mRNA_H-akashiwo_Contig124.3.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig124.3.1 vs. uniprot
Match: A0A7S2UU65_9STRA (Eukaryotic translation initiation factor 5A n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU65_9STRA) HSP 1 Score: 249 bits (636), Expect = 6.850e-79 Identity = 119/161 (73.91%), Postives = 141/161 (87.58%), Query Frame = 2
Query: 23 ETAATLDDYNFDQGEAGASLTIPMEAGQIRKGGHIVIKGHPCKVVSVSTSKTGKHGHAKCNFTATDIFTGKKYEDIVPSTHNTTVPNVFRNEYQLLDIQDDGFLSLMDDAGDTKEDIKLPEHPEGFKEQIQSEFDSGKSLAVTVLSAMGHSQVIAIKEDSS 505
E A LDD++FD GE+GASLTIPMEAGQIRKGGHIVIKG PCKVV+VSTSKTGKHGHAK NFTA DIFTGKKYEDIVP+TH T+VPNV R EYQL+DI DDG+LSL+ D+GDTK+D+ LP HPEGF ++I++ FD GKS+ +TVLSAMG QV+++KED+S
Sbjct: 3 EGGAKLDDFHFDTGESGASLTIPMEAGQIRKGGHIVIKGKPCKVVNVSTSKTGKHGHAKANFTAIDIFTGKKYEDIVPTTHTTSVPNVSRAEYQLIDISDDGYLSLLTDSGDTKDDLVLPTHPEGFADEIRAAFDEGKSMVLTVLSAMGTDQVVSMKEDTS 163
BLAST of mRNA_H-akashiwo_Contig124.3.1 vs. uniprot
Match: A0A835Z7R2_9STRA (Eukaryotic translation initiation factor 5A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7R2_9STRA) HSP 1 Score: 231 bits (590), Expect = 6.920e-72 Identity = 114/164 (69.51%), Postives = 140/164 (85.37%), Query Frame = 2
Query: 23 ETAAT---LDDYNFDQGEAGASLTIPMEAGQIRKGGHIVIKGHPCKVVSVSTSKTGKHGHAKCNFTATDIFTGKKYEDIVPSTHNTTVPNVFRNEYQLLDIQDDGFLSLMDDAGDTKEDIKLPEHPEGFKEQIQSEFDSGKSLAVTVLSAMGHSQVIAIKEDSS 505
ET+AT L++Y+F +AGAS T PM+AGQIRKGG+IVIKG PCKV +VSTSKTGKHGHAK NFTA DIFTGKK EDIVP++H T+VPNV R +YQLLDI DDGFLSL+ ++GDTK+D+KLP PEGF EQ+++EFD+GK+L VTV+SAMGH QV+A KED++
Sbjct: 3 ETSATDEALNNYDFTSSDAGASHTFPMDAGQIRKGGYIVIKGRPCKVANVSTSKTGKHGHAKANFTAIDIFTGKKLEDIVPTSHATSVPNVARVDYQLLDISDDGFLSLLTESGDTKDDLKLPGFPEGFDEQLRTEFDAGKTLIVTVVSAMGHDQVMAYKEDTT 166
BLAST of mRNA_H-akashiwo_Contig124.3.1 vs. uniprot
Match: D8LBS0_ECTSI (eIF-5a domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS0_ECTSI) HSP 1 Score: 231 bits (589), Expect = 2.830e-71 Identity = 113/165 (68.48%), Postives = 137/165 (83.03%), Query Frame = 2
Query: 8 STMAEETAATLDDYNFDQGEAGASLTIPMEAGQIRKGGHIVIKGHPCKVVSVSTSKTGKHGHAKCNFTATDIFTGKKYEDIVPSTHNTTVPNVFRNEYQLLDIQDDGFLSLMDDAGDTKEDIKLPEHPEGFKEQIQSEFDSGKSLAVTVLSAMGHSQVIAIKEDS 502
STMA E L+DY+F +AGAS TIP EAGQIRKGG+IVIKGHPCKVV+VSTSKTGKHGHAK NFTATDIFTGKK ED++PSTH T+VP V RNEYQLLDI DDGF SL+ + GDTK+D++LP +PEGF +I+++FD G +L VTV++AMGH Q++ KE+S
Sbjct: 37 STMATEDK--LNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGNEIKAKFDEGATLCVTVMAAMGHEQIVTYKEES 199
BLAST of mRNA_H-akashiwo_Contig124.3.1 vs. uniprot
Match: A0A6H5KDL5_9PHAE (eIF-5a domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL5_9PHAE) HSP 1 Score: 229 bits (584), Expect = 9.200e-70 Identity = 112/165 (67.88%), Postives = 137/165 (83.03%), Query Frame = 2
Query: 8 STMAEETAATLDDYNFDQGEAGASLTIPMEAGQIRKGGHIVIKGHPCKVVSVSTSKTGKHGHAKCNFTATDIFTGKKYEDIVPSTHNTTVPNVFRNEYQLLDIQDDGFLSLMDDAGDTKEDIKLPEHPEGFKEQIQSEFDSGKSLAVTVLSAMGHSQVIAIKEDS 502
STMA E L+DY+F +AGAS TIP EAGQIRKGG+IVIKGHPCKVV+VSTSKTGKHGHAK NFTATDIFTGKK ED++PSTH T+VP V RNEYQLLDI DDGF SL+ + GDTK+D++LP +PEGF +I+++F+ G +L VTV++AMGH Q++ KE+S
