mRNA_H-elongata_contig10031.34.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig10031.34.1 vs. uniprot
Match: D8LP20_ECTSI (Vacuolar protein sorting-associated protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP20_ECTSI) HSP 1 Score: 577 bits (1488), Expect = 2.320e-177 Identity = 419/953 (43.97%), Postives = 499/953 (52.36%), Query Frame = 1 Query: 1 GYLVLEDMHIKKSLLDTLELPLALVHGVIGRLEISIPWTNLGREPIVVAVDQVFLVVEPKFDWDAEAVKRREQAAKSARIATAEIFRNSPLDDVAPSSSAGPSRASWGSGLQKWVTDRVITRIVGSLQIHVRDVHVRYEDHLSQPGAPFYVGAMIESLHAVSTSGAWQPQTVGLPKGSGSRSSTASLSSSRTEARR--------RNGVKVLQGASEEDTASEGQGVAG------SGGR-----------------------------DRLVKKELSLNQLAVYWNPAEDGNPCSMHLSDIPVEQAEVVISRREEGTTDEGGLEAVAGKPSIARGEKLRHRYLLEPVDVKAHVALSVDPMDRSQPRCQAQVEVGAMSGRLEDFQVQGGMCLGAALARYEEIGKYSKYRPQVPVRVDPSAWWHFALRVVVERLRAEGGWRQS-FPDIVRRRRMRLEYMPLWVKSRGWGTTRDEQTSSYDGGA---------------GIEPC-SPRSPTASSSSAETPASYEHSPCSTKSSSGPYSGQALSWPESSGDDDVDVEAP-----------------------VWPAGLSGQRTAARRRSRQVVAHEEV--------VAARTRLEEMEKELSVEDIMFFRAMAERKETR-SFGRTRKS-----------DVGNRRGIGGWVSIFYLKRVFIERGEGGRHRAKKNGFLRHPLSQSKAGWAMGAADPGEEEDKTESTEENFRRLFAAIDCDPSRSSPPLEGRGEGAEANAAGEAVGGRGVPSDREGWLAVSLNLHAEEGDMVLSNSGTTSAARHPLKAKATMSSTSRAR---------PFAGVRFRGFSLCLELCGDDMDGVLASAALEDLSVHQRLHFFGGGRGRGQGEESRAPIVARRAR---SALGGGRG--------SASS------QVPPIFDIHVEVNPRDPEYGARVYLDVDQV 2472 GYLVLEDMHIKK+L+D LELPLAL HG+IGRL+I IPW+ L ++PI+V VD+VFLVVEPKF+WDA AVKRRE+A K +IA AE+FR SPLDD S+ G S+A WGSGLQKWVTDR+ITRIV SLQIHVR+VHVRYED S P PFY+GA +ES+ ST W+ Q G G R T NG++ G + ++ G GV G SG R DRLVKK L LNQLAVYWNPAE GNPCSM LSDIPV+QAEVVISR D+ G EA AG GE LRHRYLLEPVD A VALSVDP DRSQPR QAQVE+G +S +LE FQ+QG MCLGA++ARY E+GKY K+RP+VPV DP+AWW FA VVV++LRA+G S FPD+ +RRRMRLEYMPLW K+ G + G E C SPRSP+ S PAS +P + ++ +A+ P SSG V AP R + R + EE + RLE +E+ELS EDI+ FRAMAER++ GR D GNR GIGGWVS + G G ++ P+ A G D E +ENFRRLFAAID DPS +P G G GWLA+SLNL A EG +VL+ PF VRFRG +C EL G+DMD VLASAAL+DL V++ GGG G S PIV RRA SA G G G S+SS Q PP+F++ E+NPRD EY A+VYL VDQV Sbjct: 35 