSG--YFLETFSVYLLCIGLLWTPLVFNPNGLDFTYASQDFGGWVEWMNSPVDDPKKSWLSWYSKE 1538 V KGRD G+ Q+TGF AKISMGNGMQA + + +A QLDIFRLLSF YSSVG ++NQV L +++L+VYAK+++ FD + T D+ +DAI S++++FQLGF+L++ + L++A GL RAI I+LR + LFFIF + TNA+YVN A +TG+AKY +TGRGFVI H+ F+ + YLQSHF PAFE++++LIVY F + +G YF ETFSV+LL +W ++ +DF GW+ WM + DDP KSW +W+ ++ Sbjct: 66 VGKGRDVGLGQITGFVAKISMGNGMQARSREVHRIAQQLDIFRLLSFFYSSVGFYLNQVFLTLSIWLFVYAKVYLVFD---SRTADLGAIDAIVATVVSTEYVFQLGFMLVVLVLLVMAVESGLSRAIRKFVEIILRDSVLFFIFLSATNAYYVNKAFLTGEAKYMSTGRGFVIVHDRFLPQYCRYLQSHFAPAFEIMLLLIVYWHFVSKQTGFQYFAETFSVWLLVRARVWLDVI------------KDFDGWLSWMMAGDDDPDKSWHAWWIQQ 326
BLAST of mRNA_H-elongata_contig10038.39.1 vs. uniprot
Match: S8CL99_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CL99_9LAMI) HSP 1 Score: 196 bits (497), Expect = 2.770e-51 Identity = 161/494 (32.59%), Postives = 246/494 (49.80%), Query Frame = 3 Query: 747 VAKGRDTGVSQVTGFTAKISMGNGMQASAFSIKALATQLDIFRLLSFHYSSVGGFMNQVLLMTAVYLYVYAKLFIAFDPDFTTTV-------DVAVLDAISSQFLFQLGFLLILPIPLLLAGLQRAISTLANIL----LRLAPLFFIFSAGTNAHYVNSAVMTGQAKYQATGRGFVIAHEDFVQLFPLYLQSHFTPAFELLVVLIVYASFQ-----NSGYFLETFSVYLLCIGLLWTPLVFNPNGLDFTYASQDFGGWVEWMNS--PVDDPK-KSWLSWYSKELEETRTQLPYNIKIQVIVRRSRLLILVYGF---LTAIGEDYEGGIDGDVWPGSAIVGAIILAFVILFMSESWIRSKCCPPKQLQYGARRARIVRLWKLFVLVGAIVGIIV------LTTVDILESVKQFFFYVLCVIILIYYVANILVLFTEDALRNVALARIAFWS--------VHFLTGLVIMVPILFSSFLPLFVDLQTRMLFNEDFS 2120 V KGRD G++Q++ F AK++ GNG Q + I L + D FR+LS +Y++ G +++ +L++ VY Y+Y +L+++ V D A+ ++SQ L QLG L+ LP+ ++ GL+R T A L L+LA +FF FS GT HY ++ G AKY+ATGRGFV+ HE F + + +Y +SHFT A E++++L+VY S+ ++ Y T S++ L + L+ P +FNP+G ++ DF W +WM+S + P KSW SW+ +ELE + + IV R + YG L A+ D + G W +ILA VI+ S R K QL + RL KLF+ V I I+V LT D++ + F +L A R V A + WS +L +VI P+ ++ P + QTR+LFN+ FS Sbjct: 22 VGKGRDVGLNQISLFEAKVACGNGEQTLSRDIYRLGHRFDFFRMLSCYYTTTGFYVSSMLVVLTVYAYLYGRLYLSLSGMERAIVRYAKAKGDDALKAVMTSQSLVQLGLLMALPM-IMEIGLERGFRTAAGELIIMQLQLASVFFTFSLGTKVHYFGRTILHGGAKYRATGRGFVVKHEKFAENYRMYSRSHFTKALEMMILLVVYHSYNAAAPDSTTYTFITLSMWFLVVSWLFAPFLFNPSGFEWQKIVDDFEDWTKWMSSCGGIGVPATKSWESWWEEELEHLQYTGLLG-RFWEIVLSLRFFLYQYGIVYQLHAVQNDKSLLVYGLSW-------LVILAVVIILKIVSMGRQKFSADFQLLF--------RLLKLFLFVAFIATILVFIKFLELTGGDMVACLMGFL------------PTGWALLLIAQACRPVVKA-VGMWSSVKALARGYEYLMAIVIFAPVAILAWFPFVSEFQTRLLFNQAFS 485
BLAST of mRNA_H-elongata_contig10038.39.1 vs. uniprot
