mRNA_H-elongata_contig10023.27.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig10023.27.1 vs. uniprot
Match: A0A6H5KIS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS6_9PHAE) HSP 1 Score: 345 bits (884), Expect = 4.940e-112 Identity = 185/397 (46.60%), Postives = 242/397 (60.96%), Query Frame = 1 Query: 1 MIQAEILKLEGNGAIEESTSEWAANCSTVRKGDGTVRVVQDFRGLNARLKSQSGDLGDLMHIFDEMGNMSCFSSCDLASGLLQLGIHEDDSHLTAVREADGKLWQYVRCGFGLKTVPSAFANYAGGRLMPVKCLGVRNWLDDITIPSQTARGHWPLLRATFQCLREDKLTVNLQKSKFCQPELEFVGMVVDRQETRPVPSKIDAVTQLSRPIIVEEARVLLGMTEYLRQFVPNYSTLVAPISDCFRDPRFRSKLSRRMSVPRGKEQTRAFLVLRECLASPPILARPDWGADVQLHTDASETGARAVLTQQQGSPALEKVIAYGSRRWSRTDALRSQTDRECMGVMWAVAKFQPYLWGRPFTLITDCSALIWLLKSQALSPKYHRWALRLVEHNMTLK 1191 MI+AEI +L G I +S S WAA C V+K DGT+R+ D+R LN L S SG LGD+ IFD + F+ DLASG Q+ I E D + TA R+ADG LW++ R GFGL +P+AF L + GV +WLDDI I S + H L L L+VN K F EF+GM++D P PSK+DA+ ++ RP VEE R LG+T YLRQFVPNYS AP+++ R+ F SK +R++ +P + AF LRE LASP +LA PD +LHTDAS G A L Q + + +A+ + R+ +TDA R T+RECMGV+WAV F+PYL GR F L+TDCSAL WL +S+ L PK HRWALRL+E++M L+ Sbjct: 31 MIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCPFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQT--IDGVTRAVAFANHRFLQTDARRGLTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELE 423
BLAST of mRNA_H-elongata_contig10023.27.1 vs. uniprot
Match: A0A6H5JQV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV6_9PHAE) HSP 1 Score: 348 bits (892), Expect = 1.330e-110 Identity = 187/397 (47.10%), Postives = 243/397 (61.21%), Query Frame = 1 Query: 1 MIQAEILKLEGNGAIEESTSEWAANCSTVRKGDGTVRVVQDFRGLNARLKSQSGDLGDLMHIFDEMGNMSCFSSCDLASGLLQLGIHEDDSHLTAVREADGKLWQYVRCGFGLKTVPSAFANYAGGRLMPVKCLGVRNWLDDITIPSQTARGHWPLLRATFQCLREDKLTVNLQKSKFCQPELEFVGMVVDRQETRPVPSKIDAVTQLSRPIIVEEARVLLGMTEYLRQFVPNYSTLVAPISDCFRDPRFRSKLSRRMSVPRGKEQTRAFLVLRECLASPPILARPDWGADVQLHTDASETGARAVLTQQQGSPALEKVIAYGSRRWSRTDALRSQTDRECMGVMWAVAKFQPYLWGRPFTLITDCSALIWLLKSQALSPKYHRWALRLVEHNMTLK 1191 MI+AEI +L G I +S S WAA C V+K DGT+R+ D+R LN L S SG LGD+ IFD + F+ DLASG Q+ I E D + TA R+ADG LW++ R GFGL +P+AF L + GV +WLDDI I S + H L L L+VN K F EF+GM++D P PSK+DA+ ++ RP VEE R LG+T YLRQFVPNYS AP+++ R+ F SK +R++ +P + AF LRE LASP +LA PD +LHTDAS G A L Q + + +A+ S R+S+TDA R T+RECMGV+WAV F+PYL GR F L+TDCSAL WL +S+ L PK HRWALRL+E++M L+ Sbjct: 171 MIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQT--IDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELE 563
