mRNA_H-akashiwo_Contig957.11.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig957.11.1 vs. uniprot
Match: D7FVP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVP2_ECTSI) HSP 1 Score: 110 bits (275), Expect = 2.280e-28 Identity = 57/100 (57.00%), Postives = 73/100 (73.00%), Query Frame = 1 Query: 31 LQAAMENARKNQEAGYSPGAGLKTADEQSDAAYADLINTCIDQQGISLSSDEVDGLAKGGTMWEDGQKAKKGKGLFGDMVDVFKALGGGAHITRRDDGSI 330 L +AM NAR N AG SPGAGL++A +Q+DAA+ADLI T +D QG++L +EV LA+ G M +D +KK KGLF DM DV AL GGAHI +RDDG++ Sbjct: 82 LSSAMANARANLAAGTSPGAGLESAFDQADAAFADLIVTSVDDQGVTLDDEEVQELAQSGMMDQD-STSKKSKGLFSDMKDVLGALSGGAHIVKRDDGTV 180
BLAST of mRNA_H-akashiwo_Contig957.11.1 vs. uniprot
Match: A0A835ZCH3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCH3_9STRA) HSP 1 Score: 100 bits (249), Expect = 2.760e-25 Identity = 52/100 (52.00%), Postives = 70/100 (70.00%), Query Frame = 1 Query: 31 LQAAMENARKNQEAGYSPGAGLKTADEQSDAAYADLINTCIDQQGISLSSDEVDGLAKGGTMWEDGQKAKKGKGLFGDMVDVFKALGGGAHITRRDDGSI 330 L A++NAR+N E G SPGAGL TA+EQ+DAAYADLI T +DQ+ +SL +++ L K G M + +++ +G GD+ DVF AL GGAHI R+ DG I Sbjct: 11 LAKALDNARRNLEEGKSPGAGLATAEEQADAAYADLILTSVDQKHLSLGDEDLAELTKAGMM-DSKSTSRRSRGWAGDIADVFNALKGGAHIQRQKDGRI 109
BLAST of mRNA_H-akashiwo_Contig957.11.1 vs. uniprot
Match: A0A5J4YNM4_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNM4_PORPP) HSP 1 Score: 99.8 bits (247), Expect = 6.400e-25 Identity = 56/108 (51.85%), Postives = 73/108 (67.59%), Query Frame = 1 Query: 10 GEKISEKLQAAMENARKNQEAGYSPGAGLKTADEQSDAAYADLINTCIDQQGISLSSDEVDGLA-KGGTMWEDGQKAKKGKGLFGDMVDVFKALGGGAHITRRDDGSI 330 GE++ EKL+ AM AR+NQ G SPGA +++++ + AAYADLI QQ LS E++ A +GG MWE+G K +K KG GD VD+ KAL GGAHI R+DDG I Sbjct: 8 GEEL-EKLKKAMALARENQRRGESPGANAESSEDAAYAAYADLIVQSSSQQQRELSDSELEVFAARGGQMWEEGSKQRKSKGPVGDFVDMIKALFGGAHIVRQDDGRI 114
BLAST of mRNA_H-akashiwo_Contig957.11.1 vs. uniprot
Match: A0A7R9XNM3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7R9XNM3_9CHLO) HSP 1 Score: 97.4 bits (241), Expect = 7.340e-23 Identity = 53/103 (51.46%), Postives = 72/103 (69.90%), Query Frame = 1 Query: 25 EKLQAAMENARKNQEAGYSPGAGLKTADEQSDAAYADLINTCID-QQGISLSSDEVDGLAKGGTMWEDGQKAKKGKGLFGDMVDVFKALGGGAHITRRDDGSI 330 E L+ AM NARKN G SPGAGL TA EQ++AA+ADLINT +D +L+ E+ L++GG M ++G KA+K GL D+V +F+ALG GAHI ++ DG + Sbjct: 117 ETLEFAMSNARKNSLEGLSPGAGLMTAQEQAEAAFADLINTSLDGADRNALTGAEITELSEGGRM-DEGSKARKSGGLLADVVGLFEALGKGAHIVKQKDGRV 218
BLAST of mRNA_H-akashiwo_Contig957.11.1 vs. uniprot