Match: S8CB16_9LAMI (1,3-beta-glucan synthase (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CB16_9LAMI) HSP 1 Score: 193 bits (491), Expect = 8.370e-48 Identity = 156/482 (32.37%), Postives = 255/482 (52.90%), Query Frame = 3 Query: 747 VAKGRDTGVSQVTGFTAKISMGNGMQASAFSIKALATQLDIFRLLSFHYSSVGGFMNQVLLMTAVYLYVYAKLFIAFD--PDFTTTV-DVAVLDAI-SSQFLFQLGFLLILPIPL---LLAGLQRAISTLANILLRLAPLFFIFSAGTNAHYVNSAVMTGQAKYQATGRGFVIAHEDFVQLFPLYLQSHFTPAFELLVVLIVYASFQNSG-----YFLETFSVYLLCIGLLWTPLVFNPNGLDF---TYASQDFGGWVEWMNSPVDDPKKSWLSWYSKELEETRTQLPYNIKIQVIVRRSRLLILVYGFLTAIGEDYEGGIDGDVWPGSAIVGAIILAFVIL------FMSESWIRSKCCPPKQLQYGARRARIVRLWKLFVLVGAIVGIIVLTTVDILESVKQFFFYVLCVIILIYYVANILVLFTEDAL---RNVALARIAFWSVHFLTGLVIMVPILFSSFLPLFVDLQTRMLFNEDFS 2120 V KGRD G++Q++ F AK++ GNG Q + + L +LD FR+LSF Y+SVG + N ++++ V+ +++ +L+++ ++ D A L AI + QF Q+G LP+ + L G ++I + L+LA FF FS GT AHY ++ G AKY+ATGRGFV+ H+ F + F LY +SHF A EL V+L+VYA+ + G Y L T S + L I + P +FNP+G D+ Y +DF W+ W + +SW +W+ +E + RT + K+ IV R + YG + Y I G G+ + +L+++ L ++ + R + + L Y R+V+L + + V +V ++ T + ++ V+ F +V +I +A +L F + + V+LAR+ L G+++MVP+ S+LP F +QTR+LFNE FS Sbjct: 1262 VGKGRDVGLNQISMFEAKVASGNGEQVLSRDVYRLGHRLDFFRMLSFFYTSVGYYFNNMMVVITVFAFLWGRLYVSLSGIENYARNANDNAALGAILNQQFFIQIGIFTALPMIIENALEKGFLQSIWDFVTMQLQLASFFFTFSMGTRAHYFGRTILHGGAKYRATGRGFVVQHKSFAENFRLYARSHFVKAIELGVILLVYAANTSIGLNALVYVLMTVSSWFLVISWIMAPFMFNPSGFDWLKTVYDFEDFMKWI-WYQGILVKSDQSWETWWYEEQDHLRTTGLWG-KLLEIVLDLRFFVFQYGVV------YHLNISG----GNTSIVVYLLSWIYLVAAVGLYVVIGYARDRWSAREHLSY-----RVVQLAVIVLTVVVVVLLLRFTRITAMDFVQSFLAFVPTGWGMIL-IAQVLRPFLQSTVVWETVVSLARLY----DMLFGMIVMVPLGLMSWLPGFQQMQTRILFNEAFS 1721
BLAST of mRNA_H-elongata_contig10038.39.1 vs. uniprot
Match: A0A2K1KLT8_PHYPA (1,3-beta-glucan synthase n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KLT8_PHYPA) HSP 1 Score: 192 bits (489), Expect = 1.610e-47 Identity = 150/484 (30.99%), Postives = 244/484 (50.41%), Query Frame = 3 Query: 747 VAKGRDTGVSQVTGFTAKISMGNGMQASAFSIKALATQLDIFRLLSFHYSSVGGFMNQVLLMTAVYLYVYAKLFIAF---DPDFTTTVDV----AVLDAISSQFLFQLGFLLILPIPLLLA---GLQRAISTLANILLRLAPLFFIFSAGTNAHYVNSAVMTGQAKYQATGRGFVIAHEDFVQLFPLYLQSHFTPAFELLVVLIVYASF--QN---SGYFLETFSVYLLCIGLLWTPLVFNPNGLDFTYASQDFGGWVEWM---NSPVDDPKKSWLSWYSKELEETRTQLPYNIKIQVIVRRSRLLILVYGFLTAIGEDYEGGIDGDVWPGSAIVGAIILAFVILFMSESWIRSKCCPPKQLQYGARRARIVRLWKLFVLVGAIVGIIVLTTVDILESVKQFFFYVLCVIILIYYVANILVLFTE--------DALRNVALARIAFWSVHFLTGLVIMVPILFSSFLPLFVDLQTRMLFNEDFS 