mRNA_H-akashiwo_Contig948.5.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig948.5.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 327 bits (838), Expect = 8.390e-110 Identity = 169/202 (83.66%), Postives = 172/202 (85.15%), Query Frame = 1 Query: 1 LMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKNAS*PQCGSHAYSPGSKPSSLALNLYRSMVGTLAWVANWARPELAFTVHKLQRTQINPSPNILRQSSVRFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWS 606 LMVAVYVDDLVISGSSQA+VSEFKQSLASKY+LTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACK +PG K NLYRSMVGTLAWVANW RPELAFTVHKLQRTQINP P FRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWS Sbjct: 31 LMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPL-DHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWS 231
BLAST of mRNA_H-akashiwo_Contig948.5.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK) HSP 1 Score: 228 bits (582), Expect = 3.560e-72 Identity = 122/153 (79.74%), Postives = 123/153 (80.39%), Query Frame = 1 Query: 1 LMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKNAS*PQCGSHAYSPGSKPSSLALNLYRSMVGTLAWVANWARPELAFTVHKLQRTQINPSPNILRQSSVRFRYL 459 LMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACK +PG K NLYRSMVGTLAWVANW RPELAFTVHKLQRTQINP P FRYL Sbjct: 117 LMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPI-DHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268
BLAST of mRNA_H-akashiwo_Contig948.5.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 150 bits (378), Expect = 2.770e-38 Identity = 77/202 (38.12%), Postives = 126/202 (62.38%), Query Frame = 1 Query: 4 MVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGL-DYLPACKNAS*PQCGSHAYSPGSKPSSLALNLYRSMVGTLAWVANWARPELAFTVHKLQRTQINPSPNILRQSSVRFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWS 606 +++VYVDD+V++ S ++ +S K++++ YN++D GE+ ILGIKV RD+ + LSQ SFI++A KF + Y P + + + S+ +RS+VGT+ W+A W PE+A+++H L + +PS N L S RYL T+ + + LGG L L A++D+DFC++R G+S +G+ +FLG +PI+WS Sbjct: 677 LISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWS 878
BLAST of mRNA_H-akashiwo_Contig948.5.1 vs. uniprot
Match: A0A507DX52_9FUNG (DNA-directed DNA polymerase (Fragment) n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DX52_9FUNG) HSP 1 Score: 122 bits (306), Expect = 2.130e-30 Identity = 70/202 (34.65%), Postives = 114/202 (56.44%), Query Frame = 1 Query: 7 VAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKNAS*PQCGSHAYSPGSKPSSLALNLYRSMVGTLAWVANWARPELAFTVHKLQRTQINPSPNILRQSSVRFRYLKGTQSESLRLGGDLV-LRAFSDSDFCNDRVDGKSVTGYILFLGDA-PIVWS 606 ++VY+DDL I +++ +S K SL +K+N+TD GE+ LG++V D + +L Q S++ D L +F + K + PQ G YR +VG+L ++ RP++A V L R NPSP L+ + RYL+GT + SL +GG+ V L +SD+D+ N+ +D +S+TGY+ +G+A P+ W+ Sbjct: 70 ISVYIDDLFIFAKNESEISSIKASLHNKFNMTDLGEVNHYLGMRVRHDYTRRVIYLDQESYVNDILERF----VENTKTSPNPQEGE----------------YREIVGSLMYLMICTRPDIAVAVSMLSRFASNPSPQHLQAAKRVLRYLRGTSTYSLCIGGNNVTLHGYSDADWGNNIIDRRSITGYLFCIGNAGPVTWA 251
BLAST of mRNA_H-akashiwo_Contig948.5.1 vs. uniprot