Sbjct: 91 STMATEDK--LNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGNEIKAKFEEGLTLCVTVMAAMGHEQIVTYKEES 253
BLAST of mRNA_H-akashiwo_Contig124.3.1 vs. uniprot
Match: K3WUI8_GLOUD (Eukaryotic translation initiation factor 5A n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUI8_GLOUD) HSP 1 Score: 224 bits (570), Expect = 5.240e-69 Identity = 110/155 (70.97%), Postives = 128/155 (82.58%), Query Frame = 2
Query: 41 DDYNFDQGEAGASLTIPMEAGQIRKGGHIVIKGHPCKVVSVSTSKTGKHGHAKCNFTATDIFTGKKYEDIVPSTHNTTVPNVFRNEYQLLDIQDDGFLSLMDDAGDTKEDIKLPEHPEGFKEQIQSEFDSGKSLAVTVLSAMGHSQVIAIKEDSS 505
DDY F+ +AGAS T P EAGQIRKGG I+IKGHPCKVVSVSTSKTGKHGHAKCNFTA DIFT KK EDIVPSTH T+VP V R+EY LLDI DD FLSLMDD+G+T+EDIKLP P+ F E+I+++FD+GK L +TVL A G QVI+ KED++
Sbjct: 3 DDYTFESTDAGASDTFPCEAGQIRKGGFIMIKGHPCKVVSVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVSRSEYTLLDITDDDFLSLMDDSGETREDIKLPTFPDNFAEEIRADFDAGKQLVLTVLKACGTEQVISKKEDTT 157
BLAST of mRNA_H-akashiwo_Contig124.3.1 vs. uniprot
Match: A0A485LC56_9STRA (Eukaryotic translation initiation factor 5A n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LC56_9STRA) HSP 1 Score: 223 bits (569), Expect = 7.660e-69 Identity = 105/153 (68.63%), Postives = 130/153 (84.97%), Query Frame = 2
Query: 41 DDYNFDQGEAGASLTIPMEAGQIRKGGHIVIKGHPCKVVSVSTSKTGKHGHAKCNFTATDIFTGKKYEDIVPSTHNTTVPNVFRNEYQLLDIQDDGFLSLMDDAGDTKEDIKLPEHPEGFKEQIQSEFDSGKSLAVTVLSAMGHSQVIAIKED 499
+DY+F+ +AGAS T PMEAGQI+KGG ++IKGHPCKVVS+STSKTGKHGHAKCNFTA DIFT KKYEDIVPSTHN +VP V R EY LLDI D+ ++SLMDD+GDT+ED+KLP PEGF ++I+++F++GK LAVT+L A G Q+I+ KED
Sbjct: 4 EDYSFESSDAGASETFPMEAGQIKKGGFMMIKGHPCKVVSISTSKTGKHGHAKCNFTALDIFTNKKYEDIVPSTHNCSVPFVSRAEYTLLDISDEDYVSLMDDSGDTREDVKLPAIPEGFGDEIRADFEAGKQLAVTILKACGIEQIISKKED 156
BLAST of mRNA_H-akashiwo_Contig124.3.1 vs. uniprot
Match: A0A067C6X2_SAPPC (Eukaryotic translation initiation factor 5A n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C6X2_SAPPC) HSP 1 Score: 222 bits (565), Expect = 2.960e-68 Identity = 105/155 (67.74%), Postives = 132/155 (85.16%), Query Frame = 2
Query: 41 DDYNFDQGEAGASLTIPMEAGQIRKGGHIVIKGHPCKVVSVSTSKTGKHGHAKCNFTATDIFTGKKYEDIVPSTHNTTVPNVFRNEYQLLDIQDDGFLSLMDDAGDTKEDIKLPEHPEGFKEQIQSEFDSGKSLAVTVLSAMGHSQVIAIKEDSS 505
+DY+F+ +AGASLT P EAGQ++KGG I+IKGHPCKVVSVSTSKTGKHGHAKCNFTA DIFT KKYEDIVPSTHN +VP V R EY LLDI D+ ++SLMDD+G+T+EDIKLP PEGF ++I+++F++GK L+++VL A G Q+IA KED++
Sbjct: 4 EDYHFESTDAGASLTYPSEAGQVKKGGFIMIKGHPCKVVSVSTSKTGKHGHAKCNFTALDIFTNKKYEDIVPSTHNCSVPFVSRAEYTLLDISDEDYVSLMDDSGETREDIKLPNIPEGFGDEIRADFEAGKQLSISVLRACGIEQIIAKKEDTT 158
BLAST of mRNA_H-akashiwo_Contig124.3.1 vs. uniprot
Match: A0A024UN82_9STRA (Eukaryotic translation initiation factor 5A n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024UN82_9STRA) HSP 1 Score: 221 bits (562), Expect = 8.930e-68 Identity = 106/155 (68.39%), Postives = 130/155 (83.87%), Query Frame = 2
Query: 41 DDYNFDQGEAGASLTIPMEAGQIRKGGHIVIKGHPCKVVSVSTSKTGKHGHAKCNFTATDIFTGKKYEDIVPSTHNTTVPNVFRNEYQLLDIQDDGFLSLMDDAGDTKEDIKLPEHPEGFKEQIQSEFDSGKSLAVTVLSAMGHSQVIAIKEDSS 505
