mRNA_H-akashiwo_Contig93.33.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig93.33.1
Unique NamemRNA_H-akashiwo_Contig93.33.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig93.33.1 vs. uniprot
Match: A0A7S3XL48_HETAK (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL48_HETAK)

HSP 1 Score: 143 bits (360), Expect = 3.040e-39
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1
Query:   49 MKTEDTHSMFLETLKDRGHQITVATAESNDLRLIAFGAPLYDNIILLCPEWEEGGSVKVDDVMGLVEGG 255
            MKTEDTHSMFLETLKDRGHQITVATAESNDLRLIAFGAPLYDNIILLCPEWEEGGSVKVDDVMGLVEGG
Sbjct:    1 MKTEDTHSMFLETLKDRGHQITVATAESNDLRLIAFGAPLYDNIILLCPEWEEGGSVKVDDVMGLVEGG 69          
BLAST of mRNA_H-akashiwo_Contig93.33.1 vs. uniprot
Match: A0A6A0GVE6_HYAAZ (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit n=3 Tax=Hyalella azteca TaxID=294128 RepID=A0A6A0GVE6_HYAAZ)

HSP 1 Score: 75.1 bits (183), Expect = 5.890e-14
Identity = 36/84 (42.86%), Postives = 55/84 (65.48%), Query Frame = 1
Query:    7 GRVGGKRTLVMVDAMKTEDTHSMFLETLKDRGHQITVATAESNDLRLIAFGAPLYDNIILLCPEWEE-GGSVKVDDVMGLVEGG 255
            G     +TLV+VD + T +THS+FL+ L DRGH +T+ +A+   L+L  +G  LYDN+IL  P  EE GG++ V+ ++  V+ G
Sbjct:   13 GCASATKTLVLVDTLATRETHSIFLKALTDRGHDLTIKSADEPSLQLARYGEYLYDNLILFAPGVEEFGGALSVEAIIEFVDEG 96          
BLAST of mRNA_H-akashiwo_Contig93.33.1 vs. uniprot
Match: UPI001E670CA8 (dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit-like isoform X1 n=3 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E670CA8)

HSP 1 Score: 74.7 bits (182), Expect = 8.430e-14
Identity = 32/80 (40.00%), Postives = 57/80 (71.25%), Query Frame = 1
Query:   19 GKRTLVMVDAMKTEDTHSMFLETLKDRGHQITVATAESNDLRLIAFGAPLYDNIILLCPEWEE-GGSVKVDDVMGLVEGG 255
            G  TLV+VD + T +THS+FL++L++RGH+++V  A+   L+L  +G  +Y N+++L P  EE GG++ V+ ++  ++GG
Sbjct:   33 GANTLVLVDTLATRETHSIFLKSLQERGHEVSVKAADDPSLQLSRYGEYIYQNLVILAPGVEEFGGALSVETIVEFIDGG 112          
BLAST of mRNA_H-akashiwo_Contig93.33.1 vs. uniprot
Match: A0A8J5MW56_HOMAM (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit n=2 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5MW56_HOMAM)

HSP 1 Score: 74.3 bits (181), Expect = 1.130e-13
Identity = 33/80 (41.25%), Postives = 57/80 (71.25%), Query Frame = 1
Query:   19 GKRTLVMVDAMKTEDTHSMFLETLKDRGHQITVATAESNDLRLIAFGAPLYDNIILLCPEWEE-GGSVKVDDVMGLVEGG 255
            G  TLV+VD + T +THS+FL++L++RGH+++V  A+   L+L  +G  +Y N+++L P  EE GG++ V+ ++  V+GG
Sbjct:   16 GFNTLVLVDTLATRETHSIFLKSLQERGHEVSVKAADDPSLQLSRYGEYIYQNLVILAPGVEEFGGALSVETIVEFVDGG 95          
BLAST of mRNA_H-akashiwo_Contig93.33.1 vs. uniprot
Match: T1FNY1_HELRO (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1FNY1_HELRO)

HSP 1 Score: 74.3 bits (181), Expect = 1.150e-13
Identity = 34/79 (43.04%), Postives = 54/79 (68.35%), Query Frame = 1
Query:   22 KRTLVMVDAMKTEDTHSMFLETLKDRGHQITVATAESNDLRLIAFGAPLYDNIILLCPEWEE-GGSVKVDDVMGLVEGG 255
            +RTLV++D++  ++THS+F +TLKDRG ++T   A+   L L+ +G  LYDN+IL  P  EE GG++ V  +   ++GG
Sbjct:   29 QRTLVLLDSLTIKETHSIFFQTLKDRGFELTFKAADDAGLSLVKYGEYLYDNLILFSPSVEEFGGNIDVPAISSFIDGG 107          
BLAST of mRNA_H-akashiwo_Contig93.33.1 vs. uniprot
Match: A0A5B7ERW2_PORTR (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=A0A5B7ERW2_PORTR)

