mRNA_H-akashiwo_Contig93.27.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig93.27.1 vs. uniprot
Match: A0A7S3Y4U9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4U9_HETAK) HSP 1 Score: 238 bits (607), Expect = 3.390e-79 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1 Query: 10 VKAGLLQLPRAADVRPQAWNVVLGDGLHNCLDGMVIAVAFAGCGSSMGWTILGAVMSHEIPQEIADFFVLLDSGLSFGQALCFNLFSGLCAVAGGIIVLSTPSLTAEGIGYMLLFGS 360 VKAGLLQLPRAADVRPQAWNVVLGDGLHNCLDGMVIAVAFAGCGSSMGWTILGAVMSHEIPQEIADFFVLLDSGLSFGQALCFNLFSGLCAVAGGIIVLSTPSLTAEGIGYMLLFGS Sbjct: 5 VKAGLLQLPRAADVRPQAWNVVLGDGLHNCLDGMVIAVAFAGCGSSMGWTILGAVMSHEIPQEIADFFVLLDSGLSFGQALCFNLFSGLCAVAGGIIVLSTPSLTAEGIGYMLLFGS 121
BLAST of mRNA_H-akashiwo_Contig93.27.1 vs. uniprot
Match: A0A7S4DBT4_HETAK (Hypothetical protein n=8 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBT4_HETAK) HSP 1 Score: 191 bits (484), Expect = 1.210e-55 Identity = 92/106 (86.79%), Postives = 97/106 (91.51%), Query Frame = 1 Query: 43 ADVRPQAWNVVLGDGLHNCLDGMVIAVAFAGCGSSMGWTILGAVMSHEIPQEIADFFVLLDSGLSFGQALCFNLFSGLCAVAGGIIVLSTPSLTAEGIGYMLLFGS 360 A+VRPQAWNVV+GD LHNCLDGMVIAVAFAGCG+SMGWTILGAVM+HEIPQEIADFFVLLDSGLSF QAL NLFSG CAV GGIIVL+ P L AEGIGYMLLFGS Sbjct: 374 AEVRPQAWNVVVGDALHNCLDGMVIAVAFAGCGNSMGWTILGAVMAHEIPQEIADFFVLLDSGLSFVQALLLNLFSGFCAVLGGIIVLTAPGLDAEGIGYMLLFGS 479
BLAST of mRNA_H-akashiwo_Contig93.27.1 vs. uniprot
Match: A0A6V1U7C3_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U7C3_HETAK) HSP 1 Score: 164 bits (415), Expect = 1.170e-45 Identity = 86/117 (73.50%), Postives = 94/117 (80.34%), Query Frame = 1 Query: 22 LLQLPRAADVR---PQAWNVVLGDGLHNCLDGMVIAVAFAGCGSSMGWTILGAVMSHEIPQEIADFFVLLDSGLSFGQALCFNLFSGLCAVAGGIIVLS-TPSLTAEGIGYMLLFGS 360 L LPR VR PQAWN+VLGD + N LDGMVIAVAFAGC SSMGW + GAVMSHEIPQEI DFFVL+DSGLSFGQAL NLFSG+CA+ GGIIVL SLTA+ +GYMLLFGS Sbjct: 376 LAALPRVGPVRGVRPQAWNLVLGDCICNGLDGMVIAVAFAGCDSSMGWIVFGAVMSHEIPQEIGDFFVLIDSGLSFGQALLANLFSGVCAIFGGIIVLLLNSSLTADVVGYMLLFGS 492
BLAST of mRNA_H-akashiwo_Contig93.27.1 vs. uniprot
Match: A0A2R5GVZ1_9STRA (Zinc transporter ZIP12 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVZ1_9STRA) HSP 1 Score: 101 bits (251), Expect = 1.510e-22 Identity = 49/104 (47.12%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 55 PQAWNVVLGDGLHNCLDGMVIAVAFAGCGSS-MGWTILGAVMSHEIPQEIADFFVLLDSGLSFGQALCFNLFSGLCAVAGGIIVLS-TPSLTAEGIGYMLLFGS 360 P +N+++GDG+HN +DGM+IA+ FA C +S +GW L +V+ HEIPQE+ DF +L+ +GLSF AL FN S L V G IIVL+ S+ Y+L++G+ Sbjct: 422 PLVYNIIIGDGIHNLVDGMLIAIGFAACPTSAIGWITLASVVMHEIPQELVDFVILVRAGLSFKAALFFNFCSQLTCVVGAIIVLALNASIDETAQAYVLVYGA 525
