mRNA_H-akashiwo_Contig96.4.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig96.4.1 vs. uniprot
Match: A0A7S3XK24_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK24_HETAK) HSP 1 Score: 364 bits (934), Expect = 9.820e-127 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1 Query: 1 VNLITQDGDSFTVAREKVQISELIRTMFDDSLDESDDPQEIPLPNLKSPVLVKVIEFCKHYHKEKMARIPEPIKYGLQVADVVQDWYGQFVDDLVSKKEFEMLFDLILAANYLDIKPLLDLTCATVGLLMMNKTPDQIREAFGIDEEFSPELYDQLLKENKWSTEPPVERPAPGEKKLIID 543 VNLITQDGDSFTVAREKVQISELIRTMFDDSLDESDDPQEIPLPNLKSPVLVKVIEFCKHYHKEKMARIPEPIKYGLQVADVVQDWYGQFVDDLVSKKEFEMLFDLILAANYLDIKPLLDLTCATVGLLMMNKTPDQIREAFGIDEEFSPELYDQLLKENKWSTEPPVERPAPGEKKLIID Sbjct: 38 VNLITQDGDSFTVAREKVQISELIRTMFDDSLDESDDPQEIPLPNLKSPVLVKVIEFCKHYHKEKMARIPEPIKYGLQVADVVQDWYGQFVDDLVSKKEFEMLFDLILAANYLDIKPLLDLTCATVGLLMMNKTPDQIREAFGIDEEFSPELYDQLLKENKWSTEPPVERPAPGEKKLIID 218
BLAST of mRNA_H-akashiwo_Contig96.4.1 vs. uniprot
Match: A0A7S3UW02_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW02_HETAK) HSP 1 Score: 294 bits (752), Expect = 5.610e-99 Identity = 143/181 (79.01%), Postives = 161/181 (88.95%), Query Frame = 1 Query: 1 VNLITQDGDSFTVAREKVQISELIRTMFDDSLDESDDPQEIPLPNLKSPVLVKVIEFCKHYHKEKMARIPEPIKYGLQVADVVQDWYGQFVDDLVSKKEFEMLFDLILAANYLDIKPLLDLTCATVGLLMMNKTPDQIREAFGIDEEFSPELYDQLLKENKWSTEPPVERPAPGEKKLIID 543 VNLITQDGDSFTV+R+ V ISELI+TM D+SL E DDPQEIPLPNLKS VLVKVIEFCK+YHK+KMA IP PIKYGLQVADVVQDWYG++VD LV+ KEFEMLFDL+LAANYLDIK LLDL AT+GLL+MNKTPDQIRE G+DEEFSPE+++QL++E KWSTEP V RP PGEKKLI D Sbjct: 40 VNLITQDGDSFTVSRDIVMISELIKTMIDESLGEDDDPQEIPLPNLKSNVLVKVIEFCKYYHKDKMATIPRPIKYGLQVADVVQDWYGEYVDALVNNKEFEMLFDLVLAANYLDIKSLLDLASATIGLLIMNKTPDQIRETLGLDEEFSPEMHEQLMQEMKWSTEPAVPRPGPGEKKLIFD 220
BLAST of mRNA_H-akashiwo_Contig96.4.1 vs. uniprot
Match: A0A6V3BV71_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3BV71_HETAK) HSP 1 Score: 183 bits (464), Expect = 1.410e-55 Identity = 87/173 (50.29%), Postives = 122/173 (70.52%), Query Frame = 1 Query: 1 VNLITQDGDSFTVAREKVQISELIRTMFDDSLDESDDPQEIPLPNLKSPVLVKVIEFCKHYHKEKMARIPEPIKYGLQVADVVQDWYGQFVDDLVSKKEFEMLFDLILAANYLDIKPLLDLTCATVGLLMMNKTPDQIREAFGIDEEFSPELYDQLLKENKWSTEPPVERPAP 519 + L+T DG+SF +++ ++SEL++ M +D+ + +EI LPNLK VL KVIEFC +E MA IP+PIK+G QV DVVQ +G +VD +V+ +++ +L L+LAA YLD++PL DLTCA +GLL+MNKTPD+IRE FG++ FSPE+ L + NKWS EPP P Sbjct: 20 ITLVTSDGESFRISKAVARVSELVKNMMEDADETMQTQEEIRLPNLKGKVLAKVIEFCNLQVEEPMAEIPKPIKFGKQVRDVVQPAFGAYVDGMVAARDWLLLLQLVLAAQYLDVRPLADLTCAALGLLIMNKTPDEIRELFGVESPFSPEIEQLLRENNKWSVEPPPTASTP 192
BLAST of mRNA_H-akashiwo_Contig96.4.1 vs. uniprot
Match: A0A836CJ49_9STRA (Skp1 family, dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ49_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.610e-53 Identity = 90/168 (53.57%), Postives = 115/168 (68.45%), Query Frame = 1 Query: 1 VNLITQDGDSFTVAREKVQISELIRTMFDDSLDESDDPQEIPLPNLKSPVLVKVIEFCKHYHKEKMARIPEPIKYGLQVADVVQDWYGQFVDDLVSKKEFEMLFDLILAANYLDIKPLLDLTCATVGLLMMNKTPDQIREAFGIDEEFSPELYDQLLKENKWSTEPPV 504 V L+ GD+FTV R + +S++IR M +D D EIPLP ++ PVL KV+++C HY E M IP PIKYG VAD VQ WY +FVD L + E LF+LIL+ NYLD+KPLLDLT A GL++MNKTPD+IR GI++ F+PE+ QL E +WSTEPPV Sbjct: 15 VTLVAMGGDTFTVDRNVISLSQVIRVMLED--DGECVATEIPLPTVRGPVLAKVVDYCVHYQTEPMTEIPRPIKYGRTVADHVQPWYAEFVDAL----DKETLFELILSCNYLDVKPLLDLTSAVAGLMLMNKTPDEIRATLGIEQPFAPEVERQLRDEIRWSTEPPV 176