2120 V KGRD G++Q+ F AK++ GNG Q A + L LD R+LSF ++SVG ++ ++ + +Y+++Y K ++A D D+ A+ ++SQFLFQ+G +P+ + L GL +AI + + L+LA +FF FS GT HY V+ G AKY++TGRGFV+ H +F + + L+ +SHFT AFE++++L+VY ++ QN + Y L TFS + L + L+ P +FNP+G ++ DF W W+ SW +W+++E RT K + R YG + DV GS + + ++++LF+ + K A VRL++ +L+G I G I+ L S+ F L ++ + + +I +LF D++R +A AF G++I +PI S+ P F QTR++FN+ FS Sbjct: 1539 VGKGRDVGLNQIATFEAKVASGNGEQVLARDVYRLGQLLDFPRMLSFFFTSVGFYVTTMMTVLTLYVFLYGKAYLALSGVDASLKANNDILGNSALQSVLASQFLFQIGMFTAVPMIVNLVLEQGLLKAIMSFCTMQLQLASVFFTFSLGTRTHYFGRIVLHGGAKYRSTGRGFVVRHINFAENYRLFSRSHFTKAFEIVMLLVVYLAYGAQNRTSATYILLTFSSWFLALSWLYAPYIFNPSGFEWQKTVDDFEDWTNWIMYKGGVGVTSDNSWEAWWAEEQAHLRTA---GGKFWEFILCLRFFFFQYGVSYQL----------DVIQGSTSILVYVYSWILLFVCVLIFKVFTISQKASSKRATLHLAVRLFQAALLLGLITGGILAIIFSPL-SITDVFALALGIVPTGWGLISIAILFQPLVQYIGVWDSVREIARMYDAFM------GIIIFIPIALFSWFPFFSTFQTRLVFNQAFS 2002
BLAST of mRNA_H-elongata_contig10038.39.1 vs. uniprot
Match: A0A6P6TCM4_COFAR (1,3-beta-glucan synthase n=1 Tax=Coffea arabica TaxID=13443 RepID=A0A6P6TCM4_COFAR) HSP 1 Score: 190 bits (482), Expect = 1.210e-46 Identity = 156/500 (31.20%), Postives = 249/500 (49.80%), Query Frame = 3 Query: 747 VAKGRDTGVSQVTGFTAKISMGNGMQASAFSIKALATQLDIFRLLSFHYSSVGGFMNQVLLMTAVYLYVYAKLFIAFDPDFTTTV-------DVAVLDAISSQFLFQLGFLLILPIPLLLAGLQRAISTLAN----ILLRLAPLFFIFSAGTNAHYVNSAVMTGQAKYQATGRGFVIAHEDFVQLFPLYLQSHFTPAFELLVVLIVY-----ASFQNSGYFLETFSVYLLCIGLLWTPLVFNPNGLDFTYASQDFGGWVEWMNSP--VDDP-KKSWLSWYSKELEETRTQLPYNIKIQVIVRRSRLLILVYGF---LTAIGEDYEGGIDGDVWPGSAIVGAIILAFVILFMSESWIRSKCCPPKQLQYGARRARIVRLWKLFVLVGAIVGI------IVLTTVDILESVKQFFFYVLCVIILIYYVANILVLFTEDALRNVALA------RIAFWS--------VHFLTGLVIMVPILFSSFLPLFVDLQTRMLFNEDFS 2120 V KGRD G++Q++ F AK++ GNG Q+ + I L + D FR+LS Y++ G + +L++ AVY ++Y KL+++ + + D A+ A++SQ + Q+GFL +LP+ + + GL+R T A + L+LAP+FF FS GT HY ++ G AKY+ATGRGFV+ HE F + + +Y +SHFT A E++V+LIVY A+ ++ + TFS++ L + L+ P +FNP+G ++ +D+ W++W+ + + P KSW SW+ +E E + + + I R + YG L + + G W +I+A +I+ S R K QL + RL K+F+ + +V I + LT DI S+ F L T AL +A A + W +L GLVI PI ++ P + QTR+LFN+ FS Sbjct: 1414 VGKGRDVGLNQISLFEAKVACGNGEQSLSRDIYRLGHRFDFFRMLSCFYTTTGFYAGSMLVVLAVYAFLYGKLYLSLSGLEQSIIKFSRSRRDNALRTAMASQSIVQIGFLTMLPMVMEI-GLERGFRTAAGDVIIMQLQLAPVFFTFSLGTKVHYFGRTIIHGGAKYRATGRGFVVRHEKFAENYRMYSRSHFTKALEIMVLLIVYEIYGSAATGSAAFLFLTFSMWFLVVSWLFAPFLFNPSGFEWQKIVEDWDDWMKWIGNRGGIGVPANKSWESWWDEEQEHLQ-HTGFLGRFWEIFLSLRFFLYQYGIVYHLHVANNEKSIMVYGLSW-------LVIVAVMIILKIVSMGRKKFSADFQLMF--------RLLKMFLFIAFLVTIGIMFTFLSLTVGDIFSSLLAF-------------------LPTGWALLQIAQACRPIVKGLGMWGSVKALARGYEYLMGLVIFTPIAVLAWFPFVSEFQTRLLFNQAFS 1877