BLAST of mRNA_H-elongata_contig10023.27.1 vs. uniprot
Match: A0A6H5KFK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK7_9PHAE) HSP 1 Score: 348 bits (892), Expect = 2.000e-107 Identity = 187/397 (47.10%), Postives = 243/397 (61.21%), Query Frame = 1 Query: 1 MIQAEILKLEGNGAIEESTSEWAANCSTVRKGDGTVRVVQDFRGLNARLKSQSGDLGDLMHIFDEMGNMSCFSSCDLASGLLQLGIHEDDSHLTAVREADGKLWQYVRCGFGLKTVPSAFANYAGGRLMPVKCLGVRNWLDDITIPSQTARGHWPLLRATFQCLREDKLTVNLQKSKFCQPELEFVGMVVDRQETRPVPSKIDAVTQLSRPIIVEEARVLLGMTEYLRQFVPNYSTLVAPISDCFRDPRFRSKLSRRMSVPRGKEQTRAFLVLRECLASPPILARPDWGADVQLHTDASETGARAVLTQQQGSPALEKVIAYGSRRWSRTDALRSQTDRECMGVMWAVAKFQPYLWGRPFTLITDCSALIWLLKSQALSPKYHRWALRLVEHNMTLK 1191 MI+AEI +L G I +S S WAA C V+K DGT+R+ D+R LN L S SG LGD+ IFD + F+ DLASG Q+ I E D + TA R+ADG LW++ R GFGL +P+AF L + GV +WLDDI I S + H L L L+VN K F EF+GM++D P PSK+DA+ ++ RP VEE R LG+T YLRQFVPNYS AP+++ R+ F SK +R++ +P + AF LRE LASP +LA PD +LHTDAS G A L Q + + +A+ S R+S+TDA R T+RECMGV+WAV F+PYL GR F L+TDCSAL WL +S+ L PK HRWALRL+E++M L+ Sbjct: 173 MIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQT--IDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELE 565
BLAST of mRNA_H-elongata_contig10023.27.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE) HSP 1 Score: 348 bits (892), Expect = 3.450e-104 Identity = 187/397 (47.10%), Postives = 243/397 (61.21%), Query Frame = 1 Query: 1 MIQAEILKLEGNGAIEESTSEWAANCSTVRKGDGTVRVVQDFRGLNARLKSQSGDLGDLMHIFDEMGNMSCFSSCDLASGLLQLGIHEDDSHLTAVREADGKLWQYVRCGFGLKTVPSAFANYAGGRLMPVKCLGVRNWLDDITIPSQTARGHWPLLRATFQCLREDKLTVNLQKSKFCQPELEFVGMVVDRQETRPVPSKIDAVTQLSRPIIVEEARVLLGMTEYLRQFVPNYSTLVAPISDCFRDPRFRSKLSRRMSVPRGKEQTRAFLVLRECLASPPILARPDWGADVQLHTDASETGARAVLTQQQGSPALEKVIAYGSRRWSRTDALRSQTDRECMGVMWAVAKFQPYLWGRPFTLITDCSALIWLLKSQALSPKYHRWALRLVEHNMTLK 1191 MI+AEI +L G I +S S WAA C V+K DGT+R+ D+R LN L S SG LGD+ IFD + F+ DLASG Q+ I E D + TA R+ADG LW++ R GFGL +P+AF L + GV +WLDDI I S + H L L L+VN K F EF+GM++D P PSK+DA+ ++ RP VEE R LG+T YLRQFVPNYS AP+++ R+ F SK +R++ +P + AF LRE LASP +LA PD +LHTDAS G A L Q + + +A+ S R+S+TDA R T+RECMGV+WAV F+PYL GR F L+TDCSAL WL +S+ L PK HRWALRL+E++M L+ Sbjct: 695 MIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQT--IDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELE 1087