Match: A0A830HV35_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HV35_9CHLO) HSP 1 Score: 93.6 bits (231), Expect = 4.160e-21 Identity = 50/97 (51.55%), Postives = 68/97 (70.10%), Query Frame = 1 Query: 43 MENARKNQEAGYSPGAGLKTADEQSDAAYADLINTCID-QQGISLSSDEVDGLAKGGTMWEDGQKAKKGKGLFGDMVDVFKALGGGAHITRRDDGSI 330 M NARKN G SPGAGL TA EQ++AA+ADLINT +D +L+ E+ L++GG M ++G KA+K GL D+V +F+ALG GAHI ++ DG + Sbjct: 71 MSNARKNSLEGLSPGAGLMTAQEQAEAAFADLINTSLDGADRNALTGAEITELSEGGRM-DEGSKARKSGGLLADVVGLFEALGKGAHIVKQKDGRV 166
BLAST of mRNA_H-akashiwo_Contig957.11.1 vs. uniprot
Match: C1MJA6_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MJA6_MICPC) HSP 1 Score: 84.0 bits (206), Expect = 3.950e-18 Identity = 43/100 (43.00%), Postives = 68/100 (68.00%), Query Frame = 1 Query: 31 LQAAMENARKNQEAGYSPGAGLKTADEQSDAAYADLINTCIDQQGISLSSDEVDGLAKGGTMWEDGQKAKKGKGLFGDMVDVFKALGGGAHITRRDDGSI 330 + A+M AR + +G SPGAGL +A++Q++AA+AD+INT +D G +L +D LA+GG M + ++K G++ D+ D+F ALG GAHI R+ +G + Sbjct: 69 IAASMAAARACEASGMSPGAGLSSAEDQAEAAFADMINTTVDVTGEALDADARARLAEGGRM-DGASTSRKSGGMWSDVRDLFGALGKGAHIVRQKNGRV 167
BLAST of mRNA_H-akashiwo_Contig957.11.1 vs. uniprot
Match: A0A7S2FA39_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2FA39_9CHLO) HSP 1 Score: 80.1 bits (196), Expect = 2.870e-16 Identity = 45/87 (51.72%), Postives = 62/87 (71.26%), Query Frame = 1 Query: 31 LQAAMENARKNQEAGYSPGAGLKTADEQSDAAYADLINTCID-QQGISLSSDEVDGLAKGGTMWEDGQKAKKGKGLFGDMVDVFKAL 288 L+ AM NARKN G SPGAGL TA+EQ++AA+ADLINT +D +L+ E+ L++GG M ++G KA+K GL D+V +F+AL Sbjct: 122 LEFAMSNARKNSLEGLSPGAGLMTAEEQAEAAFADLINTSLDGADRNALTGAEITELSEGGRM-DEGSKARKSGGLLADVVGLFEAL 207 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig957.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig957.11.1 >prot_H-akashiwo_Contig957.11.1 ID=prot_H-akashiwo_Contig957.11.1|Name=mRNA_H-akashiwo_Contig957.11.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=111bp SNDGEKISEKLQAAMENARKNQEAGYSPGAGLKTADEQSDAAYADLINTCback to top mRNA from alignment at H-akashiwo_Contig957:365937..366269- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig957.11.1 ID=mRNA_H-akashiwo_Contig957.11.1|Name=mRNA_H-akashiwo_Contig957.11.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=333bp|location=Sequence derived from alignment at H-akashiwo_Contig957:365937..366269- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig957:365937..366269- >mRNA_H-akashiwo_Contig957.11.1 ID=mRNA_H-akashiwo_Contig957.11.1|Name=mRNA_H-akashiwo_Contig957.11.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=333bp|location=Sequence derived from alignment at H-akashiwo_Contig957:365937..366269- (Heterosigma akashiwo CCMP452)back to top |