BLAST of mRNA_H-elongata_contig10038.39.1 vs. uniprot
Match: A0A068UAR2_COFCA (1,3-beta-glucan synthase n=1 Tax=Coffea canephora TaxID=49390 RepID=A0A068UAR2_COFCA) HSP 1 Score: 190 bits (482), Expect = 1.210e-46 Identity = 156/500 (31.20%), Postives = 249/500 (49.80%), Query Frame = 3 Query: 747 VAKGRDTGVSQVTGFTAKISMGNGMQASAFSIKALATQLDIFRLLSFHYSSVGGFMNQVLLMTAVYLYVYAKLFIAFDPDFTTTV-------DVAVLDAISSQFLFQLGFLLILPIPLLLAGLQRAISTLAN----ILLRLAPLFFIFSAGTNAHYVNSAVMTGQAKYQATGRGFVIAHEDFVQLFPLYLQSHFTPAFELLVVLIVY-----ASFQNSGYFLETFSVYLLCIGLLWTPLVFNPNGLDFTYASQDFGGWVEWMNSP--VDDP-KKSWLSWYSKELEETRTQLPYNIKIQVIVRRSRLLILVYGF---LTAIGEDYEGGIDGDVWPGSAIVGAIILAFVILFMSESWIRSKCCPPKQLQYGARRARIVRLWKLFVLVGAIVGI------IVLTTVDILESVKQFFFYVLCVIILIYYVANILVLFTEDALRNVALA------RIAFWS--------VHFLTGLVIMVPILFSSFLPLFVDLQTRMLFNEDFS 2120 V KGRD G++Q++ F AK++ GNG Q+ + I L + D FR+LS Y++ G + +L++ AVY ++Y KL+++ + + D A+ A++SQ + Q+GFL +LP+ + + GL+R T A + L+LAP+FF FS GT HY ++ G AKY+ATGRGFV+ HE F + + +Y +SHFT A E++V+LIVY A+ ++ + TFS++ L + L+ P +FNP+G ++ +D+ W++W+ + + P KSW SW+ +E E + + + I R + YG L + + G W +I+A +I+ S R K QL + RL K+F+ + +V I + LT DI S+ F L T AL +A A + W +L GLVI PI ++ P + QTR+LFN+ FS Sbjct: 1433 VGKGRDVGLNQISLFEAKVACGNGEQSLSRDIYRLGHRFDFFRMLSCFYTTTGFYAGSMLVVLAVYAFLYGKLYLSLSGLEQSIIKFSRSRRDNALRTAMASQSIVQIGFLTMLPMVMEI-GLERGFRTAAGDVIIMQLQLAPVFFTFSLGTKVHYFGRTIIHGGAKYRATGRGFVVRHEKFAENYRMYSRSHFTKALEIMVLLIVYEIYGSAATGSAAFLFLTFSMWFLVVSWLFAPFLFNPSGFEWQKIVEDWDDWMKWIGNRGGIGVPANKSWESWWDEEQEHLQ-HTGFLGRFWEIFLSLRFFLYQYGIVYHLHVANNEKSIMVYGLSW-------LVIVAVMIILKIVSMGRKKFSADFQLMF--------RLLKMFLFIAFLVTIGIMFTFLSLTVGDIFSSLLAF-------------------LPTGWALLQIAQACRPIVKGLGMWGSVKALARGYEYLMGLVIFTPIAVLAWFPFVSEFQTRLLFNQAFS 1896
BLAST of mRNA_H-elongata_contig10038.39.1 vs. uniprot
