mRNA_H-akashiwo_Contig100.4.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig100.4.1 vs. uniprot
Match: A0A7S3XSI7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSI7_HETAK) HSP 1 Score: 245 bits (626), Expect = 3.100e-79 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = -1 Query: 1 GPGGGPDFEEPGRRLLLTQMALKCADVGHPAKPWALHARWSRLIAEEFWRQGDAERRRGVPISPLCDRHAGGNFAKSQCDFVDFVVRPCLVPFSKCCKEDRWTALVDANYA 333 GPGGGPDFEEPGRRLLLTQMALKCADVGHPAKPWALHARWSRLIAEEFWRQGDAERRRGVPISPLCDRHAGGNFAKSQCDFVDFVVRPCLVPFSKCCKEDRWTALVDANYA Sbjct: 230 GPGGGPDFEEPGRRLLLTQMALKCADVGHPAKPWALHARWSRLIAEEFWRQGDAERRRGVPISPLCDRHAGGNFAKSQCDFVDFVVRPCLVPFSKCCKEDRWTALVDANYA 340
BLAST of mRNA_H-akashiwo_Contig100.4.1 vs. uniprot
Match: D8LTM6_ECTSI (Phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM6_ECTSI) HSP 1 Score: 133 bits (334), Expect = 5.050e-34 Identity = 62/109 (56.88%), Postives = 75/109 (68.81%), Query Frame = -1 Query: 4 PGGGPDFEEPGRRLLLTQMALKCADVGHPAKPWALHARWSRLIAEEFWRQGDAERRRGVPISPLCDRHAGGNFAKSQCDFVDFVVRPCLVPFSKCCKEDRWTALVDANY 330 P GG + ++LL QM +K ADV HP KPW LH RW+RLI EEF RQGD E +GVP+SPLC R G N AKSQCDFV+FVVRPC FS+ CK+ W +++NY Sbjct: 508 PKGGATKDPLQAQILLMQMVIKVADVSHPMKPWDLHERWTRLITEEFHRQGDLEAEKGVPVSPLCSRE-GHNQAKSQCDFVNFVVRPCATVFSEFCKDRIWVTTLESNY 615
BLAST of mRNA_H-akashiwo_Contig100.4.1 vs. uniprot
Match: A0A7S3XSN1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSN1_HETAK) HSP 1 Score: 122 bits (307), Expect = 1.910e-32 Identity = 54/100 (54.00%), Postives = 71/100 (71.00%), Query Frame = -1 Query: 4 PGRRLLLTQMALKCADVGHPAKPWALHARWSRLIAEEFWRQGDAERRRGVPISPLCDRHAGGNFAKSQCDFVDFVVRPCLVPFSKCCKEDRWTALVDANY 303 P ++LL Q A+KCAD+ HPAKPWALH +WS LI EF+ QG E R G+P+SPLCD+ A + KSQC+F+DF+VRPC PF++ C+ W V+ NY Sbjct: 36 PDSQVLLMQFAIKCADICHPAKPWALHEQWSDLITREFFAQGAREARAGLPVSPLCDQ-AKVDIPKSQCNFIDFLVRPCFEPFAQFCEVQEWMDNVEDNY 134
BLAST of mRNA_H-akashiwo_Contig100.4.1 vs. uniprot
Match: A0A835Z5P1_9STRA (Phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P1_9STRA) HSP 1 Score: 128 bits (322), Expect = 3.230e-32 Identity = 57/103 (55.34%), Postives = 73/103 (70.87%), Query Frame = -1 Query: 4 FEEPGRRLLLTQMALKCADVGHPAKPWALHARWSRLIAEEFWRQGDAERRRGVPISPLCDRHAGGNFAKSQCDFVDFVVRPCLVPFSKCCKEDRWTALVDANY 312 FE ++LL Q+ LK ADV H KPW +H RWS +I EEF++QGD ER +G+ ISPLCDR A GN AKSQCDF+DF+VRPC+ FS C+ WT ++ N+ Sbjct: 1716 FESANSQILLLQVILKVADVSHATKPWDIHRRWSDMITEEFFKQGDLERGQGLQISPLCDR-AQGNLAKSQCDFIDFIVRPCVTMFSDFCETTLWTDTLNTNF 1817
BLAST of mRNA_H-akashiwo_Contig100.4.1 vs. uniprot
Match: D7G4U4_ECTSI (Phosphodiesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4U4_ECTSI) HSP 1 Score: 123 bits (308), Expect = 2.350e-30 Identity = 52/97 (53.61%), Postives = 68/97 (70.10%), Query Frame = -1 Query: 4 RLLLTQMALKCADVGHPAKPWALHARWSRLIAEEFWRQGDAERRRGVPISPLCDRHAGGNFAKSQCDFVDFVVRPCLVPFSKCCKEDRWTALVDANY 294 ++L+ QM LK ADV HP KPW +H +WS L+ EEF++QGD E RG+ +SPLCDR N KSQCDF+DF+VRPC+ FS CK W +D+N+ Sbjct: 644 QILVLQMVLKVADVAHPCKPWEVHHKWSELVTEEFFKQGDKEAARGLAVSPLCDRR-DQNLPKSQCDFIDFIVRPCVTIFSMYCKVTTWNDQLDSNF 739
BLAST of mRNA_H-akashiwo_Contig100.4.1 vs. uniprot
Match: A0A7S3XXI8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXI8_HETAK) HSP 1 Score: 116 bits (291), Expect = 2.290e-29 Identity = 53/109 (48.62%), Postives = 74/109 (67.89%), Query Frame = -1 Query: 4 PGGGPDFEEPGRRLLLTQMALKCADVGHPAKPWALHARWSRLIAEEFWRQGDAERRRGVPISPLCDRHAGGNFAKSQCDFVDFVVRPCLVPFSKCCKEDRWTALVDANY 330 PG G + +LLL Q A+KCAD+ HP++PW +H +W+ LI+EEF+ QG E+ G+PIS LCDR A KSQCDF++F+V+PCL PFS+ +E W ++ NY Sbjct: 102 PGSGFSKDNSESQLLLMQFAIKCADICHPSRPWDIHCQWTHLISEEFFAQGAREKEEGLPISFLCDR-ATVVLPKSQCDFINFLVKPCLGPFSEFAEETEWMDHLNLNY 209