GYLVLEDMHIKKTLMDMLELPLALRHGIIGRLQIQIPWSTLNKDPILVDVDRVFLVVEPKFEWDAGAVKRRERAVKRGKIAAAELFRTSPLDDTPAGSTEGGSKARWGSGLQKWVTDRLITRIVDSLQIHVREVHVRYEDRTSNPSTPFYLGATLESVWLESTDQGWEVQP-GPRSGPIRRGGTGXXXXXXXXXXXXXXXXXXXENGIEATTGVASSSSSPRGDGVGGDDPAMSSGARAVGNXXXXXXXPGARSXXXXGGSRGVVVGDRLVKKTLQLNQLAVYWNPAESGNPCSMDLSDIPVDQAEVVISRLIARKDDDAG-EAGAGN---GPGEPLRHRYLLEPVDANARVALSVDPSDRSQPRVQAQVELGTISCQLEHFQLQGAMCLGASVARYGEVGKYFKHRPEVPVLEDPAAWWRFAFAVVVDKLRADGFSHSSRFPDMAKRRRMRLEYMPLWKKALGLSSAXXXXXXXXXXXXXXXXXXXXXXXXXXDGAELCPSPRSPSGS-----VPASSSAAPSPSFGTNTAAEAEAV--PPSSG----GVRAPNGVEKDGXXXXXXXXXXXXXXXXXXXXXXXXARDGSAEREEPLTPVEEPYEDDDDADAKDKARLEALEEELSFEDIVIFRAMAEREDALLRAGRENHXXXXXXXXXXXXDGGNRWGIGGWVSWA------MRAGTGADRSGDRSSADHGPVGAKAKDAAAGXXXXXXXXDHGE--DENFRRLFAAIDFDPSARAPXXXXXXXXXXXXXX-XXXGAAGWG----GWLAISLNLRAPEGSLVLAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFMDVRFRGLEVCAELHGEDMDAVLASAALDDLGVYE---LNGGGSTEKLGHSS--PIVTRRALPGGSAGGVGVGXXXXPSYISSSSLAPLQQQRPPLFEMRFEMNPRDVEYDAKVYLAVDQV 953
BLAST of mRNA_H-elongata_contig10031.34.1 vs. uniprot
Match: A0A6H5JPL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL9_9PHAE) HSP 1 Score: 543 bits (1400), Expect = 2.650e-173 Identity = 399/937 (42.58%), Postives = 490/937 (52.29%), Query Frame = 1 Query: 22 MHIKKSLLDTLELPLALVHGVIGRLEISIPWTNLGREPIVVAVDQVFLVVEPKFDWDAEAVKRREQAAKSARIATAEIFRNSPLDDVAPSSSAGPSRASWGSGLQKWVTDRVITRIVGSLQIHVRDVHVRYEDHLSQPGAPFYVGAMIESLHAVSTSGAWQ----PQTVGL-PKGSGSRSSTA--SLSSSRTEARRRNGVKVLQGASEEDTASEGQGVAG------SGGR-------------------------------DRLVKKELSLNQLAVYWNPAEDGNPCSMHLSDIPVEQAEVVISR---REEGTTDEGGLEAVAGKPSIARGEKLRHRYLLEPVDVKAHVALSVDPMDRSQPRCQAQVEVGAMSGRLEDFQVQGGMCLGAALARYEEIGKYSKYRPQVPVRVDPSAWWHFALRVVVERLRAEGGWRQS-FPDIVRRRRMRLEYMPLWVKSRGWGTTRDEQTSSYDGGAGIEPCS-PRSPTAS---SSSAETPASYEHSPCSTKSSSGPYSGQ--ALSWPESSGD-------------------DDVDVEAPVWPAGLSGQRTAARRRSRQVV----AHEEVVAA---RTRLEEMEKELSVEDIMFFRAMAERKETR-SFGRTRKSDVG-----------NRRGIGGWVSIFYLKRVFIERGEGGRHRAKKNGFLRHPLSQSKAGWAMGAADPGEEEDKTESTEENFRRLFAAIDCDPSRSSPPLEGRGEGAEANAAGEAVGGRGVPSDREGWLAVSLNLHAEEGDMVLSNSGTTSAARHPLKAKATMSSTSRARP---------FAGVRFRGFSLCLELCGDDMDGVLASAALEDLSVHQRLHFFGGGRGRGQGEESRAPIVARRAR-SALGGGRG----------SASS--------QVPPIFDIHVEVNPRDPEYGARVYLDVDQV 2472 MHIKK+L+D LELPLAL HG+IGRL+I IPW+ L ++PI+V VD++FLVVEPKF+WDA AVK+RE+A K +IA AE+FR SPLDD SS G S+A WGSGLQKWVTDR++TRIV SLQIHVR+VH+RYED +S P PFY+GA +ESL ST W+ P++ + P G+G +A + R +A N ++ G + ++ G GV G SG R DRLVKK L LNQLAVYWNPAE GNPCSM LSDIPV+QAEVVISR R++ DE G AG+P LRHRYL+EPVD A VALSVDP DRSQPR QAQVE+G +S +LE FQ+QG MCLGA++ARY E+GKY K+RP+VPV DP+AWW FA VVV++LRA+G S FPD+ +RRRM + GAG+ CS PRSP+ S SSS + SG AL+ E G G R R + +HE+ A ++RLEE+E+ELS EDI+ FRAMAER++ GR G NR GIGGWVS + R G A + +AG G D GE+E NFRRLFAAID DPS +P G G GWLA+SLNL A EG +VL+ F VRFRG +C EL G+DMD VLASAAL+DL V++ GGG G S PIV RRA +GGG G S+SS Q PP+F++ E+NPRD EY A+VYL VDQV Sbjct: 1 MHIKKTLMDMLELPLALRHGIIGRLQIQIPWSTLNKDPILVDVDRIFLVVEPKFEWDAGAVKQRERAVKRGKIAAAELFRTSPLDDTPAGSSEGGSKARWGSGLQKWVTDRLVTRIVDSLQIHVREVHLRYEDRISNPSTPFYLGATVESLWLESTDQGWEVQPGPRSGPIRPGGTGGEGESAVPPRNGGRRKAASENEIEATTGVAASSSSPRGDGVGGDDPAISSGARAVGNXXXXXXXXXXXXXXXXXXXGSRSVVVGDRLVKKTLQLNQLAVYWNPAESGNPCSMDLSDIPVDQAEVVISRLIARKDDDADEAGAGNGAGEP-------LRHRYLIEPVDASARVALSVDPSDRSQPRVQAQVELGTISCQLEHFQLQGAMCLGASVARYGEVGKYFKHRPEVPVLEDPAAWWRFAFAVVVDKLRADGFSHSSRFPDMAKRRRMSIAXXXXXXXXXXXD------------GAGL--CSSPRSPSGSGPASSSXXXXXXFXXXXXXXXXXXXXXSGGVIALNGVEKDGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAREGRAEREQPSTPREESHEDDDAGANDKSRLEELEEELSFEDILIFRAMAEREDVLLRAGRDNHPRNGXXXXXXXXXXXNRWGIGGWVS--WAMRAGTRADRSGNRSA----------ADYRAGAGAGEGDHGEDE--------NFRRLFAAIDFDPSARAPXXXXXXXXXXXXXXXYGTEGWG------GWLAISLNLRAPEGSLVLAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMDVRFRGLEVCAELHGEDMDAVLASAALDDLGVYE---LNGGGSTEKLGLSS--PIVTRRALPGGIGGGVGVGXXXTSCFSSSSSLASPQLQQQRPPLFEMRFEMNPRDAEYDAKVYLAVDQV 885
BLAST of mRNA_H-elongata_contig10031.34.1 vs. uniprot
Match: A0A482SWM9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWM9_9ARCH) HSP 1 Score: 155 bits (391), Expect = 3.580e-38 Identity = 108/322 (33.54%), Postives = 169/322 (52.48%), Query Frame = 1 Query: 1 GYLVLEDMHIKKSLLDTLELPLALVHGVIGRLEISIPWTNLGREPIVVAVDQVFLVVEPKFDWDAEAVKRREQAAKSARIATAEIFRNSPLDDVAPSSSAGPSRASWGSGLQK-WVTDRVITRIVGSLQIHVRDVHVRYEDHLSQPGAPFYVGAMIESLHAVSTSGAWQPQTVGLPKGSGSRSSTASLSSSRTEARRRNGVKVLQGASEEDTASEGQGVAGSGGRDRLVKKELSLNQLAVYWNPAEDG--NPCS-MHLSDIPVEQAEVVISRREEGTTDEGGLEAVAGKPSIARG----EKLRHRYLLEPVDVKAHVALSVD 942 G +VLE++ +K S+ + LE+P+AL +G IGRLE+ IPW+ LG EP+ V +D+++++VEPK++W + A +RREQA K A++A AE+F N L + S S G + GL K W ++++IV Q+ +R++H+RYED +S P F VG ESLH +S G + P SG+ T RN L ++G+ +LV+ LN AVYWNP + + CS M + P E ++A+ + ++R E+ RH Y+L PVD+K+ + +SV+ Sbjct: 35 GLIVLENLVLKNSIFNLLEVPVALSYGYIGRLELHIPWSRLGYEPVTVVLDKIYILVEPKYEWHSGAQERREQAMKQAKLAAAELFANQRLQEN--SGSGGYA------GLAKNWFMGALLSKIVDKFQVTIRELHIRYEDKMSCP-TEFCVGISFESLHVLSREGTSSHEEENTPTRSGTNIDTT-----------RNYDSELH-------------ISGADAFYKLVE----LNHFAVYWNPLQPKGLDACSCMFIGRGPRE------------------IQALMSRTVVSRVYKSYERPRHHYVLNPVDIKSFLDVSVN 301
