mRNA_H-akashiwo_Contig911.1.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig911.1.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 415 bits (1066), Expect = 4.160e-144 Identity = 196/223 (87.89%), Postives = 212/223 (95.07%), Query Frame = 1 Query: 1 FYLSQTSFIKDALVKFGLNYLPACKTPIDHTVDLTPTPGFKAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQHDPEPKHFEAVQRAFRYLKGTQSESLHLGGDLVLCAYSDSDFCADRIDGKSVTGYVLFLGDAPIVWSSKLQGAVTTSTVEAEYLDLRSSVKDIMWLRYLLADLGCPQQDPTPVVEDNSACIEWANDKVINKKNRHFHVSYHLAK 669 F+LSQTSFIKDAL KFGL+YLPACKTP+DHTVDLTPTPGFKA+LSDANLYRSMVGTLAWVANWTRPELAF VHKLQRTQ +PEPKHFEAVQRAFRYLKGTQSESL LGGDLVL A+SDSDFC DR+DGKSVTGY+LFLGDAPIVWSSKLQGAVTTSTVEAEYL LRS+VKDIMWLR LL ++GCPQ +PTPVVEDNSAC+EWAND ++NK+NRHFHVSYHLAK Sbjct: 86 FHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAK 308
BLAST of mRNA_H-akashiwo_Contig911.1.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK) HSP 1 Score: 189 bits (479), Expect = 2.750e-56 Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 1 Query: 1 FYLSQTSFIKDALVKFGLNYLPACKTPIDHTVDLTPTPGFKAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQHDPEPKHFEAVQRAFRYL 291 F+LSQTSFIKDAL KFGL+YLPACKTPIDHTVDLTPTPGFKA+LSDANLYRSMVGTLAWVANWTRPELAF VHKLQRTQ +PEPKHFEAVQRAFRYL Sbjct: 172 FHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268
BLAST of mRNA_H-akashiwo_Contig911.1.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 196 bits (499), Expect = 2.500e-54 Identity = 97/223 (43.50%), Postives = 141/223 (63.23%), Query Frame = 1 Query: 7 LSQTSFIKDALVKFGLNYLPACKTPIDHTVDLTPTPGFKAKLS--DANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQHDPEPKHFEAVQRAFRYLKGTQSESLHLGGDLVLCAYSDSDFCADRIDGKSVTGYVLFLGDAPIVWSSKLQGAVTTSTVEAEYLDLRSSVKDIMWLRYLLADLGCPQQDPTPVVEDNSACIEWANDKVINKKNRHFHVSYHLAK 669 LSQ SFI++A KF + P++ +D+ +LS +A +RS+VGT+ W+A WT PE+A+++H L + P A RYL T+ + + LGG L L AY+D+DFC++R G+S +G+ +FLG +PI+WSS++Q VT +T EAEY+ LR++V D+MWL+ LL LG +Q P+ EDN ACI WAND+ ++K RH HVSYH K Sbjct: 733 LSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGY-KQGCVPIYEDNKACITWANDETVSKSARHIHVSYHYTK 954
BLAST of mRNA_H-akashiwo_Contig911.1.1 vs. uniprot
