mRNA_H-elongata_contig100173.20.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig100173.20.1 vs. uniprot
Match: D8LMK5_ECTSI (Similar to tripeptidylpeptidase II n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMK5_ECTSI) HSP 1 Score: 175 bits (443), Expect = 1.330e-48 Identity = 90/107 (84.11%), Postives = 98/107 (91.59%), Query Frame = 1 Query: 1 HVVILPGIVAAYYPDDPEANGVAPGAQIVSLKIGDSRLGSMETGTGVVRAVTEAVRMGCDVINMSYGEAAALCDSGRVADAVRDAALKHNSMFLASAMNAGPALSSV 321 H + GIVAAYYP+DPEANGVAPGAQIVSLKIGDSRLGSMETG GVVRAVTEAVRMGCDVINMSYGEAAALCDSGRV+D VRDA++KH +FL SAMNAGPAL++V Sbjct: 286 HGTHVAGIVAAYYPEDPEANGVAPGAQIVSLKIGDSRLGSMETGVGVVRAVTEAVRMGCDVINMSYGEAAALCDSGRVSDVVRDASIKHGILFLGSAMNAGPALTTV 392
BLAST of mRNA_H-elongata_contig100173.20.1 vs. uniprot
Match: A0A453P7Y9_AEGTS (Peptidase_S8 domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453P7Y9_AEGTS) HSP 1 Score: 118 bits (295), Expect = 2.080e-31 Identity = 61/107 (57.01%), Postives = 79/107 (73.83%), Query Frame = 1 Query: 1 HVVILPGIVAAYYPDDPEANGVAPGAQIVSLKIGDSRLGSMETGTGVVRAVTEAVRMGCDVINMSYGEAAALCDSGRVADAVRDAALKHNSMFLASAMNAGPALSSV 321 H + GI AA++P++P NGVAPGAQ++S +IGD+RLGSMETGTG+VRA+ AV CD+INMSYGE A L D GR D V + KH +F++SA N GPAL++V Sbjct: 38 HATHVAGIAAAFHPEEPVLNGVAPGAQLISCRIGDTRLGSMETGTGLVRALIAAVEHKCDLINMSYGEPALLPDYGRFIDIVNEVVDKHRIIFISSAGNNGPALNTV 144
BLAST of mRNA_H-elongata_contig100173.20.1 vs. uniprot
Match: A0A7S2UU32_9STRA (Subtilisin (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU32_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.250e-30 Identity = 61/107 (57.01%), Postives = 77/107 (71.96%), Query Frame = 1 Query: 1 HVVILPGIVAAYYPDDPEANGVAPGAQIVSLKIGDSRLGSMETGTGVVRAVTEAVRMGCDVINMSYGEAAALCDSGRVADAVRDAALKHNSMFLASAMNAGPALSSV 321 H + GI A Y+PD PE NG+APGAQ+VSLKIGDSRLGSMETG G++RA+ A ++ D+INMSYGEAA + +SGR + KH M+L SA N GPAL++V Sbjct: 60 HGTHVAGITAGYFPDQPELNGIAPGAQLVSLKIGDSRLGSMETGVGLMRALIYAQKLKVDLINMSYGEAACVANSGRFVRLSEEIVNKHGIMYLCSAGNNGPALTTV 166
BLAST of mRNA_H-elongata_contig100173.20.1 vs. uniprot
Match: H2Z492_CIOSA (Peptidase_S8 domain-containing protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2Z492_CIOSA) HSP 1 Score: 118 bits (296), Expect = 1.410e-30 Identity = 58/107 (54.21%), Postives = 79/107 (73.83%), Query Frame = 1 Query: 1 HVVILPGIVAAYYPDDPEANGVAPGAQIVSLKIGDSRLGSMETGTGVVRAVTEAVRMGCDVINMSYGEAAALCDSGRVADAVRDAALKHNSMFLASAMNAGPALSSV 321 H + I A Y+P++PE NGVAPGAQIV+LKIGDSRL +METGTG++R +TE VR GC + N+SYGEA+ +G++ + + A KHN +F++SA N GP LS+V Sbjct: 117 HGTHVAAITAGYFPEEPERNGVAPGAQIVALKIGDSRLSTMETGTGIIRGMTEVVRHGCQLANLSYGEASHWPGAGKICEVMEQAVTKHNLIFVSSAGNNGPCLSTV 223