BLAST of mRNA_H-akashiwo_Contig93.27.1 vs. uniprot
Match: A0A2R5GRU2_9STRA (Zinc transporter ZIP12 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRU2_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.870e-22 Identity = 48/104 (46.15%), Postives = 72/104 (69.23%), Query Frame = 1 Query: 55 PQAWNVVLGDGLHNCLDGMVIAVAFAGC-GSSMGWTILGAVMSHEIPQEIADFFVLLDSGLSFGQALCFNLFSGLCAVAGGIIVLSTPSLTAEGI-GYMLLFGS 360 P N+V+GDG+HN +DGM+IA+ FA C GS++GW LG+V++HE+PQE+ DF VL+ +GLSF AL FN S + + G + VL+ + E Y+L++G+ Sbjct: 295 PLISNIVIGDGIHNLVDGMLIAIGFAACPGSAIGWITLGSVLAHELPQEMVDFVVLVRAGLSFKAALFFNFCSQMTCLIGAVAVLAVNATINESAQAYVLVYGA 398
BLAST of mRNA_H-akashiwo_Contig93.27.1 vs. uniprot
Match: A0A5D6Y9S6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y9S6_9STRA) HSP 1 Score: 100 bits (249), Expect = 2.560e-22 Identity = 46/104 (44.23%), Postives = 70/104 (67.31%), Query Frame = 1 Query: 49 VRPQAWNVVLGDGLHNCLDGMVIAVAFAGCGSSMGWTILGAVMSHEIPQEIADFFVLLDSGLSFGQALCFNLFSGLCAVAGGIIVLSTPSLTAEGIGYMLLFGS 360 ++P A+ ++LGD HN +DG++IA AF C S+G ++ + + HEIPQE+ADF VL+DSG + QA+ FN S L + AG I+LS ++T +G +L FG+ Sbjct: 428 IKPMAYIILLGDLFHNFVDGVLIATAFLACDDSLGLAVMASAILHEIPQELADFIVLVDSGFTKFQAIVFNFISALSSFAGAFIILSAVTVTNSTMGLLLGFGA 531
BLAST of mRNA_H-akashiwo_Contig93.27.1 vs. uniprot
Match: A0A2R5GPE0_9STRA (Zinc transporter ZIP12 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GPE0_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 3.140e-21 Identity = 49/104 (47.12%), Postives = 69/104 (66.35%), Query Frame = 1 Query: 55 PQAWNVVLGDGLHNCLDGMVIAVAFAGCG-SSMGWTILGAVMSHEIPQEIADFFVLLDSGLSFGQALCFNLFSGLCAVAGGIIVLS-TPSLTAEGIGYMLLFGS 360 P NVV+GDG+ N DG++I AFA C S++GW L A++ HEIPQE+ DF VLL +GLS A+ +N S L AV G +I L+ + ++ EG G +LL+G+ Sbjct: 285 PLIANVVIGDGMCNLTDGLIIGTAFAFCSESNLGWITLAAILLHEIPQEVVDFVVLLSAGLSIKMAIFYNFLSSLLAVLGVVIALALSGEISVEGQGLVLLYGA 388
BLAST of mRNA_H-akashiwo_Contig93.27.1 vs. uniprot
Match: A0A0P1AM43_PLAHL (Serine threonine protein phosphatase 2a n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AM43_PLAHL) HSP 1 Score: 97.4 bits (241), Expect = 3.730e-21 Identity = 45/104 (43.27%), Postives = 68/104 (65.38%), Query Frame = 1 Query: 49 VRPQAWNVVLGDGLHNCLDGMVIAVAFAGCGSSMGWTILGAVMSHEIPQEIADFFVLLDSGLSFGQALCFNLFSGLCAVAGGIIVLSTPSLTAEGIGYMLLFGS 360 ++P A+ ++LGD HN +DG++IA AF C S+G ++ + + HE+PQE ADF +L+DSG + QA+ FN S L A G I+VL+ +T E +G +L GS Sbjct: 338 IKPMAYIILLGDLFHNFVDGVLIATAFLACDDSLGISVTASAVLHELPQEFADFIILVDSGFTPFQAVLFNFLSALSAFVGAIVVLAAVPVTNETMGLLLAVGS 441