Match: UPI0012F52066 (uncharacterized protein LOC116404492 n=1 Tax=Cucumis sativus TaxID=3659 RepID=UPI0012F52066) HSP 1 Score: 163 bits (413), Expect = 6.930e-46 Identity = 87/223 (39.01%), Postives = 128/223 (57.40%), Query Frame = 1 Query: 7 LSQTSFIKDALVKFGLNYLPACKTPIDHTVDLTPTPGFKAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQHDPEPKHFEAVQRAFRYLKGTQSESLHLGGD--LVLCAYSDSDFCADRIDGKSVTGYVLFLGDAPIVWSSKLQGAVTTSTVEAEYLDLRSSVKDIMWLRYLLADLGCPQQDPTPVVEDNSACIEWANDKVINKKNRHFHVSYHLAK 669 LSQ + D + + G+ TP+D V LTP G L DA+LYR +VG+L ++ TRP++A+AVH + + P HF AV R RY+KGT L LVL YSD+D+ D D +S TGY +LGD+ I W SK Q ++ S+ E+EY L + +++WLR+LLAD+G PQQ PT + DN + I+ A++ V +++ +H H + Sbjct: 74 LSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDG--VPLDDASLYRQLVGSLIYLTV-TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVR 293
BLAST of mRNA_H-akashiwo_Contig911.1.1 vs. uniprot
Match: UPI001E6976E5 (uncharacterized mitochondrial protein AtMg00810-like n=2 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E6976E5) HSP 1 Score: 161 bits (407), Expect = 3.330e-45 Identity = 86/223 (38.57%), Postives = 135/223 (60.54%), Query Frame = 1 Query: 7 LSQTSFIKDALVKFGLNYLPACKTPIDHTVDLTPTPGFKAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQHDPEPKHFEAVQRAFRYLKGTQSESLHL--GGDLVLCAYSDSDFCADRIDGKSVTGYVLFLGDAPIVWSSKLQGAVTTSTVEAEYLDLRSSVKDIMWLRYLLADLGCPQQDPTPVVEDNSACIEWANDKVINKKNRHFHVSYHLAK 669 LSQ+ +I + L + L+ A +P++ V P+ G L+D LYR++VG+L ++ TRP++A+AVH + + P H+ AV R RYL+GTQ +SL L LCAYSD+D+ D ID KS TG+ +FLG++ I W SK Q V+ S+ EAEY + S+ +I+WL +LL+D+G PTP+ DN + I+ A++ V +++ +H + H + Sbjct: 24 LSQSKYIANILEQARLSDNRAIDSPLELNVKYAPSDG--VPLADPTLYRTLVGSLVYLTI-TRPDIAYAVHVVSQFVVSPTTVHWAAVLRILRYLRGTQFQSLLFPSSSSLELCAYSDADWAGDPIDRKSTTGFCIFLGESLISWKSKKQDIVSRSSTEAEYRAMASTTTEIVWLHWLLSDMGISLSQPTPMYCDNKSAIQIAHNSVFHERTKHIEIDCHFTR 243
BLAST of mRNA_H-akashiwo_Contig911.1.1 vs. uniprot
Match: UPI001E695AE6 (uncharacterized mitochondrial protein AtMg00810-like n=3 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E695AE6) HSP 1 Score: 163 bits (413), Expect = 4.180e-45 Identity = 87/223 (39.01%), Postives = 136/223 (60.99%), Query Frame = 1 Query: 7 LSQTSFIKDALVKFGLNYLPACKTPIDHTVDLTPTPGFKAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQHDPEPKHFEAVQRAFRYLKGTQSESLHL--GGDLVLCAYSDSDFCADRIDGKSVTGYVLFLGDAPIVWSSKLQGAVTTSTVEAEYLDLRSSVKDIMWLRYLLADLGCPQQDPTPVVEDNSACIEWANDKVINKKNRHFHVSYHLAK 669 LSQ+ +I + L + L+ A +P++ V P+ G L+D LYR++VG+L ++ TRP++A+AVH + + P H+ AV R RYL+GTQ +SL L LCAYSD+D+ D ID KS TG+ +FLG++ I W SK Q V+ S+ EAEY + S+ +I+WLR+LL+D+G PTP+ DN + I+ A++ V +++ +H + H + Sbjct: 118 LSQSKYISNILEQARLSDNRAIDSPLELNVKYAPSDG--VPLADPTLYRTLVGSLVYLTI-TRPDIAYAVHVVSQFVVSPTTVHWAAVLRILRYLRGTQFQSLLFPSSSSLELCAYSDADWAGDPIDRKSTTGFCIFLGESLISWKSKKQDIVSRSSTEAEYRAMASTTTEIVWLRWLLSDMGISLSQPTPMYCDNKSAIQIAHNSVFHERTKHIEIDCHFTR 337