BLAST of mRNA_H-elongata_contig10031.34.1 vs. uniprot
Match: A0A2R5G2R3_9STRA (Vacuolar protein sorting-associated protein 13A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G2R3_9STRA) HSP 1 Score: 145 bits (367), Expect = 8.470e-32 Identity = 131/497 (26.36%), Postives = 213/497 (42.86%), Query Frame = 1 Query: 1 GYLVLEDMHIKKSLLDTLELPLALVHGVIGRLEISIPWTNLGREPIVVAVDQVFLVVEPKFDWDAEAVKRREQAAKSARIATAEIFRNS----PLDDVAPSSSAGPSRASWGSGLQK-WVTDRVITRIVGSLQIHVRDVHVRYEDHLSQPGAPFYVGAMIESLHAVSTSGAWQPQTVGLPKGSGSRSSTASLSSSRTEARRR--NGVKVLQGASEEDTASEGQGVAGSGGRDRLVKKELSLNQLAVYWNP--AEDGNPCSMHLSDIPVEQAEVVISR-------REE--------------------GTTDEGGLEAVAGKPSIA------RG----------EKLR--------------------------HRYLLEPVDVKAHVALSVDPMDRSQPRCQAQVEVGAMSGRLEDFQVQGGMCLGAALARYEEIGKYSKYRPQ-VPVRVDPSAWWHFALRVVVERLRAEGGWRQSFPDIVRRRRMRLEYMPLWVKS 1254 G++VL ++ ++K DT+ +P+ L G IG++++ IPWT+LG +P+ +++D+VFL++EP +++ +R+ +A K A +A AE+ ++S P D + + + S + K T R++ +IV +++++VR+VHVRYED ++ P F VGA ESL ST W P V L +E +RR K L+ L K L+ A+YW+P N + S + + R +EE G+ GGL K A RG E++R H ++LEPV + + + DP P +++ ++ LE FQ + AA E+ Y+++RPQ V VR P WW FA+R +E ++ E R S I RR+ RL Y+ LW +S Sbjct: 35 GHMVLSELEVRKDAFDTVGVPIKLRRGFIGQVDVKIPWTHLGSQPVEISIDRVFLILEPSLEYNERDYQRKVKARKKADLARAELRKSSGMTNPAGDADDTDAISRAHMSEAEEMAKVGFTARLMNKIVDNIELNVRNVHVRYEDRVTNPKHAFSVGATWESLKMQSTDRHWTPCFVDLV----------------SEIKRRLDESGKYLE--------------------KLLAYKLFRLDHFAIYWDPFPGTSTNGADLDYSTCTFAEMAAIFERMIPKRQQQEEEDYRLVERETRRARAQASPAGSGAAGGLAGAGSKHGSAEELTDGRGSASDRPLEDSERIRSAAXXXXXXXXXXHQKTRARLGTGAQHCFVLEPVSLTLKMQSNRDPRFPESPDTVVDLDIATVTLVLERFQYLDAWEMLAAFDAAEKSYPYAQFRPQGVTVRDAPRIWWQFAIRATLENVQ-ERRRRFSPEYITDRRQDRLLYIELWKRS 494
BLAST of mRNA_H-elongata_contig10031.34.1 vs. uniprot
