mRNA_H-elongata_contig100205.23.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-elongata_contig100205.23.1 vs. uniprot
Match: D7FNG4_ECTSI (5-oxoprolinase (ATP-hydrolysing) 5-oxoprolinase (ATP-hydrolysing) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNG4_ECTSI) HSP 1 Score: 199 bits (507), Expect = 3.010e-57 Identity = 97/106 (91.51%), Postives = 98/106 (92.45%), Query Frame = 1 Query: 1 QGVLAPVEIFIPAGSLLNPSDAAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWVGCSGVHTHMTNTRITDPEILERRCP 318
+G LAPVEI IP G LLNPS AAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTW GCSGVHTHMTNTRITDPEILERR P
Sbjct: 1055 RGCLAPVEIRIPEGCLLNPSPTAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWSGCSGVHTHMTNTRITDPEILERRYP 1160
BLAST of mRNA_H-elongata_contig100205.23.1 vs. uniprot
Match: A0A7S0AIF9_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AIF9_9STRA) HSP 1 Score: 179 bits (453), Expect = 4.380e-54 Identity = 86/106 (81.13%), Postives = 91/106 (85.85%), Query Frame = 1 Query: 1 QGVLAPVEIFIPAGSLLNPSDAAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWVGCSGVHTHMTNTRITDPEILERRCP 318
QG LAPV+ IP SLLNPSD A VVGGNVLTSQRV DV+L+ F+ACAASQGCMNNLTFGD+ GYYETIAGGAGAGPTW G SGVHTH TNTRITDPEILERR P
Sbjct: 79 QGCLAPVKFVIPPNSLLNPSDDAGVVGGNVLTSQRVVDVVLRAFKACAASQGCMNNLTFGDDRFGYYETIAGGAGAGPTWEGRSGVHTHCTNTRITDPEILERRYP 184
BLAST of mRNA_H-elongata_contig100205.23.1 vs. uniprot
Match: A0A4Y2RKP5_ARAVE (5-oxoprolinase n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2RKP5_ARAVE) HSP 1 Score: 178 bits (452), Expect = 7.540e-54 Identity = 85/106 (80.19%), Postives = 92/106 (86.79%), Query Frame = 1 Query: 1 QGVLAPVEIFIPAGSLLNPSDAAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWVGCSGVHTHMTNTRITDPEILERRCP 318
QG LAPV++ IP GS+L PSD AAVVGGNVLTSQRV DVI K F+ CAASQGCMNN+TFGDE +GYYET+AGGAGAGP W G SGVHTHMTNTRITDPEILERR P
Sbjct: 85 QGCLAPVQVSIPPGSILFPSDTAAVVGGNVLTSQRVVDVIFKAFKTCAASQGCMNNITFGDERIGYYETVAGGAGAGPHWHGRSGVHTHMTNTRITDPEILERRYP 190
BLAST of mRNA_H-elongata_contig100205.23.1 vs. uniprot
Match: A0A7S4ETD8_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ETD8_CHRCT) HSP 1 Score: 176 bits (445), Expect = 3.110e-53 Identity = 86/106 (81.13%), Postives = 91/106 (85.85%), Query Frame = 1 Query: 1 QGVLAPVEIFIPAGSLLNPSDAAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWVGCSGVHTHMTNTRITDPEILERRCP 318
QG LAPV + IP SLL+PS AAVVGGNVLTSQRV DV+L+ F ACAASQGCMNNL+FGDE GYYETIAGGAGAGPTW G SGVHTHMTNTRITDPEILERR P
Sbjct: 46 QGCLAPVTVKIPHNSLLHPSATAAVVGGNVLTSQRVVDVVLRAFGACAASQGCMNNLSFGDETFGYYETIAGGAGAGPTWHGRSGVHTHMTNTRITDPEILERRYP 151
BLAST of mRNA_H-elongata_contig100205.23.1 vs. uniprot
Match: A0A7Z9HG69_9PROT (5-oxoprolinase n=1 Tax=Candidatus Lambdaproteobacteria bacterium TaxID=2035771 RepID=A0A7Z9HG69_9PROT) HSP 1 Score: 173 bits (439), Expect = 6.060e-53 Identity = 84/106 (79.25%), Postives = 90/106 (84.91%), Query Frame = 1 Query: 1 QGVLAPVEIFIPAGSLLNPSDAAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWVGCSGVHTHMTNTRITDPEILERRCP 318
QG L P+++ I GSLL PS+ AAVVGGNVLTSQR+TDVILK FRACAASQGCMNN TFG+E GYYETI GGAGAGP W G SGVHTHMTNTRITDPEILERR P
Sbjct: 1 QGCLNPIQVIIEDGSLLAPSENAAVVGGNVLTSQRITDVILKAFRACAASQGCMNNFTFGNENFGYYETIGGGAGAGPEWHGQSGVHTHMTNTRITDPEILERRYP 106
BLAST of mRNA_H-elongata_contig100205.23.1 vs. uniprot
Match: UPI0015AEE255 (5-oxoprolinase-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015AEE255) HSP 1 Score: 177 bits (448), Expect = 8.180e-53 Identity = 84/106 (79.25%), Postives = 91/106 (85.85%), Query Frame = 1 Query: 1 QGVLAPVEIFIPAGSLLNPSDAAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWVGCSGVHTHMTNTRITDPEILERRCP 318
QG LAPV++ IP G +L PSD AAVVGGNVLTSQRV DVI K F+ CAASQGCMNN+TFGDE +GYYET+AGGAGAGP W G SGVHTHMTNTRITDPEILERR P