BLAST of mRNA_H-akashiwo_Contig911.1.1 vs. uniprot
Match: A0A2N9HMY8_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HMY8_FAGSY) HSP 1 Score: 166 bits (420), Expect = 2.370e-44 Identity = 90/225 (40.00%), Postives = 126/225 (56.00%), Query Frame = 1 Query: 1 FYLSQTSFIKDALVKFGLNYLPACKTPIDHTVDLTPTPGFKAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQHDPEPKHFEAVQRAFRYLKGTQSESLHLGGD--LVLCAYSDSDFCADRIDGKSVTGYVLFLGDAPIVWSSKLQGAVTTSTVEAEYLDLRSSVKDIMWLRYLLADLGCPQQDPTPVVEDNSACIEWANDKVINKKNRHFHVSYHLAK 669 +YLSQ + D L K GL TP++ V L T G LSDA LYR +VG+L ++ TRP+LA+AVH + + P H+ AV R RY+KGT LH L L AY+D+D+ D D +S TGY LG + I W SK Q V S+ EAEY L + +++WLR+LLAD+G PQ TP+ DN + I A++ V +++ +H + H + Sbjct: 371 YYLSQAKYASDLLSKAGLTDSKTVSTPLELNVKLNTTDG--EPLSDATLYRQLVGSLIYLTV-TRPDLAYAVHLVSQFMSAPRSTHYAAVLRILRYIKGTLFHGLHFSAQSSLELRAYADADWAGDPTDRRSTTGYCFLLGSSLISWRSKKQSVVARSSTEAEYRALADATSELLWLRWLLADMGAPQTTSTPIHCDNRSAIHIAHNDVFHERTKHIEIDCHFIR 592
BLAST of mRNA_H-akashiwo_Contig911.1.1 vs. uniprot
Match: A0A2N9HCU5_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HCU5_FAGSY) HSP 1 Score: 167 bits (422), Expect = 6.910e-44 Identity = 90/225 (40.00%), Postives = 126/225 (56.00%), Query Frame = 1 Query: 1 FYLSQTSFIKDALVKFGLNYLPACKTPIDHTVDLTPTPGFKAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQHDPEPKHFEAVQRAFRYLKGTQSESLHLGGD--LVLCAYSDSDFCADRIDGKSVTGYVLFLGDAPIVWSSKLQGAVTTSTVEAEYLDLRSSVKDIMWLRYLLADLGCPQQDPTPVVEDNSACIEWANDKVINKKNRHFHVSYHLAK 669 +YLSQ + D L K GL TP++ V L PT G LSDA LYR +VG+L ++ TRP+LA+AVH + + P H+ AV R RY+KGT LH L L AY+D+D+ D ID +S TGY LG + I W SK Q V S+ EAEY L + +++WLR+LL D+G PQ TP+ DN + I ++ V +++ +H + H + Sbjct: 773 YYLSQAKYASDLLSKAGLTDSKTVFTPLELNVKLNPTDG--EPLSDATLYRQLVGSLIYLTV-TRPDLAYAVHLVSQFMSAPRSTHYAAVLRILRYIKGTLFHGLHFSAQSSLELRAYADADWAGDPIDRRSTTGYCFLLGSSLISWRSKKQSVVARSSTEAEYRALADATSELLWLRWLLTDMGAPQTTSTPIHCDNRSAIHITHNDVFHERTKHIEIDCHFIR 994
BLAST of mRNA_H-akashiwo_Contig911.1.1 vs. uniprot
Match: UPI0018F8501A (uncharacterized mitochondrial protein AtMg00810-like n=5 Tax=Tripterygium wilfordii TaxID=458696 RepID=UPI0018F8501A) HSP 1 Score: 160 bits (405), Expect = 9.170e-44 Identity = 85/225 (37.78%), Postives = 127/225 (56.44%), Query Frame = 1 Query: 1 FYLSQTSFIKDALVKFGLNYLPACKTPIDHTVDLTPTPGFKAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQHDPEPKHFEAVQRAFRYLKGTQSESLHLGG--DLVLCAYSDSDFCADRIDGKSVTGYVLFLGDAPIVWSSKLQGAVTTSTVEAEYLDLRSSVKDIMWLRYLLADLGCPQQDPTPVVEDNSACIEWANDKVINKKNRHFHVSYHLAK 