BLAST of mRNA_H-elongata_contig10023.27.1 vs. uniprot
Match: A0A6H5K9Z4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Z4_9PHAE) HSP 1 Score: 317 bits (812), Expect = 3.230e-100 Identity = 172/369 (46.61%), Postives = 222/369 (60.16%), Query Frame = 1 Query: 43 IEESTSEWAANCSTVRKGDGTVRVVQDFRGLNARLKSQSGDLGDLMHIFDEMGNMSCFSSCDLASGLLQLGIHEDDSHLTAVREADGKLWQYVRCGFGLKTVPSAFANYAGGRLMPVKCLGVRNWLDDITIPSQTARGHWPLLRATFQCLREDKLTVNLQKSKFCQPELEFVGMVVDRQETRPVPSKIDAVTQLSRPIIVEEARVLLGMTEYLRQFVPNYSTLVAPISDCFRDPRFRSKLSRRMSVPRGKEQTRAFLVLRECLASPPILARPDWGADVQLHTDASETGARAVLTQQQGSPALEKVIAYGSRRWSRTDALRSQTDRECMGVMWAVAKFQPYLWGRPFTLITDCSALIWLLKSQALSPKYH 1149 I +S S WAA C V+K DGT+R+ D+R LN L S SGDLGD+ IFD + F+ DLASG Q+ I E D + TA R+ADG LW++ R GFGL +P+AF L + GV +WLDDI I S + H L L L+VN K F EF+GM++D P PSK+DA+ ++ RP VEE R LG+T YLRQFVPNYS AP+++ R+ F SK +R++ +P + AF LRE LASP +LA PD +LHTDAS G A L Q + + +A+ S R+S+TDA R T+RECMGV+WAV F+PYL GR F L+TDCSAL WL +S+ L PK H Sbjct: 2 IRQSMSPWAAQCLRVKK-DGTLRLCIDWRELNTLLVSDSGDLGDMQTIFDTLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQT--IDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLH 365
BLAST of mRNA_H-elongata_contig10023.27.1 vs. uniprot
Match: A0A6H5LHQ7_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LHQ7_9PHAE) HSP 1 Score: 323 bits (829), Expect = 5.210e-98 Identity = 177/402 (44.03%), Postives = 236/402 (58.71%), Query Frame = 1 Query: 4 IQAEILKLEGN-----GAIEESTSEWAANCSTVRKGDGTVRVVQDFRGLNARLKSQSGDLGDLMHIFDEMGNMSCFSSCDLASGLLQLGIHEDDSHLTAVREADGKLWQYVRCGFGLKTVPSAFANYAGGRLMPVKCLG-VRNWLDDITIPSQTARGHWPLLRATFQCLREDKLTVNLQKSKFCQPELEFVGMVVDRQETRPVPSKIDAVTQLSRPIIVEEARVLLGMTEYLRQFVPNYSTLVAPISDCFRDPRFRSKLSRRMSVPRGKEQTRAFLVLRECLASPPILARPDWGADVQLHTDASETGARAVLTQQQGSPALEKVIAYGSRRWSRTDALRSQTDRECMGVMWAVAKFQPYLWGRPFTLITDCSALIWLLKSQALSPKYHRWALRLVEHNMTLK 1191 +QAEI+ + + G I STS W + S V+K DG+ RV D+R LNA K SG +G L + + + F+ DL S QL I E D H TA R+A G+L+++ RCGFGL T+P+ F+ + G L P + G V WLDDI + S T H L+ F L+ +V+ +KS FC E+EF+G +V R RP PSKI AV +L P V E R LG+ YLR FVP++STL API+D RD F SK +R VP G Q AF + + L + P+LA PDW LHTDASE A AVLTQ + E + Y S R++R + S DRE +GV++ + +F YL R FTL+TDC+AL WL SQ LS K HRW+LRL++ ++ LK Sbjct: 131 VQAEIVNDQADLWLETGVIRYSTSAWCSRTSIVKKKDGSNRVTIDYRPLNAVTKKDSGGIGTLATMHHRIKGSNFFTLLDLPSAYHQLSIKEADRHKTAFRDARGRLYEFTRCGFGLTTIPAVFSAHLGDTLRPTENKGGVERWLDDILLHSATLEEHMALIEEVFDLLQGVGYSVHFKKSMFCMSEVEFLGAMVGRSGVRPAPSKIRAVQELEMPATVGEVRAFLGLAGYLRGFVPDFSTLTAPITDLLRDKAFSSKRARNRRVPWGAAQIEAFQAVIKALVTHPVLAAPDWHLPFTLHTDASELAAGAVLTQPVEN--REAPLGYASHRFTRAEEKLSANDREVLGVLYGIEQFHTYLQHRRFTLVTDCAALTWLFTSQNLSSKMHRWSLRLMQFDIDLK 530