Match: A0A3D8R395_9HELO (Vacuolar protein sorting-associated protein n=2 Tax=Coleophoma TaxID=453209 RepID=A0A3D8R395_9HELO) HSP 1 Score: 135 bits (339), Expect = 1.800e-28 Identity = 116/427 (27.17%), Postives = 197/427 (46.14%), Query Frame = 1 Query: 1 GYLVLEDMHIKKSLLDTLELPLALVHGVIGRLEISIPWTNLGREPIVVAVDQVFLVVEPKFD--WDAEAVKRREQAAKSARIATAEIFRNSPLDDVAPSSSAGPSRASWGSGLQKWVTDRVITRIVGSLQIHVRDVHVRYEDHLSQPGAPFYVGAMIESLHAVSTSGAWQPQTVGLPKGSGSRSSTASLSSSRTEARRRNGVKVLQGASEEDTASEGQGVAGSGGRDRLVKKELSLNQLAVYWNPAEDGNPCSMHLSDIPVEQAEVVISRREEGTTDEGGLEAVAGKPSIARGE---KLRHRYLLEPVDVKAHVALS-VDPMDRSQPRCQAQV-EVGAMSGRLEDFQVQGGMCLGAALARYEEIGKYSKYRPQ-VPVRVDPSAWWHFALRVVVERLRAEGGWRQSFPDIVRRRRMRLEYMPLWVKSR 1257 G + L ++ +++ LD L+LP+ + G +G+L +SIPW+ LG P+ V ++ V+L+ PK D WD E +RR+Q K ++ +AE+ ++ +D A +S AS + L + +I+ +LQI ++++HVRYED +SQPG PF +G ++ A+ST+ W P V G D + K +L+ LAVYW+ S+ + E V ++ +E LE K I +GE K H+++L+PV A + L+ + DR Q + Q E+G + L+D Q + + + L + +Y K +P+ V + DP AW FA ++ ++ E R S+ RR R+ Y+ L+ K + Sbjct: 33 GDVKLRNLELRREALDQLKLPMNVEEGHLGQLTLSIPWSRLGSAPVKVFIEDVYLLAAPKEDAEWDEEEEQRRKQVVKIEKLESAELLKD--RNDEAANSEEQKKNASLQTSL--------VEKIIDNLQITMKNIHVRYEDSISQPGHPFALGITLKEFSAISTNKEWTPTYVQ-------------------------------------------------GTDGVTHKLATLDSLAVYWD-----TEASLLGTGREAEVEGVTVASHDEM------LEKF--KDMIVKGEESNKPNHQFILKPVSGVAKLELNKLGGTDRPQVKAGLQFDEIGLV---LDDDQYRDALMMVDYLHYFTRHQEYKKLQPKGVSPKEDPRAWLKFAGDAILSKIH-ERNRRWSWEYFKERRDDRIRYIELFKKKK 383
BLAST of mRNA_H-elongata_contig10031.34.1 vs. uniprot
Match: A0A2I0RJ04_9PEZI (Vacuolar protein sorting-associated protein 13a n=1 Tax=Cercospora zeina TaxID=348901 RepID=A0A2I0RJ04_9PEZI) HSP 1 Score: 134 bits (336), Expect = 4.130e-28 Identity = 113/436 (25.92%), Postives = 182/436 (41.74%), Query Frame = 1 Query: 1 GYLVLEDMHIKKSLLDTLELPLALVHGVIGRLEISIPWTNLGREPIVVAVDQVFLVVEPKFD--WDAEAVKRREQAAKSARIATAEIFRNSPLDDVAPSSSAGPSRASWGSGLQKWVTDRVITRIVGSLQIHVRDVHVRYEDHLSQPGAPFYVGAMIESLHAVSTSGAWQPQTVGLPKGSGSRSSTASLSSSRTEARRRNGVKVLQGASEEDTASEGQGVAGSGGRDRLVKKELSLNQLAVYWNPAEDGNPCSMHLSDIPVEQAEVVISRREEGTTDEGGLEAVAGKPSIARGEKLRHRYLLEPVDVKAHVALSVDPMDR-SQPRCQAQVEVGAMSGRLEDFQVQGGMCLGAALARYEEIGKYSKYRPQVPVRVDPSAWWHFALRVVVERLRAEGGWRQSFPDIVRRRRMRLEYMPLWVKSRGWGTTRDEQTSSYD 1299 G + L+D+ +K+ LD LPL +V G I L + IPW+NL +P+ + ++ VFL+ PK D +DA +RR A K ++ +AE+ + + ++ Q+ T + T IV ++QI V++VHVRYED LS PG PF G ++ L AVST W+P V G K +L LAVYW+ D + + + + E G EAV H+++L+PV +A L +D + +P+ +A++ + L+D Q + + L + +Y K +P + DP AW FA + V++R+ + R S+ RR R Y+ L+ K + E+TS D Sbjct: 34 