669 +YLSQ + D L + GL TP++ + L P+ G LSD LYR +VG+L ++ TRP++A+AVH + + P H+EAV RY+K T LH L L AYSDSD+ D D +S TG+ + LGD+ I W SK Q +V S+ AEY L ++ ++I+WLR+LL D+G PTP+ DN + I A++ V +++ +H + H + Sbjct: 133 YYLSQAKYASDLLARAGLTDSKITSTPLEPNIKLKPSDG--TPLSDITLYRQLVGSLVYLTV-TRPDIAYAVHVVSQFMSAPRSSHYEAVIHILRYIKATLYYGLHFSAASSLELRAYSDSDWAGDPTDRRSTTGFCILLGDSLISWRSKKQTSVARSSTVAEYRALATTTQEIVWLRWLLGDMGVQSPSPTPLFCDNRSAIHIAHNDVYHERTKHIEIDCHFTR 354
BLAST of mRNA_H-akashiwo_Contig911.1.1 vs. uniprot
Match: A0A2N9J7J4_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9J7J4_FAGSY) HSP 1 Score: 166 bits (421), Expect = 1.000e-43 Identity = 90/225 (40.00%), Postives = 125/225 (55.56%), Query Frame = 1 Query: 1 FYLSQTSFIKDALVKFGLNYLPACKTPIDHTVDLTPTPGFKAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQHDPEPKHFEAVQRAFRYLKGTQSESLHLGGD--LVLCAYSDSDFCADRIDGKSVTGYVLFLGDAPIVWSSKLQGAVTTSTVEAEYLDLRSSVKDIMWLRYLLADLGCPQQDPTPVVEDNSACIEWANDKVINKKNRHFHVSYHLAK 669 +YLSQ + D L K GL TP++ V L T G LSDA LYR +VG+L ++ TRP+LA+AVH + + P H+ AV R RY+KGT LH L L AY+D+D+ D D +S TGY LG + I W SK Q V S+ EAEY L + +++WLR+LLAD+G PQ TP+ DN + I A++ V ++ +H + H + Sbjct: 965 YYLSQAKYASDLLSKAGLTDSKTVSTPLELNVKLNTTDG--EPLSDATLYRQLVGSLIYLTV-TRPDLAYAVHLVSQFMSAPRSTHYAAVLRILRYIKGTLFHGLHFSAQSSLELRAYADADWAGDPTDRRSTTGYCFLLGSSLISWRSKKQSVVARSSTEAEYRALADATSELLWLRWLLADMGAPQTTSTPIHRDNRSAIHIAHNDVFHEHTKHIEIDCHFIR 1186 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig911.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig911.1.1 >prot_H-akashiwo_Contig911.1.1 ID=prot_H-akashiwo_Contig911.1.1|Name=mRNA_H-akashiwo_Contig911.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=223bp FYLSQTSFIKDALVKFGLNYLPACKTPIDHTVDLTPTPGFKAKLSDANLYback to top mRNA from alignment at H-akashiwo_Contig911:52540..53208+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig911.1.1 ID=mRNA_H-akashiwo_Contig911.1.1|Name=mRNA_H-akashiwo_Contig911.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=669bp|location=Sequence derived from alignment at H-akashiwo_Contig911:52540..53208+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig911:52540..53208+ >mRNA_H-akashiwo_Contig911.1.1 ID=mRNA_H-akashiwo_Contig911.1.1|Name=mRNA_H-akashiwo_Contig911.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=669bp|location=Sequence derived from alignment at H-akashiwo_Contig911:52540..53208+ (Heterosigma akashiwo CCMP452)back to top |