Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 485 |
| Cds size | 483 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929543.1232433-CDS-H-elongata_contig10001:8149..8632 | 1622929543.1232433-CDS-H-elongata_contig10001:8149..8632 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig10001 8150..8632 + |
| 1691679061.1266105-CDS-H-elongata_contig10001:8149..8632 | 1691679061.1266105-CDS-H-elongata_contig10001:8149..8632 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig10001 8150..8632 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10001.5.1 >prot_H-elongata_contig10001.5.1 ID=prot_H-elongata_contig10001.5.1|Name=mRNA_H-elongata_contig10001.5.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=161bp
NVNGSRAENGTRESTWEGHDYRNHSGESPGNGALDSSVDSRRRNLSGNDT
RNVAGNSTRRGTGKHGFGNSTVGSSGNGAGDNPGNHTWIVSENGTLYSGS
GNISRDGSGNGTGTGHSFGSDAGRRSENGSGNGTRKDTRARDAAPPVIQM
ETKVAPAGGGG back to topmRNA from alignment at H-elongata_contig10001:8150..8632+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-elongata_contig10001.5.1 ID=mRNA_H-elongata_contig10001.5.1|Name=mRNA_H-elongata_contig10001.5.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=483bp|location=Sequence derived from alignment at H-elongata_contig10001:8150..8632+ (Himanthalia elongata Himel1 dioecious)
AATGTAAATGGGAGCAGAGCCGAGAACGGTACGAGGGAGAGCACGTGGGA
GGGGCATGATTACCGAAACCATAGTGGGGAAAGTCCCGGTAACGGTGCTT
TAGACAGTTCCGTGGACAGTAGGAGGAGAAACTTGTCCGGAAACGATACC
AGAAACGTTGCTGGGAACAGCACTAGACGAGGAACCGGGAAGCATGGCTT
CGGGAACAGTACCGTGGGAAGTTCCGGGAACGGTGCTGGAGACAATCCCG
GGAATCACACCTGGATCGTTTCCGAGAACGGTACTCTTTACAGCGGCAGT
GGGAACATTTCCAGGGACGGCTCTGGCAACGGTACCGGTACCGGGCACAG
CTTCGGGAGCGATGCTGGGAGAAGATCCGAGAACGGTTCCGGGAACGGTA
CCCGGAAGGACACGAGGGCGAGGGACGCGGCGCCGCCCGTCATTCAAATG
GAGACAAAGGTAGCGCCCGCTGGTGGCGGTGGC back to topCoding sequence (CDS) from alignment at H-elongata_contig10001:8150..8632+ >mRNA_H-elongata_contig10001.5.1 ID=mRNA_H-elongata_contig10001.5.1|Name=mRNA_H-elongata_contig10001.5.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=966bp|location=Sequence derived from alignment at H-elongata_contig10001:8150..8632+ (Himanthalia elongata Himel1 dioecious)
AATGTAAATGGGAGCAGAGCCGAGAACGGTACGAGGGAGAGCACGTGGGA
GGGGCATGATTACCGAAACCATAGTGGGGAAAGTCCCGGTAACGGTGCTT
TAGACAGTTCCGTGGACAGTAGGAGGAGAAACTTGTCCGGAAACGATACC
AGAAACGTTGCTGGGAACAGCACTAGACGAGGAACCGGGAAGCATGGCTT
CGGGAACAGTACCGTGGGAAGTTCCGGGAACGGTGCTGGAGACAATCCCG
GGAATCACACCTGGATCGTTTCCGAGAACGGTACTCTTTACAGCGGCAGT
GGGAACATTTCCAGGGACGGCTCTGGCAACGGTACCGGTACCGGGCACAG
CTTCGGGAGCGATGCTGGGAGAAGATCCGAGAACGGTTCCGGGAACGGTA
CCCGGAAGGACACGAGGGCGAGGGACGCGGCGCCGCCCGTCATTCAAATG
GAGACAAAGGTAGCGCCCGCTGGTGGCGGTGGCAATGTAAATGGGAGCAG
AGCCGAGAACGGTACGAGGGAGAGCACGTGGGAGGGGCATGATTACCGAA
ACCATAGTGGGGAAAGTCCCGGTAACGGTGCTTTAGACAGTTCCGTGGAC
AGTAGGAGGAGAAACTTGTCCGGAAACGATACCAGAAACGTTGCTGGGAA
CAGCACTAGACGAGGAACCGGGAAGCATGGCTTCGGGAACAGTACCGTGG
GAAGTTCCGGGAACGGTGCTGGAGACAATCCCGGGAATCACACCTGGATC
GTTTCCGAGAACGGTACTCTTTACAGCGGCAGTGGGAACATTTCCAGGGA
CGGCTCTGGCAACGGTACCGGTACCGGGCACAGCTTCGGGAGCGATGCTG
GGAGAAGATCCGAGAACGGTTCCGGGAACGGTACCCGGAAGGACACGAGG
GCGAGGGACGCGGCGCCGCCCGTCATTCAAATGGAGACAAAGGTAGCGCC
CGCTGGTGGCGGTGGC back to top
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