Sbjct: 120 QGCLAPVKVLIPKGCILCPSDTAAVVGGNVLTSQRVVDVIFKAFQTCAASQGCMNNITFGDETVGYYETVAGGAGAGPHWHGRSGVHTHMTNTRITDPEILERRYP 225
BLAST of mRNA_H-elongata_contig100205.23.1 vs. uniprot
Match: A0A482VXP8_9CUCU (Hydantoinase B domain containing protein (Fragment) n=1 Tax=Asbolus verrucosus TaxID=1661398 RepID=A0A482VXP8_9CUCU) HSP 1 Score: 172 bits (436), Expect = 2.070e-52 Identity = 81/105 (77.14%), Postives = 91/105 (86.67%), Query Frame = 1 Query: 4 GVLAPVEIFIPAGSLLNPSDAAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWVGCSGVHTHMTNTRITDPEILERRCP 318
G LAPV+I +P GS+L+PSD+AAVVGGNVLTSQRV DV+LK FR CAASQGCMNN+TFG + G YET+AGG+GAGP W GCSGVHTHMTNTRITD EILERR P
Sbjct: 1 GCLAPVQIHVPKGSILDPSDSAAVVGGNVLTSQRVVDVVLKAFRVCAASQGCMNNITFGSGSWGCYETVAGGSGAGPGWHGCSGVHTHMTNTRITDVEILERRYP 105
BLAST of mRNA_H-elongata_contig100205.23.1 vs. uniprot
Match: A0A7S2EER3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EER3_9STRA) HSP 1 Score: 173 bits (439), Expect = 2.590e-52 Identity = 84/106 (79.25%), Postives = 89/106 (83.96%), Query Frame = 1 Query: 1 QGVLAPVEIFIPAGSLLNPSDAAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWVGCSGVHTHMTNTRITDPEILERRCP 318
+G LAP+E IP LLNPSD A VVGGNVLTSQRV DV+LK F+ACAASQGCMNNLTFGD+ GYYETIAGGAGAGP W G SGVHTH TNTRITDPEILERR P
Sbjct: 48 EGCLAPIEFKIPKYCLLNPSDDAGVVGGNVLTSQRVVDVVLKAFKACAASQGCMNNLTFGDKKFGYYETIAGGAGAGPNWHGRSGVHTHCTNTRITDPEILERRYP 153
BLAST of mRNA_H-elongata_contig100205.23.1 vs. uniprot
Match: UPI0003F0CF60 (5-oxoprolinase-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0CF60) HSP 1 Score: 173 bits (438), Expect = 3.170e-52 Identity = 81/106 (76.42%), Postives = 90/106 (84.91%), Query Frame = 1 Query: 1 QGVLAPVEIFIPAGSLLNPSDAAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWVGCSGVHTHMTNTRITDPEILERRCP 318
QG L PV+ IP G LLNP D AAVVGGNVLTSQR+ DV+LK F CAASQGCMNN+TFGD+ +GYYET++GG+GAGPTW G SGVHTHMTNTRITDPEILERR P
Sbjct: 10 QGCLNPVKAIIPEGCLLNPCDKAAVVGGNVLTSQRIVDVVLKAFSVCAASQGCMNNVTFGDQNVGYYETVSGGSGAGPTWNGRSGVHTHMTNTRITDPEILERRYP 115
BLAST of mRNA_H-elongata_contig100205.23.1 vs. uniprot
Match: A0A183J5A7_9BILA (Hydantoinase_B domain-containing protein n=1 Tax=Soboliphyme baturini TaxID=241478 RepID=A0A183J5A7_9BILA) HSP 1 Score: 173 bits (439), Expect = 6.360e-52 Identity = 80/106 (75.47%), Postives = 90/106 (84.91%), Query Frame = 1 Query: 1 QGVLAPVEIFIPAGSLLNPSDAAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWVGCSGVHTHMTNTRITDPEILERRCP 318
QG L P+ I +P GSLLNPS AAVVGGNVLTSQR+ DVILKCF+ CAASQGCMNN++FGD + GYYETIAGG+GAGP + GC G+ THMTNTRITDPEILERR P
Sbjct: 156 QGCLKPIRITVPEGSLLNPSSNAAVVGGNVLTSQRIVDVILKCFKVCAASQGCMNNVSFGDTSFGYYETIAGGSGAGPNFPGCDGIQTHMTNTRITDPEILERRYP 261 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100205.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig100205.23.1 >prot_H-elongata_contig100205.23.1 ID=prot_H-elongata_contig100205.23.1|Name=mRNA_H-elongata_contig100205.23.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp QGVLAPVEIFIPAGSLLNPSDAAAVVGGNVLTSQRVTDVILKCFRACAASback to top mRNA from alignment at H-elongata_contig100205:60..760- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig100205.23.1 ID=mRNA_H-elongata_contig100205.23.1|Name=mRNA_H-elongata_contig100205.23.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=701bp|location=Sequence derived from alignment at H-elongata_contig100205:60..760- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig100205:60..760- >mRNA_H-elongata_contig100205.23.1 ID=mRNA_H-elongata_contig100205.23.1|Name=mRNA_H-elongata_contig100205.23.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=636bp|location=Sequence derived from alignment at H-elongata_contig100205:60..760- (Himanthalia elongata Himel1 dioecious)back to top |