HSP 1 Score: 73.6 bits (179), Expect = 1.340e-13
Identity = 33/77 (42.86%), Postives = 55/77 (71.43%), Query Frame = 1
Query:   28 TLVMVDAMKTEDTHSMFLETLKDRGHQITVATAESNDLRLIAFGAPLYDNIILLCPEWEE-GGSVKVDDVMGLVEGG 255
            TLV+VD + T +THS+FL++L++RGH++TV  A+   L+L  +G  LY N+++  P  EE GG++ V+ ++  V+GG
Sbjct:   79 TLVLVDTLATRETHSIFLKSLQERGHELTVKVADDPSLQLSRYGEYLYQNLVIFAPGVEEFGGALSVETIVEFVDGG 155          
BLAST of mRNA_H-akashiwo_Contig93.33.1 vs. uniprot
Match: UPI0018A765D2 (dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit-like n=1 Tax=Penaeus monodon TaxID=6687 RepID=UPI0018A765D2)

HSP 1 Score: 73.6 bits (179), Expect = 2.120e-13
Identity = 32/78 (41.03%), Postives = 56/78 (71.79%), Query Frame = 1
Query:   22 KRTLVMVDAMKTEDTHSMFLETLKDRGHQITVATAESNDLRLIAFGAPLYDNIILLCPEWEE-GGSVKVDDVMGLVEG 252
            + TLV+VD + T +THS+FL++L++RGH++TV  A+   L+L  FG  +Y N+++L P  EE GG++ V+ ++  ++G
Sbjct:   50 QNTLVLVDTLATRETHSIFLKSLQERGHEVTVKAADDPSLQLSRFGEYIYQNLVILAPGVEEFGGALSVEAIVEFIDG 127          
BLAST of mRNA_H-akashiwo_Contig93.33.1 vs. uniprot
Match: A0A0P4W9M7_SCYOL (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit n=2 Tax=Portunidae TaxID=6757 RepID=A0A0P4W9M7_SCYOL)

HSP 1 Score: 73.2 bits (178), Expect = 2.950e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = 1
Query:   28 TLVMVDAMKTEDTHSMFLETLKDRGHQITVATAESNDLRLIAFGAPLYDNIILLCPEWEE-GGSVKVDDVMGLVEGG 255
            TLV+VD + T +THS+FL++L++RGH++TV  A+   L+L  +G  LY N+++  P  EE GG++ V+ ++  ++GG
Sbjct:   32 TLVLVDTLATRETHSIFLKSLQERGHELTVKVADDPSLQLSRYGEYLYQNLVIFAPGVEEFGGALSVETIVEFIDGG 108          
BLAST of mRNA_H-akashiwo_Contig93.33.1 vs. uniprot
Match: A0A1I7SWV0_BURXY (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit n=3 Tax=Bilateria TaxID=33213 RepID=A0A1I7SWV0_BURXY)

HSP 1 Score: 72.4 bits (176), Expect = 5.560e-13
Identity = 36/78 (46.15%), Postives = 54/78 (69.23%), Query Frame = 1
Query:   25 RTLVMVDAMKTEDTHSMFLETLKDRGHQITVATAESNDLRLIAFGAPLYDNIILLCPEWEE-GGSVKVDDVMGLVEGG 255
            R LV++D  K E THS++L++LKDRG  +T+  A+   L LI FG  LYD++I+L P+ EE GGS+  +++   V+GG
Sbjct:   34 RVLVLLDDPKIEQTHSIYLKSLKDRGFVLTIKKADDPSLALIKFGEFLYDHVIVLAPKVEEFGGSLSAEELAKFVDGG 111          
BLAST of mRNA_H-akashiwo_Contig93.33.1 vs. uniprot
Match: A0A8J4Y5W3_CHIOP (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit n=1 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J4Y5W3_CHIOP)

