mRNA_H-akashiwo_Contig911.6.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig911.6.1 vs. uniprot
Match: A0A7S3XU57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU57_HETAK) HSP 1 Score: 342 bits (876), Expect = 1.000e-115 Identity = 165/221 (74.66%), Postives = 188/221 (85.07%), Query Frame = 1 Query: 1 MCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSATE 663 MCFGLTNAPATFSHLVNKVFQG +DFALCFLDDVL ++G +FS HL LE+IF RMI ANLKFKLPKCLFGA+QVP+LGHI TREG+KPDPKKIEA+K ++RP +KKQVRQ LGLASYYRQFV F+ A PLY LTK PKGVEWTDDCEW++Q LKD L + PILI+P F++ F +ETDAS GLGA+LSQ+T GRKPVAYASRVC+S EANYSATE Sbjct: 81 MCFGLTNAPATFSHLVNKVFQGCQHDFALCFLDDVLCYTGPDFSLHLRQLEEIFIRMIKANLKFKLPKCLFGAAQVPFLGHIATREGLKPDPKKIEAIKKLQRPQTKKQVRQVLGLASYYRQFVPNFAATAAPLYTLTKKEPKGVEWTDDCEWAFQNLKDTLTTAPILIFPNFNKEFTIETDASKHGLGAILSQDTTEGRKPVAYASRVCNSAEANYSATE 301
BLAST of mRNA_H-akashiwo_Contig911.6.1 vs. uniprot
Match: A0A7S3XVA0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA0_HETAK) HSP 1 Score: 338 bits (867), Expect = 6.820e-112 Identity = 160/221 (72.40%), Postives = 189/221 (85.52%), Query Frame = 1 Query: 1 MCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSATE 663 MCFGLTNAPATFSHLVNKVFQG +FALCFLDDVL +S + F+ HL +L +IFKRM AANLKFKLPKC+FGA+Q+P+LGH+ +REG+KPDPKKIEAV+ +RRP SKKQVRQ LGLASYYRQFV F+ IA PLY+LTKD PKGV W DDCEW++Q +KD L S P+L+YPR+D+PFIVETDAS GLGA+L Q+T G +P+AYASR+CS TEANYSATE Sbjct: 219 MCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLTKDKPKGVLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYASRLCSPTEANYSATE 439
BLAST of mRNA_H-akashiwo_Contig911.6.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK) HSP 1 Score: 338 bits (867), Expect = 1.290e-109 Identity = 160/221 (72.40%), Postives = 189/221 (85.52%), Query Frame = 1 Query: 1 MCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSATE 663 MCFGLTNAPATFSHLVNKVFQG +FALCFLDDVL +S + F+ HL +L +IFKRM AANLKFKLPKC+FGA+Q+P+LGH+ +REG+KPDPKKIEAV+ +RRP SKKQVRQ LGLASYYRQFV F+ IA PLY+LTKD PKGV W DDCEW++Q +KD L S P+L+YPR+D+PFIVETDAS GLGA+L Q+T G +P+AYASR+CS TEANYSATE Sbjct: 219 MCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLTKDKPKGVLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYASRLCSPTEANYSATE 439
BLAST of mRNA_H-akashiwo_Contig911.6.1 vs. uniprot
Match: A0A4Y2GC61_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 n=4 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2GC61_ARAVE) HSP 1 Score: 199 bits (507), Expect = 8.860e-61 Identity = 104/220 (47.27%), Postives = 143/220 (65.00%), Query Frame = 1 Query: 1 MCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSAT 660 M FGL NAPATF L+ V +G ++ L +LDD++ G+ F +L NL K+F+R+ ANLK KC F V +LGH+I+ EG+K DP KI+AV RP + VR FLGL +YYR+FV+ FS IA+PL++LT + WT++CE S+ +LK L S+PIL YPR D+ FI++TDAS +G+GAVLSQ T + + +AY S+ E NY T Sbjct: 1 MPFGLCNAPATFERLIETVLRGLTSEACLVYLDDIII-VGRTFEENLNNLRKVFQRLQKANLKLSPKKCRFFQKVVTYLGHVISAEGVKTDPGKIKAVVDWPRPETVHDVRSFLGLCTYYRRFVKNFSTIARPLHKLT-EAKSNFNWTEECEKSFNSLKQALTSSPILTYPRTDKDFILDTDASNEGIGAVLSQNTGNEERVIAYFSKSLGKPERNYCVT 218
