prot_H-akashiwo_Contig907.4.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig907.4.1
Unique Nameprot_H-akashiwo_Contig907.4.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length290
Homology
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BLAST of mRNA_H-akashiwo_Contig907.4.1 vs. uniprot
Match: A0A7S2V0S0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0S0_9STRA)

HSP 1 Score: 165 bits (418), Expect = 3.740e-46
Identity = 82/238 (34.45%), Postives = 142/238 (59.66%), Query Frame = 0 
Query:   39 WTDCPRYVYVSHKWLTPDHPDDSLSTILSVLSLVVKTMRVIEYIWFDFSCGPTDTTESALF--VSNLSNIISNSVRVLVIPFKSVGQEVAPIYDVKEFTTRAWCMLEASVFLKRPSKLRIAKISKSDDTFQLSMVNLPSRNVTDGISFLTEAYERVRDMVKTKEKGRFLESFHARNEADKEQIWAALVQMEAEIFSARRAESDFFVSRGQQPVSSSMKAVRGSNIYDQAVLKKLQTVR 274
            W+  PR+V++SH+WL+  HPDD L T   V+SL+ K  + ++Y+W D+ C P+ TT+      V  +  ++  S RV +IP      E  P+YD+ ++ +RAWC+ E ++FL+RPS +RIA++ K D +F L +V+LP+ + T+G+  L E ++ ++D V +  +  F+++FHA  E+DK  +W         IFS++R+ SD++    +   SS+   ++   +YD A  +  Q  R
Sbjct:    1 WSSAPRFVFISHRWLSYHHPDDCLKTKYLVISLIAKKFQGLKYMWIDYCCVPSPTTDILRLRAVWTVLEVVPRSARVFLIPL--APNEFPPVYDMNDYASRAWCVFEYALFLQRPSVMRIARVVKQDQSFHLRLVSLPTSDETNGVQRLVEGFQLIKDAVISGHQDIFMDNFHANVESDKLILWDLFSSEATTIFSSQRSHSDYYA---KSLASSNSTFIQEEELYDVAKCEAEQKSR 233
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig907.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S2V0S0_9STRA3.740e-4634.45Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig907contigH-akashiwo_Contig907:66400..68809 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig907.4.1mRNA_H-akashiwo_Contig907.4.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig907 66371..69605 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig907.4.1 ID=prot_H-akashiwo_Contig907.4.1|Name=mRNA_H-akashiwo_Contig907.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=290bp
MAGQGKPLIYLLHKDTLLNEKALPAFEDIKDRLHKVYNWTDCPRYVYVSH
KWLTPDHPDDSLSTILSVLSLVVKTMRVIEYIWFDFSCGPTDTTESALFV
SNLSNIISNSVRVLVIPFKSVGQEVAPIYDVKEFTTRAWCMLEASVFLKR
PSKLRIAKISKSDDTFQLSMVNLPSRNVTDGISFLTEAYERVRDMVKTKE
KGRFLESFHARNEADKEQIWAALVQMEAEIFSARRAESDFFVSRGQQPVS
SSMKAVRGSNIYDQAVLKKLQTVREYEGKDHPCQACIIS*
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