BLAST of mRNA_H-elongata_contig100173.20.1 vs. uniprot
Match: A0A383V887_TETOB (Tripeptidyl-peptidase II n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383V887_TETOB) HSP 1 Score: 123 bits (308), Expect = 2.120e-30 Identity = 65/107 (60.75%), Postives = 79/107 (73.83%), Query Frame = 1 Query: 1 HVVILPGIVAAYYPDDPEANGVAPGAQIVSLKIGDSRLGSMETGTGVVRAVTEAVRMGCDVINMSYGEAAALCDSGRVADAVRDAALKHNSMFLASAMNAGPALSSV 321 H + GIVAA++PDDP ANG+APGAQI+S KIGDSRLGSMETGTG+VRA+ + G D+INMSYGE A+ D GR D + K +F+ASA NAGPALS+V Sbjct: 457 HGTHVAGIVAAHFPDDPAANGMAPGAQIISCKIGDSRLGSMETGTGLVRALAAVMEAGADIINMSYGEPASRADVGRAIDIAAETVHKAGVIFVASAGNAGPALSTV 563
BLAST of mRNA_H-elongata_contig100173.20.1 vs. uniprot
Match: A0A8B8EPU3_CRAVI (Tripeptidyl-peptidase 2 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8EPU3_CRAVI) HSP 1 Score: 122 bits (307), Expect = 2.870e-30 Identity = 62/107 (57.94%), Postives = 81/107 (75.70%), Query Frame = 1 Query: 1 HVVILPGIVAAYYPDDPEANGVAPGAQIVSLKIGDSRLGSMETGTGVVRAVTEAVRMGCDVINMSYGEAAALCDSGRVADAVRDAALKHNSMFLASAMNAGPALSSV 321 H + GI A Y+PD PE +GVAPGAQI+S+KIGD+RLGSMETGT +VRA+ + + CD++N SYGEAA+ DSGRV D + +A KH +F++SA N GPALS+V Sbjct: 259 HASHVAGIAAGYFPDQPERDGVAPGAQIISIKIGDTRLGSMETGTSLVRAMIKVIEYKCDLVNYSYGEAASWPDSGRVVDILSEAVNKHGVVFVSSAGNNGPALSTV 365
BLAST of mRNA_H-elongata_contig100173.20.1 vs. uniprot
Match: A0A4W3H3G6_CALMI (Peptidase_S8 domain-containing protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3H3G6_CALMI) HSP 1 Score: 120 bits (301), Expect = 4.260e-30 Identity = 57/107 (53.27%), Postives = 82/107 (76.64%), Query Frame = 1 Query: 1 HVVILPGIVAAYYPDDPEANGVAPGAQIVSLKIGDSRLGSMETGTGVVRAVTEAVRMGCDVINMSYGEAAALCDSGRVADAVRDAALKHNSMFLASAMNAGPALSSV 321 H + I A Y+P+DPE NGVAPGAQI+++KIGD+RL +METGTG++RA+ EA++ CD++N SYGEA +SGR+ + + +A LKHN ++++SA N GP LS+V Sbjct: 192 HGTHVASIAAGYFPEDPERNGVAPGAQILAMKIGDTRLSTMETGTGLIRAMIEAIKYKCDLVNYSYGEATHWPNSGRICEVINEAVLKHNVIYVSSAGNNGPCLSTV 298
BLAST of mRNA_H-elongata_contig100173.20.1 vs. uniprot
Match: A0A2Z7CCT1_9LAMI (Tripeptidyl-peptidase 2-like n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7CCT1_9LAMI) HSP 1 Score: 120 bits (301), Expect = 6.040e-30 Identity = 64/107 (59.81%), Postives = 78/107 (72.90%), Query Frame = 1 Query: 1 HVVILPGIVAAYYPDDPEANGVAPGAQIVSLKIGDSRLGSMETGTGVVRAVTEAVRMGCDVINMSYGEAAALCDSGRVADAVRDAALKHNSMFLASAMNAGPALSSV 321 H + GI AAY+P +P NGVAPGAQ++S KIGDSRLGSMETGTG+VRA+ AV CD+INMSYGEA L D GR D V + KH +F++SA N GPAL++V Sbjct: 189 HGTHVAGITAAYHPKEPLLNGVAPGAQLISCKIGDSRLGSMETGTGLVRALIAAVEHKCDLINMSYGEATLLPDYGRFVDLVNEVVNKHRLIFISSAGNNGPALNTV 295