BLAST of mRNA_H-akashiwo_Contig96.4.1 vs. uniprot
Match: A0A835Z9K0_9STRA (Skp1 family, dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9K0_9STRA) HSP 1 Score: 173 bits (439), Expect = 6.980e-52 Identity = 87/165 (52.73%), Postives = 120/165 (72.73%), Query Frame = 1 Query: 1 VNLITQDGDSFTVAREKVQISELIRTMFDDSLDESDDPQEIPLPNLKSPVLVKVIEFCKHYHKEKMARIPEPIKYGLQVADVVQDWYGQFVDDLVSKKEFEMLFDLILAANYLDIKPLLDLTCATVGLLMMNKTPDQIREAFGIDEEFSPELYDQLLKENKWSTE 495 VNL++Q+GDSF V+ + ++SEL++TM DD DE + QEIPLPN+KS VL K+IEFC+HY ++ M I +P+K + +VVQDW+ FV + E E+LF+LILAANY+DIKPLLDLTCATV ++ KTP++IR+ F I +F+PE Q+ +ENKW E Sbjct: 28 VNLVSQEGDSFDVSIKVAKMSELVKTMIDDDADEDAEAQEIPLPNVKSSVLTKIIEFCRHYIEDPMNEIEKPLK-SANMQEVVQDWFANFV-----QVEQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEE 186
BLAST of mRNA_H-akashiwo_Contig96.4.1 vs. uniprot
Match: B7FNR9_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FNR9_PHATC) HSP 1 Score: 168 bits (426), Expect = 3.720e-50 Identity = 89/165 (53.94%), Postives = 117/165 (70.91%), Query Frame = 1 Query: 1 VNLITQDGDSFTVAREKVQISELIRTMFDDSLDESDDPQEIPLPNLKSPVLVKVIEFCKHYHKEKMARIPEPIKYGLQVADVVQDWYGQFVDDLVSKKEFEMLFDLILAANYLDIKPLLDLTCATVGLLMMNKTPDQIREAFGIDEEFSPELYDQLLKENKWSTE 495 VNLI++DGDSF+V ++SEL++ M D+ ++ D EIPLPN+KS VL KVIEFC+H+ +E M I +P+K + +ADVVQ WY FVD E +LF+LILAANY+DIKPLLDLTCATV ++ KTP+ IR+ FGI +FSPE Q+ +ENKW E Sbjct: 10 VNLISKDGDSFSVPLAVAKMSELVKGMIDEDAEDEGDKIEIPLPNVKSQVLNKVIEFCEHHLQEPMTEIEKPLKSQV-MADVVQKWYADFVD-----VEQVLLFELILAANYMDIKPLLDLTCATVAGMIKGKTPEDIRQTFGIQNDFSPEEEAQVREENKWCEE 168
BLAST of mRNA_H-akashiwo_Contig96.4.1 vs. uniprot
Match: A0A7S2SQM9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQM9_9STRA) HSP 1 Score: 167 bits (424), Expect = 1.120e-49 Identity = 87/165 (52.73%), Postives = 119/165 (72.12%), Query Frame = 1 Query: 1 VNLITQDGDSFTVAREKVQISELIRTMFDDSLDESDDPQEIPLPNLKSPVLVKVIEFCKHYHKEKMARIPEPIKYGLQVADVVQDWYGQFVDDLVSKKEFEMLFDLILAANYLDIKPLLDLTCATVGLLMMNKTPDQIREAFGIDEEFSPELYDQLLKENKWSTE 495 V L++Q+GD+F V + ++SEL++TM D DE D+ QEIPLPN+KS VL KVIEFC+HY ++ M I +P+K +++VVQ+WY FVD E E+LF+LILAANY+DIKPLLDLTCATV ++ KTP++IR+ F I +F+PE Q+ +ENKW E Sbjct: 24 VQLVSQEGDNFQVEAKVAKMSELVKTMLPDE-DEGDEVQEIPLPNVKSSVLGKVIEFCRHYKEDPMTEIEKPLKSST-MSEVVQEWYATFVD-----VEQEVLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEE 181
BLAST of mRNA_H-akashiwo_Contig96.4.1 vs. uniprot