+DY+F+ +AGAS T PMEAGQ++KGG I+IKGHPCKVVS++TSKTGKHGHAKCNFTA DIFT KKYEDIVPS+HN +VP V R EY LLDI D+ F+SLMD+ GDT+EDIKLP PEGF ++I+++FD+GK LAV+VL A G Q++A KED S
Sbjct: 4 EDYSFESSDAGASETYPMEAGQVKKGGFIMIKGHPCKVVSIATSKTGKHGHAKCNFTALDIFTNKKYEDIVPSSHNCSVPFVTRAEYTLLDITDEDFVSLMDENGDTREDIKLPLIPEGFGDEIRADFDAGKQLAVSVLKACGIEQIVAKKEDLS 158
BLAST of mRNA_H-akashiwo_Contig124.3.1 vs. uniprot
Match: A0A8K1CGM3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGM3_PYTOL) HSP 1 Score: 220 bits (561), Expect = 1.180e-67 Identity = 105/155 (67.74%), Postives = 127/155 (81.94%), Query Frame = 2
Query: 41 DDYNFDQGEAGASLTIPMEAGQIRKGGHIVIKGHPCKVVSVSTSKTGKHGHAKCNFTATDIFTGKKYEDIVPSTHNTTVPNVFRNEYQLLDIQDDGFLSLMDDAGDTKEDIKLPEHPEGFKEQIQSEFDSGKSLAVTVLSAMGHSQVIAIKEDSS 505
DDY F+ +AGAS T PMEAGQI+K G I+IKGHPCKVV+VSTSKTGKHGHAKCNFTA DIFT KK EDIVPSTH T+VP V R EY LLDI +D F+SLMD++GDT+ED+KLP +P+GF +I+S+F+ GK L VTVL A G Q+I+ KED++
Sbjct: 3 DDYTFESTDAGASETYPMEAGQIKKNGFIMIKGHPCKVVNVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVSRKEYTLLDISEDDFVSLMDESGDTREDVKLPSYPDGFANEIRSDFEDGKQLVVTVLKACGTEQIISKKEDTT 157
BLAST of mRNA_H-akashiwo_Contig124.3.1 vs. uniprot
Match: A0A5D6XTX1_9STRA (Eukaryotic translation initiation factor 5A n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTX1_9STRA) HSP 1 Score: 219 bits (558), Expect = 3.340e-67 Identity = 107/155 (69.03%), Postives = 126/155 (81.29%), Query Frame = 2
Query: 41 DDYNFDQGEAGASLTIPMEAGQIRKGGHIVIKGHPCKVVSVSTSKTGKHGHAKCNFTATDIFTGKKYEDIVPSTHNTTVPNVFRNEYQLLDIQDDGFLSLMDDAGDTKEDIKLPEHPEGFKEQIQSEFDSGKSLAVTVLSAMGHSQVIAIKEDSS 505
+DY F+ +AGAS T P EAGQIRKGG I+IKGHPCKVVSVSTSKTGKHGHAKCNFTA DIFT KK EDIVPSTH T+VP V R EY LLDI DD F++LMDD GDT++DIKLP P+ F ++I+++FDSGK L VTVL A G Q+I+ KED++
Sbjct: 4 EDYTFESTDAGASDTYPCEAGQIRKGGFIMIKGHPCKVVSVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVARAEYTLLDISDDDFVTLMDDGGDTRDDIKLPTFPDNFADEIRADFDSGKQLVVTVLKACGIEQIISKKEDTT 158 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig124.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig124.3.1 >prot_H-akashiwo_Contig124.3.1 ID=prot_H-akashiwo_Contig124.3.1|Name=mRNA_H-akashiwo_Contig124.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=165bp MAEETAATLDDYNFDQGEAGASLTIPMEAGQIRKGGHIVIKGHPCKVVSVback to top mRNA from alignment at H-akashiwo_Contig124:560613..561817+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig124.3.1 ID=mRNA_H-akashiwo_Contig124.3.1|Name=mRNA_H-akashiwo_Contig124.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1205bp|location=Sequence derived from alignment at H-akashiwo_Contig124:560613..561817+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig124:560613..561817+ >mRNA_H-akashiwo_Contig124.3.1 ID=mRNA_H-akashiwo_Contig124.3.1|Name=mRNA_H-akashiwo_Contig124.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=495bp|location=Sequence derived from alignment at H-akashiwo_Contig124:560613..561817+ (Heterosigma akashiwo CCMP452)back to top |