mRNA_H-akashiwo_Contig1251.2.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1251.2.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 613 bits (1580), Expect = 3.720e-215 Identity = 295/333 (88.59%), Postives = 318/333 (95.50%), Query Frame = 1
Query: 970 MELHDHLLSLGFQRSGHESCLYIRREGGRELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRNKCFYLSQTSFIKDALSKFGLDYLPACAAPMDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAERAFRYLKGTQSEPLRLGGDLVLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPILWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLLVSKKNRHFHVSYHLAKEQVSLGTIRMFFIKTHNQVADIFTK 1968
MELHDHL SLGF+RSGHESCLYI R+GG ELMVAVYVDDLV+SGSS A+VS+FKQSLASKY LTDQGELTQILGIKVVRDKRNKCF+LSQTSFIKDAL+KFGLDYLPAC P+DHTVDLTPTPGFKAELSDAN+YRSMVGTLAWVANWTRPELAFTVHKLQRTQ NPE KHFEA +RAFRYLKGTQSE LRLGGDLVLRAFSDSDFC+DR+DGKSVTGY+LFLGDAPI+WSSKLQGAVTTSTVEAEYLALRS+VKDIMWLR LL ++GCPQ EPTPVVEDNSAC+EWAND+LV+K+NRHFHVSYHLAKEQVSLGTIRMF+IKTH+QVADI TK
Sbjct: 1 MELHDHLESLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTK 333
BLAST of mRNA_H-akashiwo_Contig1251.2.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK) HSP 1 Score: 441 bits (1135), Expect = 3.950e-149 Identity = 215/268 (80.22%), Postives = 235/268 (87.69%), Query Frame = 1
Query: 781 EFGVDYRQTYSPVVNAASLRLLLAISANKGYA-----------------------PPGFVDPEHPDKVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYIRREGGRELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRNKCFYLSQTSFIKDALSKFGLDYLPACAAPMDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAERAFRYL 1515
+FG+D++QTYSPVVNAASLRLLLAISANKGYA PP +VDP+HP+KVWKLNKALYGL+QSPR+WYMELHDHL SLGF+RSGHESCLYI R+GG ELMVAVYVDDLV+SGSS A+VS+FKQSLASKY+LTDQGELTQILGIKVVRDKRNKCF+LSQTSFIKDAL+KFGLDYLPAC P+DHTVDLTPTPGFKAELSDAN+YRSMVGTLAWVANWTRPELAFTVHKLQRTQ NPE KHFEA +RAFRYL
Sbjct: 1 KFGIDFQQTYSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAMTDDVYVRQPPSYVDPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLESLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268
BLAST of mRNA_H-akashiwo_Contig1251.2.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 379 bits (972), Expect = 1.530e-115 Identity = 204/502 (40.64%), Postives = 305/502 (60.76%), Query Frame = 1