GDVKLKDLELKREALDQFHLPLNVVEGHISSLVLKIPWSNLRGQPVRITIEDVFLLAAPKEDQEYDAAEEERRAHAVKMEKLDSAELLKERSTEGMSQEEQQK----------QQSFTAALTTTIVDNVQIQVKNVHVRYEDALSDPGHPFAAGMTLQELSAVSTDEHWKPTWVA-------------------------------------------------GTSTTTHKLATLGSLAVYWDT--DATLLGTGTGEQKDIDHDATMEKFREMIVKSGDSEAVKD-----------HQFILKPVSGRA--GLEMDKTGKYDRPKMKARLLFNELGFLLDDTQYRDALMLVDLFHYFIRHQEYRKLQPSKAPKEDPRAWLQFAGKAVLDRIHDKNK-RWSWAYFAERRDDRRRYIDLFQKKKKEERLTPEETSDLD 394
BLAST of mRNA_H-elongata_contig10031.34.1 vs. uniprot
Match: A0A2T2N6H6_CORCC (Vacuolar protein sorting-associated protein n=1 Tax=Corynespora cassiicola Philippines TaxID=1448308 RepID=A0A2T2N6H6_CORCC) HSP 1 Score: 133 bits (335), Expect = 5.430e-28 Identity = 110/439 (25.06%), Postives = 197/439 (44.87%), Query Frame = 1 Query: 1 GYLVLEDMHIKKSLLDTLELPLALVHGVIGRLEISIPWTNLGREPIVVAVDQVFLVVEPKFD--WDAEAVKRREQAAKSARIATAEIFRNSPLDDVAPSSSAGPSRASWGSGLQKWVTDRVITRIVGSLQIHVRDVHVRYEDHLSQPGAPFYVGAMIESLHAVSTSGAWQPQTVGLPKGSGSRSSTASLSSSRTEARRRNGVKVLQGASEEDTASEGQGVAGSGGRDRLVKKELSLNQLAVYWNPAEDGNPCSMHLSDIPVEQAEVVISRREEGTTDEGGLEAVAGKPSIARGEKLR---HRYLLEPVDVKAHVALSVDPMDRS-QPRCQAQVEVGAMSGRLEDFQVQGGMCLGAALARYEEIGKYSKYRPQVPVRVDPSAWWHFALRVVVERLRAEGGWRQSFPDIVRRRRMRLEYMPLWVKSRGWGTTRDEQTSSYD 1299 G + L D+ +++ LD L LPL +V G +G L +SIPW+NL +P+ V ++ VFL+ PK D +DAE +RR A K ++ +AE+ + + ++P + T ++T IV ++QI V+++H+RYED +S PG PF +G + A+ST W+P + QG A S K +L LAVYW+ S+ + + S+ E+ ++ V G I RGE H+++L+P+ +A L +D ++ +P+ +A++ + +++ Q + + L + +Y K++P+ + DP+ W +FA + V++++ E R S+ RR R+ Y+ L+ K + T + D Sbjct: 33 GDVKLRDLELRREALDQLHLPLNVVEGHLGSLTLSIPWSNLRGKPLKVNIEDVFLLAAPKEDAEYDAEEEERRAHAVKMEKLDSAELLKERNTEGMSPEEQQK----------NQSFTASLVTAIVDNVQITVKNIHIRYEDSISDPGHPFALGITLADFSAISTDENWKPTFI-------------------------------------------QGTASS------THKLATLGSLAVYWD-----TDASL------IGTGKGSQSKDEQHIDHADFIDKVRGM--IVRGENPELGDHQFILKPISGRA--GLEMDKTGKADRPKMKARLLFDELGFIIDEDQYRDALMLVDLFHYFIRHQEYKKFQPKSSPKEDPAGWLYFAGKAVLDKIH-ERNRRWSWGYFKERRDDRIRYIELFKKKKREETLSSTEAEDLD 396
BLAST of mRNA_H-elongata_contig10031.34.1 vs. uniprot