BLAST of mRNA_H-elongata_contig10023.27.1 vs. uniprot
Match: A0A6H5JF70_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF70_9PHAE) HSP 1 Score: 312 bits (800), Expect = 2.050e-97 Identity = 166/385 (43.12%), Postives = 225/385 (58.44%), Query Frame = 1 Query: 37 GAIEESTSEWAANCSTVRKGDGTVRVVQDFRGLNARLKSQSGDLGDLMHIFDEMGNMSCFSSCDLASGLLQLGIHEDDSHLTAVREADGKLWQYVRCGFGLKTVPSAFANYAGGRLMPVKCLGVRNWLDDITIPSQTARGHWPLLRATFQCLREDKLTVNLQKSKFCQPELEFVGMVVDRQETRPVPSKIDAVTQLSRPIIVEEARVLLGMTEYLRQFVPNYSTLVAPISDCFRDPRFRSKLSRRMSVPRGKEQTRAFLVLRECLASPPILARPDWGADVQLHTDASETGARAVLTQQQGSPALEKVIAYGSRRWSRTDALRSQTDRECMGVMWAVAKFQPYLWGRPFTLITDCSALIWLLKSQALSPKYHRWALRLVEHNMTLK 1191 G STS W + V K DGT R+ D+R LN +K SG LGD+ + D M FSS DLA QL + E D H TA R+ G+L + RC FG+ T+P+ F+ G L + G+ WLDDI + ++T H+ LL L++ T + KS+F PELEF+G++V R TRP PSK+ AV ++ P V E R LG+ YLR FVPN+S + AP+SD R+ F SK +R V G Q A++ L E L + P+L P+W LHTDAS A +VLTQQ + E + Y S+R SR++ S DRE +GV++A+ F+ YL R FTLITDC+AL+WL SQ LS K HRWAL+++ ++M LK Sbjct: 116 GTFRLSTSSWCSRIVPVPKSDGTYRICIDYRDLNKLIKKDSGGLGDITGMLDRMKGSKFFSSLDLAQAYHQLELEETDKHKTAFRDPTGRLLESNRCAFGITTIPAVFSATLGDDLRELLGKGLEKWLDDIALHTKTLEEHFVLLEKVLTILKQKGYTGHFVKSEFLLPELEFLGVMVGRDGTRPAPSKVKAVQEMELPSTVGELRSFLGLANYLRGFVPNFSAIAAPLSDILRNKEFSSKRARNKRVVMGPPQIEAYMKLVEKLTTYPVLVLPNWLEPFTLHTDASLIAAGSVLTQQVEN--REAPVGYASKRLSRSEEKLSSNDREVLGVLYALEHFKVYLQHRQFTLITDCAALMWLFTSQKLSSKMHRWALKMMAYDMVLK 498
BLAST of mRNA_H-elongata_contig10023.27.1 vs. uniprot
Match: A0A6H5KBF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF4_9PHAE) HSP 1 Score: 315 bits (806), Expect = 3.220e-94 Identity = 175/398 (43.97%), Postives = 237/398 (59.55%), Query Frame = 1 Query: 1 MIQAEILKLEGNGAIEESTSEWAANCSTVRKGDGTVRVVQDFRGLNARLKSQSGDLGDLMHIFDEMGNMSCFSSCDLASGLLQLGIHEDDSHLTAVREADGKLWQYVRCGFGLKTVPSAFANYAGGRLMPVKCLGVRNWLDDITIPSQTARGHWPLLRATFQCLREDKLTVNLQKSKFCQPELEFVGMVVDRQETRPVPSKIDAVTQLSRPIIVEEARVLLGMTEYLRQFVPNYSTLVAPISDCFRDPRFRSKLSRRMSVPRGKEQTRAFLVLRECLASPPILARPDWGADVQLHTDASETGARAVLTQQ-QGSPALEKVIAYGSRRWSRTDALRSQTDRECMGVMWAVAKFQPYLWGRPFTLITDCSALIWLLKSQALSPKYHRWALRLVEHNMTLK 