Query: 571 SARLPQSPGEARRLPDWPEWRDALNGELSSITDKNTYTLVDRPPHANVIGTLSVLSKKSDADGHLVSH---------TQEFGVDYRQTYSPVVNAASLRLLLAISANKGYA-----------------------PPGFVDPEHPDKVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLY--IRREGGRELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRNKCFYLSQTSFIKDALSKFGLDYLPACAAPMDHTVDLTPTPGFKAELS--DANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAERAFRYLKGTQSEPLRLGGDLVLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPILWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLLVSKKNRHFHVSYHLAKEQVSLGTIRMFFIKTHNQVADIFTK 1968
S + P + A+R PDW WR+A+ E S+ N + LVD+P AN++G +L+KK DADG+L + +Q GVDY T+SPVV++ASLR +L I+A++ P G+ P KV KL K+LYGL+Q+P+ WY L+ LL G+ R+G++SC+Y + GG+ L ++VYVDD+V++ S + +S K++++ Y+++D GE+ ILGIKV RD+ + LSQ SFI++A KF + P++ +D+ LS +A +RS+VGT+ W+A WT PE+A+++H L + +P A A+ RYL T+ + + LGG L L A++D+DFCS+R G+S +G+ +FLG +PI+WSS++Q VT +T EAEY++LR++V D+MWL+ LL LG +Q P+ EDN ACI WAND VSK RH HVSYH KE V I + ++ T +Q+AD+FTK
Sbjct: 480 SEQNPWNLAHAQRSPDWMRWREAVADEYDSLLRHNVWELVDKPSGANIVGCRWILAKKYDADGNLSKYKARLCAQGYSQIEGVDYTNTFSPVVSSASLRTVLTIAASEDMEIHCMDIKTAFLHGKLEEDIYMKQPEGYEVPGMEHKVLKLKKSLYGLKQAPKCWYQNLNGFLLQQGYTRNGYDSCVYSKVSSTGGKTL-ISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGY-KQGCVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTK 979
BLAST of mRNA_H-akashiwo_Contig1251.2.1 vs. uniprot
Match: A0A438J1J0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=4 Tax=Vitis vinifera TaxID=29760 RepID=A0A438J1J0_VITVI) HSP 1 Score: 327 bits (837), Expect = 2.250e-94 Identity = 221/694 (31.84%), Postives = 345/694 (49.71%), Query Frame = 1
Query: 22 PNGNSIAETSIKVCCQRMRASLHSSNLSGSYWSEALLHSVETTSRLPTKGLPNHISPYESWYGHRPSILHLRSFGASCYAYLPVELRPGKLSSKGVLHKFLSYG-SSTGYS----DSGASSSSHD-----DSSANSLPSVNLPAPPVSSPSTKNLSPSGTGRXXXXXXXXXXXXXXXXXXSRTANYARKLRRTSARLPQSPGEARRLPDWPEWRDALNGELSSITDKNTYTLVDRPPHANVIGTLSVLSKKSDADGHL---------VSHTQEFGVDYRQTYSPVVNAASLRLLLAISANKGYA-----------------------PPGFVDPEHPDKVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYIRREGGRELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRNKCFYLSQTSFIKDALSKFGLDYLPACAAPMDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAERAFRYLKGTQSEPLRLG--GDLVLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPILWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLLVSKKNRHFHVS-YHLAKEQVSLGTIRMFFIKTHNQVADIFTK 1968