Match: A0A0F4ZAR1_9PEZI (Uncharacterized protein n=1 Tax=Thielaviopsis punctulata TaxID=72032 RepID=A0A0F4ZAR1_9PEZI) HSP 1 Score: 133 bits (335), Expect = 5.500e-28 Identity = 106/431 (24.59%), Postives = 189/431 (43.85%), Query Frame = 1 Query: 1 GYLVLEDMHIKKSLLDTLELPLALVHGVIGRLEISIPWTNLGREPIVVAVDQVFLVVEPKFD--WDAEAVKRREQAAKSARIATAEIFRNSPLDDVAPSSSAGPSRASWGSGLQKWVTDRVITRIVGSLQIHVRDVHVRYEDHLSQPGAPFYVGAMIESLHAVSTSGAWQPQTVGLPKGSGSRSSTASLSSSRTEARRRNGVKVLQGASEEDTASEGQGVAGSGGRDRLVKKELSLNQLAVYWNPAED-----------GNPCSMHLSDIPVEQAEVVISRREEGTTDEGGLEAVAGKPSIARGEKLRHRYLLEPVDVKAHVALSVDPMDRSQPRCQAQVEVGAMSGRLEDFQVQGGMCLGAALARYEEIGKYSKYRPQVPVRVDPSAWWHFALRVVVERLRAEGGWRQSFPDIVRRRRMRLEYMPLWVKS 1254 G + L D+ +++ LD L+LP+ + G +G L + IPW+NL P+ + ++ VFL+ PK + +DA+ +R Q K R+ +AE+ R + ++ T +IT+I+ +LQIH++++H+RYED +S PG PF +G ++ A++T W+P V SR +T L+ SL L+VYWN D + HLS + E+ +++I+ + + +L H+Y+L PV +A + L D PR A + + ++D Q + G+ + + +Y +++P+VPV D AW+ FA V+ ++ E + ++ +RR R+ Y+ L+ KS Sbjct: 33 GDVKLRDLELRREALDQLKLPINVFAGHLGELTLVIPWSNLRGSPVKIMIEDVFLLASPKEESNYDADEEDQRRQRLKMERLESAEMLRERNREGMSQEEEQKTQS----------FTQSLITKIMDNLQIHIKNIHIRYEDSISAPGHPFALGVTLQEFSAITTDAYWKPMFV-----QDSRDTTHKLA--------------------------------------------SLEALSVYWNTDTDLMGTGRDFDPDRDELLPHLSFV--EKCKLMIATHDNAS-------------------RLNHQYILRPVTGQAKLRLDKTG-DTHIPRFHADLLFDEIGLVIDDDQYRDGLMMVDLFHYFTRRQEYLRHQPKVPVMTDARAWFRFAGNAVLNKIH-ERNRKWTWDYFRKRRDNRVRYISLFKKS 381
BLAST of mRNA_H-elongata_contig10031.34.1 vs. uniprot
Match: A0A6A5YCN1_9PEZI (Vacuolar protein sorting-associated protein n=1 Tax=Saccharata proteae CBS 121410 TaxID=1314787 RepID=A0A6A5YCN1_9PEZI) HSP 1 Score: 133 bits (334), Expect = 7.160e-28 Identity = 105/422 (24.88%), Postives = 194/422 (45.97%), Query Frame = 1 Query: 1 GYLVLEDMHIKKSLLDTLELPLALVHGVIGRLEISIPWTNLGREPIVVAVDQVFLVVEPKFD--WDAEAVKRREQAAKSARIATAEIFRNSPLDDVAPSSSAGPSRASWGSGLQKWVTDRVITRIVGSLQIHVRDVHVRYEDHLSQPGAPFYVGAMIESLHAVSTSGAWQPQTVGLPKGSGSRSSTASLSSSRTEARRRNGVKVLQGASEEDTASEGQGVAGSGGRDRLVKKELSLNQLAVYWNPAEDGNPCSMHLSDIPVEQAEVVISRREEGTTDEGGLEAVAGKPSIARGEKLRHRYLLEPVDVKAHVALSVDPMDRS-QPRCQAQVEVGAMSGRLEDFQVQGGMCLGAALARYEEIGKYSKYRPQVPVRVDPSAWWHFALRVVVERLRAEGGWRQSFPDIVRRRRMRLEYMPLWVKSR 1257 G + L D+ +++ LD L LPL +V G +G+L +SIPW+NL +P+ V ++ VFL+ P+ D +DA+ +RR A K ++ +AE+ R + ++P + T ++ IV +LQ+ V++VHVRYED +S PG PF +G ++ L AVST W+P + ++T++ K +L LA+YW+ + S + E + ++ E T + V G S H+++L+PV +A L +D ++ +P+ +A++ + +++ Q + + L + +Y K++P+ V+ DP AW FA + V++++ + R ++ RR R+ Y+ L+ K + Sbjct: 33 