1191 MI+AEI +L G I S S WAA C V+K DGT+R+ D+R LN L + SG LGD+ IFD + F+ DLASG Q+ I E D + TA R+ADG L+++ R GFGL +PSAF L V GV +WLDDI + ++T H L LR L+VN K F EF+GM++D P PSK++A+ + RP VE+ R L+ AP++D R+ F SK +R++ + G+ + AF LR+CLASP +LA PD A +LH+DAS GA A L Q G+P ++IA+ S ++SRTDA R T+RECMGV+W V F+PYL GR F ++TDCSAL WL +S+ L PK HRWALRL+E+++ L+ Sbjct: 333 MIRAEIQQLLDRGIIRPSMSPWAAQCLCVKKKDGTMRLCIDWRVLNKLLVADSGGLGDMQTIFDGLKGKRYFTQIDLASGFHQIEIAEKDRYKTAFRDADGMLYEFTRAGFGLTVLPSAFTRRVKSALGIVD--GVFSWLDDILVANETWEEHLAALVLVLTRLRAAGLSVNFPKCIFGASSQEFLGMIIDATGMHPAPSKLEAIANMPRPQTVEDLRTLVA----------------APLTDILRNKDFASKRARKLPIQWGQAEEHAFHHLRQCLASPTVLAFPDPNAPFELHSDASSVGAGATLLQTIDGTP---RIIAFASHKFSRTDARRGPTERECMGVLWGVDHFKPYLAGRQFKVVTDCSALTWLFRSRELCPKLHRWALRLMEYDIGLE 709
BLAST of mRNA_H-elongata_contig10023.27.1 vs. uniprot
Match: A0A6H5KHG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG6_9PHAE) HSP 1 Score: 300 bits (767), Expect = 1.500e-87 Identity = 156/398 (39.20%), Postives = 231/398 (58.04%), Query Frame = 1 Query: 1 MIQAEILKLEGNGAIEESTSEWAANCSTVRKGDGTVRVVQDFRGLNARLKSQSGDLGDLMHIFDEMGNMSCFSSCDLASGLLQLGIHEDDSHLTAVREADGKLWQYVRCGFGLKTVPSAFANYAGGRLMPVKCLG-VRNWLDDITIPSQTARGHWPLLRATFQCLREDKLTVNLQKSKFCQPELEFVGMVVDRQETRPVPSKIDAVTQLSRPIIVEEARVLLGMTEYLRQFVPNYSTLVAPISDCFRDPRFRSKLSRRMSVPRGKEQTRAFLVLRECLASPPILARPDWGADVQLHTDASETGARAVLTQQQGSPALEKVIAYGSRRWSRTDALRSQTDRECMGVMWAVAKFQPYLWGRPFTLITDCSALIWLLKSQALSPKYHRWALRLVEHNMTLK 1191 ++ + + KL G +E + S+W + S K DG R+ D+R LN SG +G+L + D + F+ DL Q+ I D TA R+A G+L+Q+ RC FGL T+P+ F+ G L P + G + WLDDI I S+T H + + L+E +V+ KS FC E+EF+G++V R RP PSKI A+T++ +P V R +GM +LR FV ++S +VAP++D R+ F +K +R +++P G+EQ A + L SPP+L PDW LHTDASE A AVLTQ + I +GS RW++++A R+ TDRE ++ + F+ YL +PFTL+TDCSA+ WL +SQ LS +R+ALR++E MTL+ Sbjct: 829 ILNSTVDKLHEQGIVEYADSQWCSRVSLQPKKDGGTRMTLDYRPLNNLTVKNSGGIGNLASMHDRVRKSKWFTLLDLPQAYHQIPIKPSDRPKTAFRDARGRLYQFTRCSFGLTTIPAVFSALLGDTLRPTESKGGIERWLDDILIHSETLEEHLKKIDEVLKLLQEAGFSVHFDKSLFCMQEVEFLGVMVGRSGVRPPPSKIKAITEMEKPTTVGGLRSFVGMANFLRDFVKDFSAIVAPLTDILRNKDFSTKRARNLAIPWGEEQDAAHDAIIRALVSPPVLLPPDWELPFTLHTDASERAAGAVLTQVVEDH--DTAIGFGSHRWTQSEAKRAPTDREVRAALFGLEHFRIYLLHQPFTLVTDCSAITWLFQSQHLSSTMYRYALRMMEFTMTLQ 1224
BLAST of mRNA_H-elongata_contig10023.27.1 vs. uniprot