P N ++E + + R LH L W+EA +V +RLPT+ L +P+E+W+G++P + +LR+FG C++Y+P +++ KL K F+ Y SS Y +G S D D N S+ + P V +++ S + Y R P E +W +A+ EL I +T+ LVDRP H VIG V K +ADG + ++Q FGVD+ +T++PV ++R+LLA++A KG+ P GF +KV+ L KALYGL+Q+PR WY + +HL SLGF +S E+ LY++ ++V+VYVDDL+V+GS+ LV +FK + +++TD G ++ LG++V +D ++SQ + K+ L+KF +D + PM+ + G E D + YRS++G L ++ TRP++ F+V L R HF+AA+R RY+KGT + ++ + L +SDSD+ D +S TG+ G WSSK Q + ST EAEY+A ++V +W+R +LADL Q EPT + DN A I +ND + K +HF + YHL +EQ G +++ + KT +Q+AD+ TK
Sbjct: 609 PQQNGVSERKNRSIMEMTRCMLHEKELPKKLWAEAANTAVFLLNRLPTRVLQKK-TPFEAWFGYKPDLKNLRTFGCLCFSYVP-QVKRDKLDKKAEPGVFIGYSNSSKAYRIFQPQNGKILVSRDVKFMEDRQWNWEESIKMQLPKVPQYFDEDID----------------DVPVRGIRSLSDVYERNNVAVF-----EPAEFEEAEKDDKWIEAMKEELRMIEKNDTWELVDRPQHRKVIGVKWVYRTKLNADGSVNKYKARLVVKGYSQVFGVDFSETFAPVARLDTIRMLLALTAQKGWKTYQLDVKSAFLNGYLQEEIYVEQPEGFQVKGQEEKVYLLKKALYGLKQAPRAWYSRIDEHLQSLGFVKSPSEATLYVKGTDANLIVVSVYVDDLLVTGSNEKLVKEFKAEMLKVFEMTDLGLMSYFLGMEVKQDHDG--VFISQKKYAKEILNKFHMDDCKRTSTPMNQKEKFSKDDG--TEKVDESQYRSLIGCLMYLTA-TRPDIMFSVSLLSRFMHCASEVHFQAAKRIVRYIKGTTNYGIKYSYYQNFKLHGYSDSDWAGSIDDMRSTTGFCFNFGSGIFSWSSKKQDVIAQSTAEAEYVAANATVNQAIWIRKILADLHMKQNEPTQIHVDNQAAIAISNDSVFHGKTKHFKIKLYHLREEQKD-GEVKLLYCKTEDQIADVLTK 1273
BLAST of mRNA_H-akashiwo_Contig1251.2.1 vs. uniprot
Match: A0A438IYC9_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438IYC9_VITVI) HSP 1 Score: 315 bits (806), Expect = 5.630e-94 Identity = 217/695 (31.22%), Postives = 328/695 (47.19%), Query Frame = 1
Query: 7 TGRSNPNGNSIAETSIKVCCQRMRASLHSSNLSGSYWSEALLHSVETTSRLPTKGLPNHISPYESWYGHRPSILHLRSFGASCYAYLPVELRPGKLSSKGVLHKFLSYGSSTGYSDSGASSSSHDDSSANSLPSVNLPAPPVSSPSTKNLSPSGTGRXXXXXXXXXXXXXXXXXXSRTANYARKLRRTSARLPQ-------SPGEARRLPDWPEWRDALNGELSSITDKNTYTLVDRPPHANVIGTLSVLSKKSDADGHLVSH---------TQEFGVDYRQTYSPVVNAASLRLLLAISANK---------------GYA--------PPGFVDPEHPDKVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYIRREGGRELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRNKCFYLSQTSFIKDALSKFGLDYLPACAAPMDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAERAFRYLKGTQSEPLRLGG--DLVLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPILWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLLVSKKNRHFHVSYHLAKEQVSLGTIRMFFIKTHNQVADIFTK 1968
T P N + E + + R LH L S+W+EA +V +RLPTK L +P+E+W+G++P +++L++FG C++Y+P +++ KL K F+ Y S++ A + P + S + + RT + Q P + WR A+ EL+ I NT+ LVDRP H IG V K ++DG + H Q FGVD+ +T++PV ++R+LLA++A + GY P GF +KV+ L KALYGLRQ+PR WY + HLL+LGF +S E LYI++ L+V++YVDDL+V+GS+ V+ FK + +++TD GE++ LG++V K+N+ F + Q + K+ L KF ++ + + PM+ G AE D +YRSM+G L ++ TRP++ V L R HF+AA+R RY+KGT ++ FSDSD+ D +S +GY G WSS+ Q V ST EAEY+A ++V +WLR LL DL Q+ T V DN A I AND + K +HF + + +E G I++ + T +Q ADI TK