HSP 1 Score: 72.0 bits (175), Expect = 7.620e-13
Identity = 31/77 (40.26%), Postives = 55/77 (71.43%), Query Frame = 1
Query:   28 TLVMVDAMKTEDTHSMFLETLKDRGHQITVATAESNDLRLIAFGAPLYDNIILLCPEWEE-GGSVKVDDVMGLVEGG 255
            TLV+VD + T +THS+FL++L++RGH++TV  A+   L+L  +G  +Y N+++  P  EE GG++ V+ ++  ++GG
Sbjct:   63 TLVLVDTLATRETHSIFLKSLQERGHELTVKVADDPSLQLSRYGEYVYQNLVIFAPGVEEFGGALSVETIVEFIDGG 139          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig93.33.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XL48_HETAK3.040e-39100.00Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A6A0GVE6_HYAAZ5.890e-1442.86Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
UPI001E670CA88.430e-1440.00dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A8J5MW56_HOMAM1.130e-1341.25Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
T1FNY1_HELRO1.150e-1343.04Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A5B7ERW2_PORTR1.340e-1342.86Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
UPI0018A765D22.120e-1341.03dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A0P4W9M7_SCYOL2.950e-1341.56Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A1I7SWV0_BURXY5.560e-1346.15Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A8J4Y5W3_CHIOP7.620e-1340.26Dolichyl-diphosphooligosaccharide--protein glycosy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig93contigH-akashiwo_Contig93:1076072..1076467 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog10042.XP_006980951.1
Preferred nameDDOST
PFAMsDDOST_48kD
Model size256
Max annot lvl33208|Metazoa
KEGG koko:K12670
KEGG Pathwayko00510,ko00513,ko01100,ko04141,map00510,map00513,map01100,map04141
KEGG ModuleM00072
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005766,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005886,GO:0006464,GO:0006486,GO:0006487,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0006996,GO:0007030,GO:0008150,GO:0008152,GO:0008250,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0010033,GO:0010256,GO:0012505,GO:0012506,GO:0016020,GO:0016043,GO:0016192,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0030141,GO:0030659,GO:0030667,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032940,GO:0032991,GO:0034097,GO:0034389,GO:0034645,GO:0035577,GO:0036211,GO:0036230,GO:0042110,GO:0042119,GO:0042175,GO:0042221,GO:0042582,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043299,GO:0043312,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046649,GO:0046903,GO:0050896,GO:0051179,GO:0051234,GO:0070085,GO:0071704,GO:0071840,GO:0071944,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098827,GO:0098852,GO:0099503,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990234
Exons2
Evalue8.06e-16
EggNOG OGsKOG2754@1|root,KOG2754@2759|Eukaryota,38ERA@33154|Opisthokonta,3BD6H@33208|Metazoa,3CRRP@33213|Bilateria,481JI@7711|Chordata,4977N@7742|Vertebrata,3JA8Z@40674|Mammalia,35J05@314146|Euarchontoglires,4Q1CB@9989|Rodentia
Descriptionoligosaccharyl transferase activity
Cds size255
COG categoryO
BRITEko00000,ko00001,ko00002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388047.6893775-CDS-H-akashiwo_Contig93:1076071..10762321681388047.6893775-CDS-H-akashiwo_Contig93:1076071..1076232Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig93 1076072..1076232 -
1681388047.7100365-CDS-H-akashiwo_Contig93:1076373..10764671681388047.7100365-CDS-H-akashiwo_Contig93:1076373..1076467Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig93 1076374..1076467 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig93.33.1prot_H-akashiwo_Contig93.33.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig93 1076072..1076467 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig93.33.1

>prot_H-akashiwo_Contig93.33.1 ID=prot_H-akashiwo_Contig93.33.1|Name=mRNA_H-akashiwo_Contig93.33.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=85bp
MEGRVGGKRTLVMVDAMKTEDTHSMFLETLKDRGHQITVATAESNDLRLI
AFGAPLYDNIILLCPEWEEGGSVKVDDVMGLVEGG
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mRNA from alignment at H-akashiwo_Contig93:1076072..1076467-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig93.33.1 ID=mRNA_H-akashiwo_Contig93.33.1|Name=mRNA_H-akashiwo_Contig93.33.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=396bp|location=Sequence derived from alignment at H-akashiwo_Contig93:1076072..1076467- (Heterosigma akashiwo CCMP452)
ATGGAGGGGCGTGTCGGTGGAAAGCGCACATTGGTCATGGTAGATGCTAT GAAAACCGAAGATACCCACTCAATGTTTTTAGAGACTCTGAAAGGTAATT TATCCACCAGCGAAGGTTTCAAACGCATCTTTGTTTCGCCGCCATGTTAT CTCCATCTGCGAACCGCTTTGCAAAACACAATGCCCTTATCCTCTCTCCT TTTTTTTTCTTACTCTCTGCTCTTTCCCAACTCAGATCGGGGACATCAGA TAACTGTTGCCACTGCAGAATCGAATGACTTGAGATTGATCGCCTTTGGG GCACCTCTTTACGACAACATCATTTTGCTCTGTCCCGAATGGGAGGAGGG TGGCTCTGTCAAGGTTGATGATGTCATGGGGCTGGTGGAGGGGGGA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig93:1076072..1076467-

>mRNA_H-akashiwo_Contig93.33.1 ID=mRNA_H-akashiwo_Contig93.33.1|Name=mRNA_H-akashiwo_Contig93.33.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=255bp|location=Sequence derived from alignment at H-akashiwo_Contig93:1076072..1076467- (Heterosigma akashiwo CCMP452)
ATGGAGGGGCGTGTCGGTGGAAAGCGCACATTGGTCATGGTAGATGCTAT
GAAAACCGAAGATACCCACTCAATGTTTTTAGAGACTCTGAAAGATCGGG
GACATCAGATAACTGTTGCCACTGCAGAATCGAATGACTTGAGATTGATC
GCCTTTGGGGCACCTCTTTACGACAACATCATTTTGCTCTGTCCCGAATG
GGAGGAGGGTGGCTCTGTCAAGGTTGATGATGTCATGGGGCTGGTGGAGG
GGGGA
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