Match: D8R536_SELML (1,3-beta-glucan synthase n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R536_SELML) HSP 1 Score: 189 bits (479), Expect = 2.800e-46 Identity = 148/483 (30.64%), Postives = 244/483 (50.52%), Query Frame = 3 Query: 747 VAKGRDTGVSQVTGFTAKISMGNGMQASAFSIKALATQLDIFRLLSFHYSSVGGFMNQVLLMTAVYLYVYAKLFIAFDPD-----FTTTVDVAVLDAISSQFLFQLGFLLILPIPL---LLAGLQRAISTLANILLRLAPLFFIFSAGTNAHYVNSAVMTGQAKYQATGRGFVIAHEDFVQLFPLYLQSHFTPAFELLVVLIVYASFQNSG-----YFLETFSVYLLCIGLLWTPLVFNPNGLDFTYAS---QDFGGWVEWMNSPVDDPKKSWLSWYSKELEETRTQLPYNIKIQVIVRRSRLLILVYGFLTAIG-EDYEGGIDGDVWPGSAIVGAIILAFVILFMSESWIRSKCCPPKQLQYGARRARIVRLWKLFVLVGAIVGIIVLTTVDILESVKQFFFYVLCVIILIYYVANILVLFTEDALRNVALARIAFWSVHFLT--------GLVIMVPILFSSFLPLFVDLQTRMLFNEDFS 2120 V KGRD G++Q+ F AK++ GNG Q + + L +LD FR+LSF+Y++VG ++N ++++ VY +++ ++++A ++T + A+ A++ QF+ QLG LP+ + + G +A+ I L+LA +FF FS GT HY ++ G AKY+ATGRGFV+ HE F + + LY +SHF EL ++L+VY ++ + Y L TFS + L + + P VFNP+G D+ +DF WV + + +SW SW+ +E + RT + K+ ++ R YG + +G ++ I + +V A +L ++ F E K + L Y R ++ + LF V ++ +I LT+ L+ L V +L + +L LR L R W G+++MVP S+LP F +QTR+LFN+ FS Sbjct: 1271 VGKGRDVGLNQIALFEAKVASGNGEQTLSRDVYRLGHRLDFFRMLSFYYTTVGFYLNNMMVVLTVYAFLWGRVYLALSGVERGLLSSSTSNSALTAALNQQFIVQLGLFTALPMIVENSIERGFSKAVWDFFTIQLQLASMFFTFSMGTKTHYFGRTLLHGGAKYRATGRGFVVKHERFAENYRLYSRSHFIKGLELALLLVVYEAYGSFSKDTVVYILLTFSSWFLALTWILAPFVFNPSGFDWLKTVDDYEDFFNWVFYRGGVLVKADQSWESWWDEEQDHLRTTGIWG-KVFEVILSLRFFFFQYGIVYQLGIANHSTSILVYLLSWIYVVVAFLLHKILSFAHE-----KYATREHLTY-----RAIQAFALFFSVLVLIVLIELTSFRFLD---------LIVSLLAFLPTGWGLLQIAQVLRRPFLERTGMWPTVVTVARLYELGIGILVMVPTAVLSWLPGFQAMQTRILFNQAFS 1733 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10038.39.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10038.39.1 >prot_H-elongata_contig10038.39.1 ID=prot_H-elongata_contig10038.39.1|Name=mRNA_H-elongata_contig10038.39.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=440bp MGNGMQASAFSIKALATQLDIFRLLSFHYSSVGGFMNQVLLMTAVYLYVYback to top mRNA from alignment at H-elongata_contig10038:423..9027+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10038.39.1 ID=mRNA_H-elongata_contig10038.39.1|Name=mRNA_H-elongata_contig10038.39.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8605bp|location=Sequence derived from alignment at H-elongata_contig10038:423..9027+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10038:423..9027+ >mRNA_H-elongata_contig10038.39.1 ID=mRNA_H-elongata_contig10038.39.1|Name=mRNA_H-elongata_contig10038.39.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2640bp|location=Sequence derived from alignment at H-elongata_contig10038:423..9027+ (Himanthalia elongata Himel1 dioecious)back to top |