Sbjct: 40 TAPYTPQQNGVVERKNRTIMEMTRCLLHEKELPKSFWAEAANTAVFLLNRLPTKALQKQ-TPFEAWFGYKPMLMNLKTFGCLCFSYVP-QVKRDKLDKKSEPGIFIGYSSTS-------------------------KAYRIYLPQNNKIVVSRDVKFLETEKWSWDEQNQQYVDEDVDELPVRGFRTLFDIYQRCNIAVLEPAGFVEAAENKRWRVAMQEELNMIDKNNTWELVDRPSHKKPIGVKWVYRTKLNSDGSINKHKARLVVKGYAQMFGVDFSETFAPVARLDTIRMLLALAAQRKWKIYQLDVKSAFLNGYLEEEIFVEQPEGFAIKGKEEKVYLLKKALYGLRQAPRAWYSRIDTHLLTLGFHKSLSEFTLYIKKIEEDILIVSLYVDDLLVTGSNAGFVNKFKAEMEQVFEMTDLGEMSYFLGMEV-HQKQNEIF-ICQQKYAKEILKKFKMEECKSTSTPMNQKEKFCKEDG--AEKVDEGLYRSMIGCLMYLTA-TRPDIMHAVSLLSRYMHCASEIHFQAAKRVIRYVKGTVDYGIKFSQVQSFNFHGFSDSDWAGCVDDMRSTSGYCFSFGSGVSSWSSRKQEVVAQSTAEAEYIAAVAAVNQALWLRKLLTDLDMKQEVSTKVFVDNQATISIANDPVFHGKTKHFKIKLYFLREVQKEGDIQLVYCNTESQNADILTK 702
BLAST of mRNA_H-akashiwo_Contig1251.2.1 vs. uniprot
Match: A0A7S3Y3B6_HETAK (Hypothetical protein (Fragment) n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3B6_HETAK) HSP 1 Score: 305 bits (781), Expect = 5.760e-94 Identity = 161/296 (54.39%), Postives = 193/296 (65.20%), Query Frame = 1
Query: 583 PQSPGEARRLPDWPEWRDALNGELSSITDKNTYTLVDRPPHANVIGTLSVLSKKSDADGHLVSH---------TQEFGVDYRQTYSPVVNAASLRLLLAISANKGYA-----------------------PPGFVDPEHPDKVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYIRREG--GRELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRNKCFYLSQTSFIKDALSKFGLDYLPACAAPMDHTVDLTPTPGFKAELSDAN 1368
P P ++RRLPD E+ A+ EL S+ LVD PP A+ IGT +LSKK DADG+L + TQ GVD+ TYSPV+ A SLRL+L+I+ANKG+A PPGFVD +HP KVWKL KALYGLRQSPR+WY LH+ LL F RS +ESCLY R+ G + MVAVYVDDLV+S + P++VS K S S++ +TD G LT ILGIKV RD NKCFYLSQ SF++DA+SKFGLDYLPAC PM + DLTPTPGFKA L DAN
Sbjct: 114 PYGPNQSRRLPDKEEYDQAMLKELDSMESHGVKELVDLPPGAHAIGTRWILSKKFDADGNLQKYKARLVAQGFTQREGVDFSTTYSPVIAAPSLRLMLSIAANKGHAVEALDISTAFLNSDIDGDVYVKQPPGFVDKDHPHKVWKLKKALYGLRQSPRLWYNTLHEFLLQQNFVRSDYESCLYTRKNSVTGEDTMVAVYVDDLVLSSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMTNATDLTPTPGFKASLPDAN 409
BLAST of mRNA_H-akashiwo_Contig1251.2.1 vs. uniprot
Match: A0A2I0B6L3_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0B6L3_9ASPA) HSP 1 Score: 320 bits (820), Expect = 4.210e-93 Identity = 209/688 (30.38%), Postives = 323/688 (46.95%), Query Frame = 1