BLAST of mRNA_H-akashiwo_Contig911.6.1 vs. uniprot
Match: A0A4Y2FM20_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2FM20_ARAVE) HSP 1 Score: 199 bits (505), Expect = 1.720e-60 Identity = 106/220 (48.18%), Postives = 141/220 (64.09%), Query Frame = 1 Query: 1 MCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSAT 660 M FGL NAPATF L V G ++D L +LDD++ G+ F HL NL K+F+R+ ANLK KC F +V +LGHII+ EG+K DP+KI+AV R +R+FLGL +YYR+FV+ FS IA+ L++LT+D WTD CE S+ +LK L S+PIL YPR D+ FI++TDAS +G+GAVLSQ T + +AY S+ E NY T Sbjct: 1 MPFGLCNAPATFERLTETVLSGLSSDTCLVYLDDIII-VGRTFEEHLNNLRKVFQRLQKANLKLNRKKCRFFQREVAYLGHIISEEGVKTDPEKIKAVVNWSRSDKIHDLRKFLGLCTYYRRFVKTFSAIARNLHKLTEDK-SNFNWTDKCEKSFYSLKQALTSSPILTYPRTDKDFILDTDASNEGMGAVLSQNTGKEERVIAYFSKSLGKPERNYCVT 218
BLAST of mRNA_H-akashiwo_Contig911.6.1 vs. uniprot
Match: A0A4Y2I107_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2I107_ARAVE) HSP 1 Score: 205 bits (521), Expect = 5.490e-59 Identity = 105/220 (47.73%), Postives = 145/220 (65.91%), Query Frame = 1 Query: 1 MCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSAT 660 M FGL NAP TF L+ V +G +++ L +LDD++ G+ F HL NL K+F+R+ ANLK L KC F +V +LGH+I+ EG+K DP+KI+AV RP + +R FLGL +YYR+FV+ FS IAKPLY+LT + WT++CE S+ +LK L S+PIL YPR D+ FI++TDAS +G+GAVLSQ + + +AY S+ E NY T Sbjct: 223 MPFGLCNAPETFERLMETVLRGLSSEACLVYLDDIII-VGRTFEEHLNNLRKVFQRLQKANLKLNLKKCRFFQKEVTYLGHVISAEGVKTDPEKIKAVVDWPRPETVHDLRSFLGLCTYYRRFVKNFSTIAKPLYKLT-EAKSNFNWTEECEKSFNSLKQALTSSPILTYPRTDKDFILDTDASNEGIGAVLSQNIGNEERVIAYFSKSLGKPERNYCVT 440
BLAST of mRNA_H-akashiwo_Contig911.6.1 vs. uniprot
Match: A0A4Y2LUR4_ARAVE (RNA-directed DNA polymerase (Fragment) n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2LUR4_ARAVE) HSP 1 Score: 205 bits (521), Expect = 6.380e-59 Identity = 105/220 (47.73%), Postives = 146/220 (66.36%), Query Frame = 1 Query: 1 MCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSAT 660 M FGL NAPATF L+ V +G +++ L +LDD++ G+ F HL NL K+F+R+ ANLK L KC F +V +LGH+I+ EG+K DP+KI+AV RP + +R FLGL +YYR+FV+ FS IAKPL++LT + WT++CE S+ +LK L S+PIL YPR D+ FI++TDAS +G+GAVLSQ + + +AY S+ E NY T Sbjct: 89 MPFGLCNAPATFERLMETVLRGLSSEACLVYLDDIII-VGRTFEEHLNNLRKVFQRLQKANLKLNLKKCRFFQKEVTYLGHVISAEGVKTDPEKIKAVVDWPRPETVHDLRSFLGLCTYYRRFVKNFSTIAKPLHKLT-EAKSNFNWTEECEKSFNSLKQALTSSPILTYPRTDKDFILDTDASNEGIGAVLSQNIGNEERVIAYFSKSLGKPERNYCVT 306
BLAST of mRNA_H-akashiwo_Contig911.6.1 vs. uniprot
Match: A0A4Y2TZG3_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 (Fragment) n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2TZG3_ARAVE) HSP 1 Score: 197 bits (501), Expect = 7.330e-59 Identity = 103/220 (46.82%), Postives = 145/220 (65.91%), Query Frame = 1 Query: 1 MCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSAT 660 M FGL NAPATF L+ V +G +++ L +LDD++ G+ F HL NL K+F+R+ ANLK L KC F +V +LGH+I+ G+K DP+KI+AV RP + +R FLGL +YYR+FV+ FS IA+PL++LT + WT++CE S+ +LK L S+PIL YPR D+ FI++TDAS +G+GAVLSQ + + +AY S+ E NY T Sbjct: 65 MPFGLCNAPATFERLMETVLRGLSSEACLVYLDDIII-VGRTFEEHLNNLRKVFQRLQKANLKLNLKKCRFFQKEVTYLGHVISA-GVKTDPEKIKAVVDWPRPETVHDLRSFLGLCTYYRRFVKNFSTIARPLHKLT-EAKSNFNWTEECEKSFNSLKQALTSSPILTYPRTDKDFILDTDASNEGIGAVLSQNIGNEERVIAYFSKSLGKPERNYCVT 281