BLAST of mRNA_H-elongata_contig100173.20.1 vs. uniprot
Match: A0A151T4Q0_CAJCA (Tripeptidyl-peptidase II n=5 Tax=indigoferoid/millettioid clade TaxID=2233855 RepID=A0A151T4Q0_CAJCA) HSP 1 Score: 121 bits (304), Expect = 7.300e-30 Identity = 63/107 (58.88%), Postives = 78/107 (72.90%), Query Frame = 1 Query: 1 HVVILPGIVAAYYPDDPEANGVAPGAQIVSLKIGDSRLGSMETGTGVVRAVTEAVRMGCDVINMSYGEAAALCDSGRVADAVRDAALKHNSMFLASAMNAGPALSSV 321 H + GI A++P +P NGVAPGAQI+S KIGDSRLGSMETGTG++RA+ EAV CD+INMSYGEA L D GR D V + KH +F++SA N+GP LS+V Sbjct: 299 HATHVAGIATAFHPKEPLLNGVAPGAQIISCKIGDSRLGSMETGTGLIRALIEAVEHKCDLINMSYGEATLLPDYGRFVDLVNEVVNKHRLIFVSSAGNSGPGLSTV 405
BLAST of mRNA_H-elongata_contig100173.20.1 vs. uniprot
Match: A0A2K3P1S4_TRIPR (Tripeptidyl-peptidase 2-like protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3P1S4_TRIPR) HSP 1 Score: 121 bits (303), Expect = 7.760e-30 Identity = 63/107 (58.88%), Postives = 79/107 (73.83%), Query Frame = 1 Query: 1 HVVILPGIVAAYYPDDPEANGVAPGAQIVSLKIGDSRLGSMETGTGVVRAVTEAVRMGCDVINMSYGEAAALCDSGRVADAVRDAALKHNSMFLASAMNAGPALSSV 321 H + GI AA++P +P NGVAPGAQ++S KIGDSRLGSMETGTG++RA+ AV CD+INMSYGE L D GR D V +A KH +F++SA N+GPALS+V Sbjct: 378 HATHVAGIAAAFHPTEPLLNGVAPGAQLISCKIGDSRLGSMETGTGLIRALIAAVEHKCDLINMSYGEPTLLPDYGRFVDLVNEAVNKHRLIFVSSAGNSGPALSTV 484 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100173.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig100173.20.1 >prot_H-elongata_contig100173.20.1 ID=prot_H-elongata_contig100173.20.1|Name=mRNA_H-elongata_contig100173.20.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp HVVILPGIVAAYYPDDPEANGVAPGAQIVSLKIGDSRLGSMETGTGVVRAback to top mRNA from alignment at H-elongata_contig100173:390..2163+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig100173.20.1 ID=mRNA_H-elongata_contig100173.20.1|Name=mRNA_H-elongata_contig100173.20.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1774bp|location=Sequence derived from alignment at H-elongata_contig100173:390..2163+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig100173:390..2163+ >mRNA_H-elongata_contig100173.20.1 ID=mRNA_H-elongata_contig100173.20.1|Name=mRNA_H-elongata_contig100173.20.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=642bp|location=Sequence derived from alignment at H-elongata_contig100173:390..2163+ (Himanthalia elongata Himel1 dioecious)back to top |