Query: 7 TGRSNPNGNSIAETSIKVCCQRMRASLHSSNLSGSYWSEALLHSVETTSRLPTKGLPNHISPYESWYGHRPSILHLRSFGASCYAYLPVELRPGKLSSKGVLHKFLSYGSSTGYSDSGASSSSHDDSSANSLPSVNLPAPPVSSPSTKNLSPSGTGRXXXXXXXXXXXXXXXXXXSRTANYARKLRRTSARLPQSPGEARRLPDWPEWRDALNGELSSITDKNTYTLVDRPPHANVIGTLSVLSKKSDADGHLVSH---------TQEFGVDYRQTYSPVVNAASLRLLLAISANKGYA-----------------------PPGFVDPEHPDKVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYIRREGGRELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRNKCFYLSQTSFIKDALSKFGLDYLPACAAPMDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAERAFRYLKGTQSEPL--RLGGDLVLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPILWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLLVSKKNRHFHVSYHLAKEQVSLGTIRMFFIKTHNQVADIFTK 1968
T P N AE + + A + L +W+EA+ +V +R PTK L + I+P+E+W +PS+ HL+ FG+ C+ +P E R K + FL Y + T K + NY EA+ D EW+DA+ E+ I T+TLV RPP +IG V K ++DG + + +Q+ G DY +T++PV ++R+L A++A + + PPGF DKV KL+KALYGL+Q+PR W E+ L GFQ+S +E+ LY + G L++++YVDDL+V+G L+ +FK + SKY+++D G+L LG++V + +K ++SQ ++I++ L +F ++ A P+ + L G A +++ +YRS++G+L +V +RP+L F L R P KHF A+R RYLKGT L R GD L F DSD+ D KS +GY+ FL A W SK Q V S+ EAEY+A+ + +MWL+ +LADLG E T + DN++ + A + + + +H + +H ++ V G + F T NQ+ADI TK
Sbjct: 423 TAPYTPQQNGTAERKNRTLVEMATAMMEEKGLPKIFWAEAISTAVYLQNRCPTKALKD-ITPFEAWNSFKPSVSHLKIFGSICFVQVPTEKRI-KFDRRSTKCIFLGYDART-----------------------------------KGYRAYDVENKSLIVSRDVIFDENSAWNWKQTNYE---------------EAK---DQKEWQDAMKEEIHMIQKNKTWTLVPRPPGKQIIGVKWVYKIKYNSDGTVQKNKARLVAKGFSQKAGEDYSETFAPVARMETIRILFAVAAMRRWIIHHLDVKSAFLNGMLEEDVYCNQPPGFEVDGEEDKVLKLHKALYGLKQAPRAWNAEIDRFFLQNGFQKSCNEATLYTLNQNGHILIISIYVDDLLVTGDDEGLIQNFKDQMKSKYEMSDMGQLRYFLGLEV--HQSSKGIFISQKNYIQNVLKRFRMNECKAIDTPLSTSDKLKKEDG--APEANSEIYRSLIGSLLYVTI-SRPDLMFAASLLSRYMHQPSKKHFSTAKRVLRYLKGTIDHGLFYRSEGDCQLWGFCDSDWAGCVDDSKSTSGYIFFLNGAICSWMSKKQSVVAQSSAEAEYIAMAKATSQLMWLKRILADLGVKVDEKTVIYCDNTSAMAIAKNPVFHDRTKHIQIKFHFIRDAVKEGLVEFKFCSTENQLADILTK 1050
BLAST of mRNA_H-akashiwo_Contig1251.2.1 vs. uniprot
Match: A0A498M2F0_LABRO (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M2F0_LABRO) HSP 1 Score: 311 bits (798), Expect = 1.600e-92 Identity = 205/697 (29.41%), Postives = 339/697 (48.64%), Query Frame = 1