Match: A0A177U600_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U600_9BASI) HSP 1 Score: 120 bits (300), Expect = 7.110e-28 Identity = 71/206 (34.47%), Postives = 114/206 (55.34%), Query Frame = 1 Query: 1 LMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKNAS*PQCGSHA-YSPGSKPSSLAL--NLYRSMVGTLAWVANWARPELAFTVHKLQRTQINPSPNILRQSSVRFRYLKGTQSESLRLG-GDLV-LRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVW 603 +++ VYVDD+ I+ ++ +VS+ K+ S + +TD G LT +LGI+++R K + +SQT ++ + ++G+D +CK A+ P S P P+S A + Y +++G L W+A R ++AF V KL R NPS + + + RYL GT+ LR DL L +SDSD D +SVT Y+ +L P+ W Sbjct: 354 VIILVYVDDVAIAAPTEEMVSDIKKQFTSWFKMTDNGPLTSMLGIRILRSKCGRVATMSQTGYVDQIIKRYGMD---SCKPANTPMAESFKDLVPREGPTSTAKERHFYAALIGCLLWLAQGTRMDIAFAVGKLARFMANPSDDHVSAAKRVLRYLAGTRELGLRFRHSDLAQLVGYSDSDHGADPTTRRSVTCYVFYLYGNPVTW 556
BLAST of mRNA_H-akashiwo_Contig948.5.1 vs. uniprot
Match: A0A507DR08_9FUNG (DNA-directed DNA polymerase (Fragment) n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DR08_9FUNG) HSP 1 Score: 120 bits (300), Expect = 7.720e-28 Identity = 72/206 (34.95%), Postives = 119/206 (57.77%), Query Frame = 1 Query: 7 VAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKNAS*P--QCGSHAYSPGSKPSSL--ALNLYRSMVGTLAWVANWARPELAFTVHKLQRTQINPSPNILRQSSVRFRYLKGTQSESLRLGGDLV-LRAFSDSDFCNDRVDGKSVTGYILFLGDA-PIVWS 606 ++VYVDDL+I +++ +S K SL +++N T+ G++ LG++V RD +L Q S++ D L +FG+ CK + P Q Y + +S YR +VG+L ++ RP++A V L R NPSP L+ + RYL+GT + SL +GG+ V L +SD+D+ N+ +D +S+TGY+ +G+A P+ W+ Sbjct: 417 ISVYVDDLLIFAKNKSEMSSIKASLHNEFNTTNLGKVNHYLGMRVRRDYTRHVIYLDQESYVNDILERFGMQ---DCKPVNTPMDQTKLEPYEVENTKTSPNPQEGEYREIVGSLMYLMICTRPDIAVAVSMLSRFASNPSPQHLQAAKRVLRYLRGTSTYSLCIGGNNVTLHGYSDADWGNNIIDRRSITGYLFCIGNAGPVTWA 619
BLAST of mRNA_H-akashiwo_Contig948.5.1 vs. uniprot
Match: UPI00080A5E7B (uncharacterized mitochondrial protein AtMg00810-like n=4 Tax=Phaseolus angularis TaxID=3914 RepID=UPI00080A5E7B) HSP 1 Score: 115 bits (289), Expect = 4.230e-27 Identity = 69/207 (33.33%), Postives = 112/207 (54.11%), Query Frame = 1 Query: 1 LMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKNAS*PQCGSHAYSPGSKPSSLALNLYRSMVGTLAWVANWARPELAFTVHKLQRTQINPSPNILRQSSVRFRYLKGTQSESLRLGG-----DLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWS 606 L+V +YVDDL++ GS + ++SEFK L S++ ++D G+L+ LGI+ + H Q+ ++ D L +F + C A+ P ++ L YRS+VG+L ++ N RP+L++ V + R P + L RYL+GT S + LG ++ + ++SD+D+C D+ D KS GYI F+G PI WS Sbjct: 75 LIVCLYVDDLLVIGSCEELISEFKLQLLSEFEMSDLGKLSYFLGIEFTETENGIVMH--QSRYVLDLLKRFE---MVDCNAANTPAEVGLRLEKEPDEEAVDLTAYRSIVGSLRYLCN-TRPDLSYNVGVVSRYMECPRMSHLNAVKRILRYLQGTHSYGILLGRGETREEVQITSYSDADWCGDKEDRKSTAGYIFFMGGTPISWS 275
BLAST of mRNA_H-akashiwo_Contig948.5.1 vs. uniprot
Match: A0A1S3TG16_VIGRR (uncharacterized protein LOC106755098 n=1 Tax=Vigna radiata var. radiata TaxID=3916 RepID=A0A1S3TG16_VIGRR) HSP 1 Score: 111 bits (278), Expect = 1.270e-26 Identity = 69/207 (33.33%), Postives = 110/207 (53.14%), Query Frame = 1 Query: 1 LMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKNAS*PQCGSHAYSPGSKPSSLALNLYRSMVGTLAWVANWARPELAFTVHKLQRTQINPSPNILRQSSVRFRYLKGTQSESLRL-----GGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWS 606 ++V +YVDDL+I+GSS + +FK + ++ ++D G+L+ LGI+ + H Q+ + D L KF + + C A+ P + + YR MVG+L ++ N RP+++++V + R NP + L RYLKGT + L GGD+ + A+S SD+C D+ D KS+ GY+ FL API WS Sbjct: 29 VIVCLYVDDLLITGSSVQKIVDFKLQMLQEFEISDLGQLSYFLGIEFTKTDEGILMH--QSRYALDMLTKFNMLH---CNPANTPTEMGVKLEKDLEEEVVDPTKYRRMVGSLRYLCN-TRPDISYSVGLVSRFMQNPRISHLNAIKRILRYLKGTTKYGILLPKSGSGGDVRVTAYSYSDWCGDKGDRKSIAGYVFFLDGAPISWS 229