BLAST of mRNA_H-akashiwo_Contig911.6.1 vs. uniprot
Match: A0A4Y2QNW9_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2QNW9_ARAVE) HSP 1 Score: 205 bits (521), Expect = 1.260e-58 Identity = 105/220 (47.73%), Postives = 146/220 (66.36%), Query Frame = 1 Query: 1 MCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSAT 660 M FGL NAPATF L+ V +G +++ L +LDD++ G+ F HL NL K+F+R+ ANLK L KC F +V +LGH+I+ EG+K DP+KI+AV RP + +R FLGL +YYR+FV+ FS IAKPL++LT + WT++CE S+ +LK L S+PIL YPR D+ FI++TDAS +G+GAVLSQ + + +AY S+ E NY T Sbjct: 387 MPFGLCNAPATFERLMETVLRGLSSEACLVYLDDIII-VGRTFEEHLNNLRKVFQRLQKANLKLNLKKCRFFQKEVTYLGHVISAEGVKTDPEKIKAVVDWPRPETVHDLRSFLGLCTYYRRFVKNFSTIAKPLHKLT-EAKSNFNWTEECEKSFNSLKQALTSSPILTYPRTDKDFILDTDASNEGIGAVLSQNIGNEERVIAYFSKSLGKPERNYCVT 604
BLAST of mRNA_H-akashiwo_Contig911.6.1 vs. uniprot
Match: A0A4Y2GE17_ARAVE (RNA-directed DNA polymerase (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2GE17_ARAVE) HSP 1 Score: 204 bits (520), Expect = 1.540e-58 Identity = 106/220 (48.18%), Postives = 145/220 (65.91%), Query Frame = 1 Query: 1 MCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSAT 660 M FGL NAPATF L+ V +G +++ L +LDD++ G+ F HL NL K+F+R+ ANLK KC F +V +LGH+I+ EG+K DP KI+AV RP +R FLGL +YYR+FV+ FS IA+PL++LT +T WTD+CE S+ +LK L S+PIL YPR D+ FI++TDAS +G+GAVLSQ T + + +AY S+ E NY T Sbjct: 218 MPFGLCNAPATFERLMETVLRGLSSEACLVYLDDIII-VGRTFEEHLNNLRKVFQRLQKANLKLSPKKCRFFQKEVTYLGHVISAEGVKTDPGKIKAVVDWPRPDKIHDLRSFLGLCTYYRRFVKNFSTIARPLHKLT-ETKSNFNWTDECEKSFNSLKQALTSSPILTYPRTDKEFILDTDASNEGIGAVLSQNTGNEERVIAYFSKSLGKPEKNYCVT 435 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig911.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig911.6.1 >prot_H-akashiwo_Contig911.6.1 ID=prot_H-akashiwo_Contig911.6.1|Name=mRNA_H-akashiwo_Contig911.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=221bp MCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLback to top mRNA from alignment at H-akashiwo_Contig911:189067..189729- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig911.6.1 ID=mRNA_H-akashiwo_Contig911.6.1|Name=mRNA_H-akashiwo_Contig911.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=663bp|location=Sequence derived from alignment at H-akashiwo_Contig911:189067..189729- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig911:189067..189729- >mRNA_H-akashiwo_Contig911.6.1 ID=mRNA_H-akashiwo_Contig911.6.1|Name=mRNA_H-akashiwo_Contig911.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=663bp|location=Sequence derived from alignment at H-akashiwo_Contig911:189067..189729- (Heterosigma akashiwo CCMP452)back to top |