GDVKLRDLELRREALDQLHLPLNVVQGHLGQLTLSIPWSNLRGKPVHVQIEDVFLLAAPREDAEYDADEEERRSHAVKMEKLDSAELLRERNTEGMSPEEQQK----------NQTFTASLVAAIVDNLQVSVKNVHVRYEDSISDPGHPFALGLTLDELSAVSTDENWKPTFI------------------------------------QNTSAS-------------THKLATLGSLAIYWD-----TDSKLLCSGVGTEGGKYDLAHGEFVETLRNMI--VKGDSSTVAD----HQFILKPVSGRA--GLEMDKTGKTDRPKVKARLLFDELGFIIDEDQYRDALMLVDLFHYFIRHQEYKKFQPRSAVKEDPRAWLQFAGKAVLDKIH-DRNRRWTWDFFKERRDDRIRYIELFKKKK 381
BLAST of mRNA_H-elongata_contig10031.34.1 vs. uniprot
Match: A0A7S1CBN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBN4_9STRA) HSP 1 Score: 122 bits (307), Expect = 9.090e-28 Identity = 69/167 (41.32%), Postives = 94/167 (56.29%), Query Frame = 1 Query: 1 GYLVLEDMHIKKSLLDTLELPLALVHGVIGRLEISIPWTNLGREPIVVAVDQVFLVVEPKFDWDAEAVKRREQAAKSARIATAEIFRNSPLDDVAPSSSAGPSRASWGSGLQKWVTDRVITRIVGSLQIHVRDVHVRYEDHLSQPGAPFYVGAMIESLHAVSTSGAW 501 GY+VL D+ +K + LD L+LPL +V G +GRLE IPW N G + V VD+VF+V E K+DW E ++ A K R+ AE + D S+ AG S+AS R+ T+IV +LQ+ +R +HVR ED S P PF G +E L A ST+ W Sbjct: 33 GYVVLNDLELKPTALDFLQLPLRVVRGYVGRLEFQIPWGNPGSKQSTVKVDEVFIVAETKYDWTPEELRAWRDADKRRRLEAAEAYEEKRRD----SAGAGGSKASEAEAAG--FVGRLATKIVENLQVTIRGLHVRVEDRRSNPERPFAFGVTLEGLVARSTNARW 193 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10031.34.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10031.34.1 >prot_H-elongata_contig10031.34.1 ID=prot_H-elongata_contig10031.34.1|Name=mRNA_H-elongata_contig10031.34.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=820bp MHIKKSLLDTLELPLALVHGVIGRLEISIPWTNLGREPIVVAVDQVFLVVback to top mRNA from alignment at H-elongata_contig10031:176..7951- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10031.34.1 ID=mRNA_H-elongata_contig10031.34.1|Name=mRNA_H-elongata_contig10031.34.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7776bp|location=Sequence derived from alignment at H-elongata_contig10031:176..7951- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10031:176..7951- >mRNA_H-elongata_contig10031.34.1 ID=mRNA_H-elongata_contig10031.34.1|Name=mRNA_H-elongata_contig10031.34.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4920bp|location=Sequence derived from alignment at H-elongata_contig10031:176..7951- (Himanthalia elongata Himel1 dioecious)back to top |