BLAST of mRNA_H-akashiwo_Contig100.4.1 vs. uniprot
Match: A0A7S1C4N6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C4N6_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.210e-27 Identity = 59/106 (55.66%), Postives = 68/106 (64.15%), Query Frame = -1 Query: 7 GPDF-EEPGRRLLLTQMALKCADVGHPAKPWALHARWSRLIAEEFWRQGDAERRRGVPISPLCDRHAGGNFAKSQCDFVDFVVRPCLVPFSKCCKEDRWTALVDAN 321 G DF + LLL QMALKCADVGHPA+P LH +WS LI+ EF QGD ER G+PISPLCDR + AKSQ F++FVVRPC PFS C W + N Sbjct: 789 GDDFGSDDNDMLLLLQMALKCADVGHPARPLPLHEKWSNLISREFHMQGDKERVLGLPISPLCDRD-NFDLAKSQQGFIEFVVRPCFEPFSAFCGVTTWNEHITHN 893
BLAST of mRNA_H-akashiwo_Contig100.4.1 vs. uniprot
Match: A0A7S1CCP6_9STRA (Phosphodiesterase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CCP6_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.000e-23 Identity = 46/82 (56.10%), Postives = 61/82 (74.39%), Query Frame = -1 Query: 49 RLLLTQMALKCADVGHPAKPWALHARWSRLIAEEFWRQGDAERRRGVPISPLCDRHAGGNFAKSQCDFVDFVVRPCLVPFSK 294 R+ + MA+KCADVGHPA+P+ +H +WS++I EF+ QGD ER+RG+ ISPLCDR N +KSQ F+DFVVRP FS+ Sbjct: 658 RMAVMAMAIKCADVGHPARPFHVHLQWSKMITAEFYAQGDLERQRGMEISPLCDRR-NHNLSKSQLGFIDFVVRPAFALFSR 738
BLAST of mRNA_H-akashiwo_Contig100.4.1 vs. uniprot
Match: A0A6U3TVK1_9STRA (Phosphodiesterase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3TVK1_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.300e-22 Identity = 52/109 (47.71%), Postives = 66/109 (60.55%), Query Frame = -1 Query: 7 PDFEEPGRRLLLTQMALKCADVGHPAKPWALHARWSRLIAEEFWRQGDAERRRGVPISPLCDRHAGGNFAKSQCDFVDFVVRPC----LVPFSKCCK-EDRWTALVDAN 318 P E+ +L+ QMALKCAD+ HP K W++H RWS LI EEF+ QGDAE+ G+P+S LCDR Q F+DFVVRPC + FSK E W ++AN Sbjct: 399 PCAEDEEGNILVLQMALKCADISHPTKKWSVHHRWSLLIVEEFFNQGDAEKLAGLPVSALCDRQ-NDQIHNMQIGFIDFVVRPCFSAVIAYFSKEPNFEHAWLQQLNAN 506
BLAST of mRNA_H-akashiwo_Contig100.4.1 vs. uniprot
Match: G0YFD7_MYTED (Putative phosphodiesterase 1 (Fragment) n=1 Tax=Mytilus edulis TaxID=6550 RepID=G0YFD7_MYTED) HSP 1 Score: 89.4 bits (220), Expect = 3.980e-20 Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = -1 Query: 70 RLLLTQMALKCADVGHPAKPWALHARWSRLIAEEFWRQGDAERRRGVPISPLCDRHAGGNFAKSQCDFVDFVVRP 294 + M L CAD+GHPAK W LH +W+ + EEF+RQGD E+ G+P SPLCDR +G A+SQ F+DF+V P Sbjct: 72 KAKALSMVLHCADIGHPAKEWNLHYKWTNQLLEEFFRQGDREKELGLPFSPLCDR-SGVLVAESQIGFIDFIVDP 145 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig100.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig100.4.1 >prot_H-akashiwo_Contig100.4.1 ID=prot_H-akashiwo_Contig100.4.1|Name=mRNA_H-akashiwo_Contig100.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=111bp RVVGVHQCCPPVLLAALAEGHQAGPHHKVHKVALALGEVAPRVAVAQRRDback to top mRNA from alignment at H-akashiwo_Contig100:169175..169508+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig100.4.1 ID=mRNA_H-akashiwo_Contig100.4.1|Name=mRNA_H-akashiwo_Contig100.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=334bp|location=Sequence derived from alignment at H-akashiwo_Contig100:169175..169508+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig100:169175..169508+ >mRNA_H-akashiwo_Contig100.4.1 ID=mRNA_H-akashiwo_Contig100.4.1|Name=mRNA_H-akashiwo_Contig100.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=333bp|location=Sequence derived from alignment at H-akashiwo_Contig100:169175..169508+ (Heterosigma akashiwo CCMP452)back to top |