Match: A0A6H5KGF2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF2_9PHAE) HSP 1 Score: 280 bits (715), Expect = 1.040e-84 Identity = 162/397 (40.81%), Postives = 216/397 (54.41%), Query Frame = 1 Query: 1 MIQAEILKLEGNGAIEESTSEWAANCSTVRKGDGTVRVVQDFRGLNARLKSQSGDLGDLMHIFDEMGNMSCFSSCDLASGLLQLGIHEDDSHLTAVREADGKLWQYVRCGFGLKTVPSAFANYAGGRLMPVKCLGVRNWLDDITIPSQTARGHWPLLRATFQCLREDKLTVNLQKSKFCQPELEFVGMVVDRQETRPVPSKIDAVTQLSRPIIVEEARVLLGMTEYLRQFVPNYSTLVAPISDCFRDPRFRSKLSRRMSVPRGKEQTRAFLVLRECLASPPILARPDWGADVQLHTDASETGARAVLTQQQGSPALEKVIAYGSRRWSRTDALRSQTDRECMGVMWAVAKFQPYLWGRPFTLITDCSALIWLLKSQALSPKYHRWALRLVEHNMTLK 1191 MI+AEI +L G I +S S WAA C V+K DGT+R+ D+R LN L S SG L D+ IFD + F+ DLASG Q+ I E D + TA R+ADG LW++ R GFGL +P+AF L + GV +WLDDI I S + + H AT + L L EF+GM++D P PSK+DA+ ++ RP VEE R LG+T Y RQ VPNYS AP+++ R+ F SK +R++ +P G A L Q + + +A+ S R+S+TDA R T+RECMGV+WAV F+PYL GR F L+TDCSAL WL +S+ L PK HRWALRL+E++M L+ Sbjct: 96 MIRAEIQQLVDRGVIRQSMSAWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLADMQTIFDGLKGKKYFTQVDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWQEHL----ATLTLVLNRLLAAGLS---------EFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYFRQVVPNYSLTAAPLTNILRNKAFASKRARKLHIP-------------------------------------CTLGVGASLMQT--IDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELE 438 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10023.27.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10023.27.1 >prot_H-elongata_contig10023.27.1 ID=prot_H-elongata_contig10023.27.1|Name=mRNA_H-elongata_contig10023.27.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=398bp MIQAEILKLEGNGAIEESTSEWAANCSTVRKGDGTVRVVQDFRGLNARLKback to top mRNA from alignment at H-elongata_contig10023:4686..5879- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10023.27.1 ID=mRNA_H-elongata_contig10023.27.1|Name=mRNA_H-elongata_contig10023.27.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1194bp|location=Sequence derived from alignment at H-elongata_contig10023:4686..5879- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10023:4686..5879- >mRNA_H-elongata_contig10023.27.1 ID=mRNA_H-elongata_contig10023.27.1|Name=mRNA_H-elongata_contig10023.27.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2388bp|location=Sequence derived from alignment at H-elongata_contig10023:4686..5879- (Himanthalia elongata Himel1 dioecious)back to top |