BLAST of mRNA_H-akashiwo_Contig93.27.1 vs. uniprot
Match: A0A5D6YCB8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCB8_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 8.290e-21 Identity = 41/104 (39.42%), Postives = 64/104 (61.54%), Query Frame = 1 Query: 49 VRPQAWNVVLGDGLHNCLDGMVIAVAFAGCGSSMGWTILGAVMSHEIPQEIADFFVLLDSGLSFGQALCFNLFSGLCAVAGGIIVLSTPSLTAEGIGYMLLFGS 360 V P AW +GD H DG+V+AVAF C SS+GW + V+ HE+P + DFF+ + +G+ QAL N + L ++ G +I+L+ S++ +GY++ FGS Sbjct: 375 VEPVAWITAVGDFFHAFTDGVVLAVAFKSCSSSLGWAVALGVVLHEVPHRVGDFFIYIKAGMVIPQALVLNFIASLASLLGAVILLAAGSVSNHALGYLMGFGS 478
BLAST of mRNA_H-akashiwo_Contig93.27.1 vs. uniprot
Match: A0A2D4CIT5_PYTIN (Ev486 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIT5_PYTIN) HSP 1 Score: 95.9 bits (237), Expect = 1.280e-20 Identity = 40/104 (38.46%), Postives = 66/104 (63.46%), Query Frame = 1 Query: 49 VRPQAWNVVLGDGLHNCLDGMVIAVAFAGCGSSMGWTILGAVMSHEIPQEIADFFVLLDSGLSFGQALCFNLFSGLCAVAGGIIVLSTPSLTAEGIGYMLLFGS 360 V+P AW +GD +H DG+V+AVAF C SS+GW ++ ++ HE+P + DFF+ L +G+ QAL N + L + G +I+L+ S++ +G++L FG+ Sbjct: 660 VQPLAWITAIGDVVHAFTDGVVLAVAFKSCSSSLGWAVMLGIVLHEVPHRVGDFFIFLKAGMMVSQALFVNFIASLASFVGVLILLAAGSVSDHTLGFLLAFGT 763 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig93.27.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig93.27.1 >prot_H-akashiwo_Contig93.27.1 ID=prot_H-akashiwo_Contig93.27.1|Name=mRNA_H-akashiwo_Contig93.27.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=120bp ARRVKAGLLQLPRAADVRPQAWNVVLGDGLHNCLDGMVIAVAFAGCGSSMback to top mRNA from alignment at H-akashiwo_Contig93:927676..928545- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig93.27.1 ID=mRNA_H-akashiwo_Contig93.27.1|Name=mRNA_H-akashiwo_Contig93.27.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=870bp|location=Sequence derived from alignment at H-akashiwo_Contig93:927676..928545- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig93:927676..928545- >mRNA_H-akashiwo_Contig93.27.1 ID=mRNA_H-akashiwo_Contig93.27.1|Name=mRNA_H-akashiwo_Contig93.27.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=360bp|location=Sequence derived from alignment at H-akashiwo_Contig93:927676..928545- (Heterosigma akashiwo CCMP452)back to top |