Match: A0A836CN28_9STRA (Skp1 family, dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN28_9STRA) HSP 1 Score: 167 bits (422), Expect = 2.250e-49 Identity = 84/165 (50.91%), Postives = 121/165 (73.33%), Query Frame = 1 Query: 1 VNLITQDGDSFTVAREKVQISELIRTMFDDSLDESDDPQEIPLPNLKSPVLVKVIEFCKHYHKEKMARIPEPIKYGLQVADVVQDWYGQFVDDLVSKKEFEMLFDLILAANYLDIKPLLDLTCATVGLLMMNKTPDQIREAFGIDEEFSPELYDQLLKENKWSTE 495 V+L++Q+GDSF V+ + ++SEL++TM D+ L+E + QEIPLPN+KS VL KVIEFC+HY ++ M I +P+K + +VVQ+W+ +V + E E+LF+LILAANY+DIKPLLDLTCATV ++ KTP++IR+ F I +F+PE Q+ +ENKW E Sbjct: 23 VHLVSQEGDSFDVSVKVAKMSELVKTMLDEELEEDAEAQEIPLPNVKSSVLTKVIEFCRHYVEDPMNEIEKPLK-SANMQEVVQNWFATYV-----QVEQEVLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEE 181
BLAST of mRNA_H-akashiwo_Contig96.4.1 vs. uniprot
Match: A0A6V1AYU4_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A6V1AYU4_9STRA) HSP 1 Score: 166 bits (420), Expect = 3.020e-49 Identity = 85/165 (51.52%), Postives = 116/165 (70.30%), Query Frame = 1 Query: 1 VNLITQDGDSFTVAREKVQISELIRTMFDDSLDESDDPQEIPLPNLKSPVLVKVIEFCKHYHKEKMARIPEPIKYGLQVADVVQDWYGQFVDDLVSKKEFEMLFDLILAANYLDIKPLLDLTCATVGLLMMNKTPDQIREAFGIDEEFSPELYDQLLKENKWSTE 495 +NL++++GDSF V + Q+SEL+++M +D D D+ EIPLPN+K+ VL KVIEFC+H+ +E M I +P+K +ADVVQ WY +VD E +LF+LILAANY+DIKPLLDLTCATV ++ KTP++IR F I +FSPE Q+ +ENKW E Sbjct: 10 INLVSKEGDSFKVPVDVAQMSELVKSMMEDDNDTEDEVTEIPLPNVKATVLQKVIEFCQHHKEEPMTEIEKPLK-SQNMADVVQVWYANYVD-----VEQVVLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRTTFNISNDFSPEEEAQVREENKWCEE 168
BLAST of mRNA_H-akashiwo_Contig96.4.1 vs. uniprot
Match: A0A6U4FS63_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FS63_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.660e-48 Identity = 85/165 (51.52%), Postives = 114/165 (69.09%), Query Frame = 1 Query: 1 VNLITQDGDSFTVAREKVQISELIRTMFDDSLDESDDPQEIPLPNLKSPVLVKVIEFCKHYHKEKMARIPEPIKYGLQVADVVQDWYGQFVDDLVSKKEFEMLFDLILAANYLDIKPLLDLTCATVGLLMMNKTPDQIREAFGIDEEFSPELYDQLLKENKWSTE 495 + L++ +GD F V + ++SEL++TM DD DE D+ QEIPLPN+KS L VIEFC+HY E M I +P+K ++ +VVQDWY FV+ + E LFDLILAANY+DIKPLLDLTCATV ++ KTP++IR+ F I +F+PE Q+ +ENKW E Sbjct: 21 IGLLSSEGDRFEVPMQVAKMSELVKTMIDDDADE-DEQQEIPLPNVKSSTLGNVIEFCRHYQSEAMDEIEKPLK-SAEMREVVQDWYADFVN-----VDQEALFDLILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKCFNIVNDFTPEEEAQVREENKWCEE 178 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig96.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig96.4.1 >prot_H-akashiwo_Contig96.4.1 ID=prot_H-akashiwo_Contig96.4.1|Name=mRNA_H-akashiwo_Contig96.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=156bp MFDDSLDESDDPQEIPLPNLKSPVLVKVIEFCKHYHKEKMARIPEPIKYGback to top mRNA from alignment at H-akashiwo_Contig96:31507..32064+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig96.4.1 ID=mRNA_H-akashiwo_Contig96.4.1|Name=mRNA_H-akashiwo_Contig96.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=558bp|location=Sequence derived from alignment at H-akashiwo_Contig96:31507..32064+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig96:31507..32064+ >mRNA_H-akashiwo_Contig96.4.1 ID=mRNA_H-akashiwo_Contig96.4.1|Name=mRNA_H-akashiwo_Contig96.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=468bp|location=Sequence derived from alignment at H-akashiwo_Contig96:31507..32064+ (Heterosigma akashiwo CCMP452)back to top |