Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Model size | 174 |
| Cds size | 174 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929544.5855384-CDS-H-elongata_contig100206:1168..1227 | 1622929544.5855384-CDS-H-elongata_contig100206:1168..1227 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig100206 1169..1227 + |
| 1691679062.6538885-CDS-H-elongata_contig100206:1168..1227 | 1691679062.6538885-CDS-H-elongata_contig100206:1168..1227 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig100206 1169..1227 + |
| 1622929544.601256-CDS-H-elongata_contig100206:1248..1363 | 1622929544.601256-CDS-H-elongata_contig100206:1248..1363 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig100206 1249..1363 + |
| 1691679062.6671212-CDS-H-elongata_contig100206:1248..1363 | 1691679062.6671212-CDS-H-elongata_contig100206:1248..1363 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig100206 1249..1363 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig100206.24.1 >prot_H-elongata_contig100206.24.1 ID=prot_H-elongata_contig100206.24.1|Name=mRNA_H-elongata_contig100206.24.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=58bp
RSIRGSYSPCVYHAPRRPPVLGRLPDAPPSRSYHPGMCRRGPGPVRRRCP
SVLLVDMA back to topmRNA from alignment at H-elongata_contig100206:1169..1363+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-elongata_contig100206.24.1 ID=mRNA_H-elongata_contig100206.24.1|Name=mRNA_H-elongata_contig100206.24.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=195bp|location=Sequence derived from alignment at H-elongata_contig100206:1169..1363+ (Himanthalia elongata Himel1 dioecious)
CGTAGCATCCGTGGGTCCTATTCCCCCTGCGTTTACCATGCACCGAGACG
TCCCCCTGTGTCGGGACCGCTCCTGTGAAGCCTGGGGCGTTTACCTGATG
CCCCCCCATCCCGGAGCTACCACCCCGGGATGTGTCGTCGGGGCCCGGGG
CCAGTGAGGCGGCGCTGTCCCTCTGTCCTACTAGTGGATATGGCC back to topCoding sequence (CDS) from alignment at H-elongata_contig100206:1169..1363+ >mRNA_H-elongata_contig100206.24.1 ID=mRNA_H-elongata_contig100206.24.1|Name=mRNA_H-elongata_contig100206.24.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=348bp|location=Sequence derived from alignment at H-elongata_contig100206:1169..1363+ (Himanthalia elongata Himel1 dioecious)
CGTAGCATCCGTGGGTCCTATTCCCCCTGCGTTTACCATGCACCGAGACG
TCCCCCTGTCGTAGCATCCGTGGGTCCTATTCCCCCTGCGTTTACCATGC
ACCGAGACGTCCCCCTGTCCTGGGGCGTTTACCTGATGCCCCCCCATCCC
GGAGCTACCACCCCGGGATGTGTCGTCGGGGCCCGGGGCCAGTGAGGCGG
CGCTGTCCCTCTGTCCTACTAGTGGATATGGCCCCTGGGGCGTTTACCTG
ATGCCCCCCCATCCCGGAGCTACCACCCCGGGATGTGTCGTCGGGGCCCG
GGGCCAGTGAGGCGGCGCTGTCCCTCTGTCCTACTAGTGGATATGGCC back to top
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