Query: 22 PNGNSIAETSIKVCCQRMRASLHSSNLSGSYWSEALLHSVETTSRLPTKGLPNHISPYESWYGHRPSILHLRSFGASCYAYLPVELRPGKLSSKGVLHKFLSYGSST-GYSDSGASSSSHDDSSANSLPSVNLPAPPVSSPSTKNLSPSGTGRXXXXXXXXXXXXXXXXXXSRTANYARKLRR-------------TSARLPQSPGEARRLPDWPEWRDALNGELSSITDKNTYTLVDRPPHANVIGTLSVLSKKSDADGHLVSH---------TQEFGVDYRQTYSPVVNAASLRLLLAISANKGYA-----------------------PPGFVDPEHPDKVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYIRREGGRELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRNKCFYLSQTSFIKDALSKFGLDYLPACAAPMDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAERAFRYLKGTQSEPLRLGGDLVLRA--FSDSDFCSDRIDGKSVTGYVLFLGDAPILWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLLVSKKNRHFHVSYHLAKEQVSLGTIRMFFIKTHNQVADIFTK 1968
P N +AE K + +R+ L + L +W+EAL +V +R PTK + ++P+E+W G +P + HLR FG + YA++P + R KL K L YG+ T GY +D A S ++ + K + G + + +LR+ P++ + PD +W++A+ E+ S+ N + LV+ P +G+ V K DADG H +Q+FG DY +T+SPVV S+R ++A + G P GFV V KLN+++YGL+QSPR W + L + L +GF ++ + C+Y G ++AVYVDD++++G S + + K+ LA +++ D GELT LG+K+++ ++ Q ++ ++ L KFG++ + P+D L +E+ D ++S VG+L +++ TRP++A+ V+ + R P +H+ A +R RYLKGT + L D FSD+D+ D+ D KS++GY+ + A + W SK Q V ST EAEY+AL S+ ++ +W+R L+ DL Q PT + EDN + I A + + +H + YH +E+++ G I + + T + VAD+FTK
Sbjct: 45 PEQNGVAERMNKTLMETVRSMLADAKLPQKFWAEALSTAVYLRNRSPTKSVKG-MTPFEAWTGEKPKVDHLRIFGCTVYAHVPKDERK-KLDPKAKKCILLGYGTETKGYR-------LYDSKLAKVFFSRDVIFNESNHAFEKEPVANEDGAVNRYVEFDCQEPDNEESPEQKVQRSERLRKPPDYYGEWVTVASNPTTEPKTVKDVLSSPDKAKWKEAMEKEMESLYANNVWNLVELPKGRKAVGSKWVFKVKVDADGTFERHKARLVAQGFSQKFGSDYDETFSPVVRFESVRTIIAQAVQYGLKLHQMDVKTAFLNGELKEEVYMQQPEGFVVKGKEHLVCKLNRSIYGLKQSPRCWNIVLDEQLKKMGFVQTTGDPCIYTAATG-EMFIIAVYVDDILLAGCSDKRMMEVKKMLAKHFEIKDMGELTHFLGVKIIQKPETGEIWMGQATYAENVLKKFGMENSKPVSTPVDINTKLVKHSD-DSEVMDPKQFQSAVGSLLYLSTRTRPDIAYAVNNVARFCAKPTKQHWTAVKRIMRYLKGTLNLGLLYNKDKPKECIGFSDADWAGDQNDRKSMSGYMFQISGAAVSWRSKKQTCVALSTAEAEYMALASAAQEAVWMRQLMTDLKVNQAGPTVMFEDNQSAICMAKNSQFHGRAKHIDIKYHFIREKIAGGVIDLQYCNTDDMVADMFTK 730
BLAST of mRNA_H-akashiwo_Contig1251.2.1 vs. uniprot
Match: A0A8J5ZME6_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5ZME6_9ROSI) HSP 1 Score: 311 bits (796), Expect = 7.140e-92 Identity = 221/692 (31.94%), Postives = 342/692 (49.42%), Query Frame = 1
Query: 22 PNGNSIAETSIKVCCQRMRASLHSSNLSGSYWSEALLHSVETTSRLPTKGLPNHISPYESWYGHRPSILHLRSFGASCYAYLPVELRPGKLSSKGVLHKFLSYGSST-GY-----SDSGASSSSHDDSSANSLPSVNLPAPPV--SSPSTKNLSPSGTGRXXXXXXXXXXXXXXXXXXSRTANYARKLRRTSARLPQSPGEARRLPDWPEWRDALNGELSSITDKNTYTLVDRPPHANVIGTLSVLSKKSDADGHL---------VSHTQEFGVDYRQTYSPVVNAASLRLLLAISANKGYA-----------------------PPGFVDPEHPDKVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYIRREGGRELM-VAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRNKCFYLSQTSFIKDALSKFGLDYLPACAAPMDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAERAFRYLKGTQSEPL--RLGGDLVLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPILWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLLVSKKNRHFHVSYHLAKEQVSLGTIRMFFIKTHNQVADIFTK 1968