BLAST of mRNA_H-akashiwo_Contig948.5.1 vs. uniprot
Match: A0A151S6M8_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151S6M8_CAJCA) HSP 1 Score: 116 bits (291), Expect = 1.300e-26 Identity = 73/204 (35.78%), Postives = 115/204 (56.37%), Query Frame = 1 Query: 13 VYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKNAS*PQCGSHAYSPGSKPSSLALN--LYRSMVGTLAWVANWARPELAFTVHKLQRTQINPSPNILRQSSVR--FRYLKGTQSESLRL--GGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWS 606 +YVDD++I+GSS + +S F + L + L D G L LG++ RD +L QT ++ D L KF L+++ +C P + S + + L N LYR +G L ++ N RP++A++V++L +Q +P + SV+ FRYLKGT + L + DL + FSD+D+ + D KSV GY +FLG++ I WS Sbjct: 959 IYVDDIIITGSSSSFLSSFIKQLNIMFALKDLGSLHYFLGVEACRDASG--LYLKQTKYVLDLLKKFNLEHVSSCPT---PMVTGRSLS---EEAELMKNPTLYRRAIGVLQYLTN-TRPDIAYSVNRL--SQYMQAPTTIHWQSVKRVFRYLKGTMNHCLHIKPSVDLDITGFSDADWATNIEDRKSVAGYCVFLGESLITWS 1151
BLAST of mRNA_H-akashiwo_Contig948.5.1 vs. uniprot
Match: UPI001F5EB428 (uncharacterized mitochondrial protein AtMg00810-like n=2 Tax=Vigna umbellata TaxID=87088 RepID=UPI001F5EB428) HSP 1 Score: 113 bits (283), Expect = 1.480e-26 Identity = 68/207 (32.85%), Postives = 111/207 (53.62%), Query Frame = 1 Query: 1 LMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKNAS*PQCGSHAYSPGSKPSSLALNLYRSMVGTLAWVANWARPELAFTVHKLQRTQINPSPNILRQSSVRFRYLKGTQSESLRL-----GGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWS 606 ++V +YVDD++I+GSS +++FK + ++ ++D G+L+ L I+ H Q+ +I D L KF +D C +A+ P + ++ YR MVG+L ++ N RP+++++V + R NP + L RYLKGT + L GG++ + A+SDSD+C D+ D KS GY+ F API WS Sbjct: 29 VIVCLYVDDMLITGSSDERINKFKAQMLHEFEMSDLGKLSYFLRIEFTTTDTGMMMH--QSRYITDMLTKFNMDQ---CNSATTPAEVGIKLEKDPEEEAVDPTEYRRMVGSLRYLCN-TRPDISYSVGLVSRFMQNPRVSHLNAVKRILRYLKGTIEYGILLPKHGSGGEVRVIAYSDSDWCGDKGDRKSTAGYVFFFDGAPISWS 229 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig948.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig948.5.1 >prot_H-akashiwo_Contig948.5.1 ID=prot_H-akashiwo_Contig948.5.1|Name=mRNA_H-akashiwo_Contig948.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=95bp MVGTLAWVANWARPELAFTVHKLQRTQINPSPNILRQSSVRFRYLKGTQSback to top mRNA from alignment at H-akashiwo_Contig948:117560..118168- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig948.5.1 ID=mRNA_H-akashiwo_Contig948.5.1|Name=mRNA_H-akashiwo_Contig948.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=609bp|location=Sequence derived from alignment at H-akashiwo_Contig948:117560..118168- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig948:117560..118168- >mRNA_H-akashiwo_Contig948.5.1 ID=mRNA_H-akashiwo_Contig948.5.1|Name=mRNA_H-akashiwo_Contig948.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=285bp|location=Sequence derived from alignment at H-akashiwo_Contig948:117560..118168- (Heterosigma akashiwo CCMP452)back to top |