P N + E + R L S L ++W+EA+ SV +RLPT + + +P+E+W+G +P++ HL+ FG CYA++PVE R KL + V F+ Y S+ GY S G S + + S N + S NL P+ +RT +R +A L + + D W+ A+ EL I T+ LV+RP H VIG V K +ADG L ++Q++G+D+ +T++PV +++LL A++A K + P GF DKV++L KALYGL+Q+PR WY + +L LGF++S E+ LY++R G L+ V++YVDDL+V+GS L+++FK+ + +++TD G +T LG++V ++ ++ ++SQ F LSKF + P+ L+ + E D YRS+VG L ++ TRP++ F V L R HF+AA+R RY+KGT + + + +L L +SDSD+ D KS +GY LG WSSK Q V ST EAEY+A ++V +WLR LL+DL Q E T ++ DN + + A + + K +HF + H +E G I + + + Q+ADI TK
Sbjct: 88 PQQNGVCERKNRTVLNMARCLLFQSKLPSNFWAEAVNTSVYLLNRLPTHAVKDK-TPFEAWHGLKPTVSHLKVFGCVCYAHIPVEKR-NKLEERAVPVIFVGYSSTKKGYRVYNPSTKGILVSRDVKFDEDKIWSWNGDNAKLFEEDQSNDNLEPA------EDEPSNEDFDDTPVRGTRTIEDI--YQRCNAALLEPSDYEEAVKD-KHWKKAMEAELDMIHKNETWELVNRPDHQKVIGVKWVFRTKYNADGSLNKYKARLVVKGYSQQYGIDFMETFAPVARLDTIKLLFALAAQKDWKVHQLDVKSAFLNGFLREEIFIEQPEGFKVQGQEDKVYRLKKALYGLKQAPRAWYDRIDTYLSRLGFEKSVSEATLYVKRLKGETLLIVSLYVDDLLVTGSKEELINEFKEQMLKVFEMTDLGVMTYFLGMEV--NQSDQGIFISQHIFALKILSKFCMANCKPVNTPVAQGEKLSRSES--VERVDEKEYRSLVGCLLYLTA-TRPDIMFGVSLLSRFMHCCNVTHFKAAKRILRYVKGTLNHGVMFKKEKELKLIGYSDSDWAGSVDDMKSTSGYFFTLGSGVFCWSSKKQQTVAQSTAEAEYIAAAAAVNQAIWLRKLLSDLNEEQSEATEIMVDNQSAVAIAKNPVFHGKTKHFKIKLHFVRETEQSGEISLIYCSSQEQLADILTK 763
BLAST of mRNA_H-akashiwo_Contig1251.2.1 vs. uniprot
Match: A5B0R8_VITVI (Integrase catalytic domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5B0R8_VITVI) HSP 1 Score: 312 bits (800), Expect = 1.540e-91 Identity = 207/687 (30.13%), Postives = 332/687 (48.33%), Query Frame = 1
Query: 22 PNGNSIAETSIKVCCQRMRASLHSSNLSGSYWSEALLHSVETTSRLPTKGLPNHISPYESWYGHRPSILHLRSFGASCYAYLPVELRPGKLSSKGVLHKFLSYGSST-GYSDSGASSSSHDDSSANSLPSVNLPAPPVSSPSTKNLSPSGTGRXXXXXXXXXXXXXXXXXXSRTANYARKLRRTSARLPQSPGEARRLPDWPEWRDALNGELSSITDKNTYTLVDRPPHANVIGTLSVLSKKSDADGHLVSH---------TQEFGVDYRQTYSPVVNAASLRLLLAISANKGY-----------------------APPGFVDPEHPDKVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYIRREGGRELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRNKCFYLSQTSFIKDALSKFGL-DYLPACAAPMDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAERAFRYLKGTQSEPLRLG----GDLVLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPILWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLLVSKKNRHFHVSYHLAKEQVSLGTIRMFFIKTHNQVADIFTK 1968
P N ++E + + R L + ++W+EA+ SV +RLPTK L N +PYE WYG +P + HL+ FG+ CY ++P E + KL S+ + YG+ST GY ++ + S N+ +++ KN + + R + + + P D WR A+ EL I T+ LV+RP + VIG V K ++DG + H Q++GVDY++T++PV ++RLL ++A + P G V P D V+ L KALYGL+Q+PR WY + HL LGF RS E+ LY++ + L++++YVDD++V+G+ P L+ FK + +++TD G + LG++V++ ++ Q + D L KF + DY P + PM L+ G +E + +YRS++G+L ++ +RP++ F V L R +P KHF AA+R RY+KGT ++ DL L +S+SD+ D +S +GY+ LG WS K Q STVEAEY+A S++ +WL+ +L DLG Q E T ++ DN + + + + + +H + YH +E + + + NQ+ DIFTK
Sbjct: 188 PQQNGVSERKNRTVMEMARCLLFEKKMPSNFWAEAVNTSVYLLNRLPTKSLKNK-TPYEEWYGVKPFVNHLKIFGSICYYHVP-EPKRSKLDSRAQKGILIGYGTSTKGYRIFCLQTNKV-------VLSRNVKVDEMATWDCKNKKYAQSDVDFNNHEDFQTSKSVDDFPVRGIRSLEDIYQRCSLAITEPTSYVEAKDSEAWRRAMQEELKMINKNETWQLVERPKNHKVIGVKWVFKTKLNSDGSICKHKAKLVVKGYAQQYGVDYKETFAPVARYDTIRLLFVLAAQNSWHIHQLDVKSAFLNGFVDKEIYVEQPDGVVAPSKEDYVYLLRKALYGLKQAPRAWYETMDKHLTKLGFVRSQSEATLYVKTNDVQLLIISLYVDDMLVTGNQPKLIQSFKDEMNKVFEMTDLGAMKYFLGMEVMQSCSR--IFICQQKYAMDMLKKFKMQDYKPV-STPMTTNEKLSKDDG--SEKINEGLYRSLIGSLLYLTA-SRPDILFAVSVLSRFMHSPSEKHFSAAKRVLRYIKGTIDLGVQFSKSAEDDLKLLGYSNSDWGGCVDDSRSTSGYLFSLGLGCFTWSLKKQETTAQSTVEAEYIAAASAINQALWLKKILKDLGQEQVEATNIMCDNISAVSILKNPVFHGRTKHIKIKYHFIREVQQSNEVLLVHCSSDNQLVDIFTK 859 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1251.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1251.2.1 >prot_H-akashiwo_Contig1251.2.1 ID=prot_H-akashiwo_Contig1251.2.1|Name=mRNA_H-akashiwo_Contig1251.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=656bp LPTGRSNPNGNSIAETSIKVCCQRMRASLHSSNLSGSYWSEALLHSVETTback to top mRNA from alignment at H-akashiwo_Contig1251:47870..50250+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1251.2.1 ID=mRNA_H-akashiwo_Contig1251.2.1|Name=mRNA_H-akashiwo_Contig1251.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2381bp|location=Sequence derived from alignment at H-akashiwo_Contig1251:47870..50250+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1251:47870..50250+ >mRNA_H-akashiwo_Contig1251.2.1 ID=mRNA_H-akashiwo_Contig1251.2.1|Name=mRNA_H-akashiwo_Contig1251.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1968bp|location=Sequence derived from alignment at H-akashiwo_Contig1251:47870..50250+ (Heterosigma akashiwo CCMP452)back to top |