prot_H-akashiwo_Contig844.6.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig844.6.1
Unique Nameprot_H-akashiwo_Contig844.6.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length277
Homology
BLAST of mRNA_H-akashiwo_Contig844.6.1 vs. uniprot
Match: A0A6T5N514_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5N514_HETAK)

HSP 1 Score: 439 bits (1129), Expect = 5.460e-154
Identity = 245/279 (87.81%), Postives = 250/279 (89.61%), Query Frame = 0
Query:    1 MAPPAFKDISKAVTSIFKDDYGSDRKLTVKSKAGGLGFKVENSIVEGGAVAGLIEAKYAHSSGVSLDKLKLNAKGALSLETTVADVGTPGLDVYYKGDLDFSGTTGVSYKGRAVSSVRGGGRCRRWRPWRPTPPSRWTPPPPASH---TLKYGLAAGKGAGLADYALAAGYREKAWFASLAAEKKLSVFKLGAFWNACPPADVGAQVTYTPATGATLVDVGTVYNCNPTTTVRVKASSEGAVAAAVAQKCGKGMTLTAASEVSVSDLSKVKYGASITLG 276
            MAPPAFKDISKAVTSIFKDDYGSDRKLTVKSKAGGLGFKVENSIVEGGAVAGLIEAKYAHSSGVSLDKLKLNAKGALSLETTVADVGTPGLDVYYKGDLDFSGTTGVSYK  AV++           P      +  T    A+    +LKYGLAAGKGAGLADYALAAGYREKAWFASLAAEKKLSVFKLGAFWNACPPADVGAQVTYTPATGATLVDVGTVYNCNPTTTVRVKASSEGAVAAAVAQKCGKGMTLTAASEVSVSDLSKVKYGASITLG
Sbjct:    1 MAPPAFKDISKAVTSIFKDDYGSDRKLTVKSKAGGLGFKVENSIVEGGAVAGLIEAKYAHSSGVSLDKLKLNAKGALSLETTVADVGTPGLDVYYKGDLDFSGTTGVSYKDAAVNAS-----VEVDVPALAAVTANATVAVDAATAGLSLKYGLAAGKGAGLADYALAAGYREKAWFASLAAEKKLSVFKLGAFWNACPPADVGAQVTYTPATGATLVDVGTVYNCNPTTTVRVKASSEGAVAAAVAQKCGKGMTLTAASEVSVSDLSKVKYGASITLG 274          
BLAST of mRNA_H-akashiwo_Contig844.6.1 vs. uniprot
Match: A0A835YZM2_9STRA (Voltage dependent anion channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZM2_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.120e-28
Identity = 100/291 (34.36%), Postives = 144/291 (49.48%), Query Frame = 0
Query:    1 MAPPAFKDISKAVTSIFKDDYGSDRKLTVK-SKAGGLGFKVENSIVEGGAVAGLIEAKYAHS-SGVSLDKLKLNAKGALSLETTVADVGTPGLDVYYKGDLDFSGTTGVSYKGRAVSSVRGGGRCRRWRPWRPTPPSRWTPPPPASHTLKY-GLAAG----------KGAGLADYALAAGYREKAWFASLAAEKKLSVFKLGAFWNACPPADVGAQV--TYTPATGATLVDVGTVYNCNPTTTVRVKASSEGAVAAAVAQKCGKGMTLTAASEVSVSDLSKVKYGASITLG 276
            + PP +KD++K V  +  DD+   R + VK +    + F +EN   +G AVAG ++ KYAH  SG +LDK+ +   GA ++E ++A +  PGL +  K D    G  G  Y G   +                T           S T  Y G+ AG          K A L+DY     Y    WF +L    K++ + L A +   P  +V A V  + TP TGA  V VGT Y CNP TT+R KA+S+G + AAV  KC +G+ + AA+EV+  D+   K+G + TLG
Sbjct:    2 VVPPFYKDLTKVVNDLLTDDFSLKRTVKVKHTTPHNVNFTIENEH-KGSAVAGKVQLKYAHKPSGFALDKVTIAQNGAKTVECSLAGLA-PGLKLTAKVDDAIKGDVGAEYVGAGFAIK--------------TDMDVEATKMVTSATAAYEGVNAGGIISAKLPGDKPAALSDYNAGVAYGGTGWFTALTTTNKMATYNLSATY--APAKNVTAVVLASLTPETGAQSVVVGTKYVCNPNTTLRAKATSDGMLHAAVQHKCTQGLIIGAATEVNAKDMQP-KFGFNCTLG 273          
BLAST of mRNA_H-akashiwo_Contig844.6.1 vs. uniprot
Match: A0A812RZT6_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RZT6_SYMMI)

HSP 1 Score: 86.3 bits (212), Expect = 1.980e-16
Identity = 73/245 (29.80%), Postives = 108/245 (44.08%), Query Frame = 0
Query:   49 AVAGLIEAKYAHSSGVSLDKLKLNAKGALSLETTVADVGTPGLDVYYKGDLDFSGTTGVSYKGRAVSS----------------VRGGGRCRRWRPWRPTPPSRWTPPPPASHTLKYGLAAGKGAGLADYALAAGYR-EKAWFASLAAEKKLSVFKLGAFWNACPPADVGAQVTYTPATGATLVDVGTVYNCNPTTTVRVKASSEGAVAAAVAQKCGKGMTLTAASEVSVSDLSKVKYGASITLG 276
            ++ G + A++AH SG +LDKL++   G++++ET++ DV  PG+   +KGD       GV YK    ++                + G G                     AS TL  G        L  +  AA Y   K  FA L    K S + L   + ACP   +     +TP   AT +  G  Y CNP TTV+ KA S+G +  +V Q      ++T A++V  SD S  K G S ++G
Sbjct:   15 SLGGKVSARWAHPSGFNLDKLEVKGNGSVAVETSLTDVA-PGVKFEFKGDDQCKSDLGVQYKHEMATANVEFDVAEFSAVNASVLAGSGAFTGG----------------ASTTLTLG----DRMDLTRFDFAASYSVAKELFAGLHITNKFSKYALSLGYFACPKYQLAGVFNFTPEKSATHLVFGGSYKCNPDTTVKAKADSDGVLGLSVKQMLSSNCSITTAAQVPSSDFSAYKLGISGSIG 238          
BLAST of mRNA_H-akashiwo_Contig844.6.1 vs. uniprot
Match: A0A482S0R8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S0R8_9ARCH)

HSP 1 Score: 59.3 bits (142), Expect = 1.190e-6
Identity = 67/221 (30.32%), Postives = 108/221 (48.87%), Query Frame = 0
Query:   57 KYAHSSGVSLDKLKLNAKGALSLETTVADVGTPGLDVYYKGDLDFSGTTGVSYKGRAVSSVRGGGRCRRWRPWRPTPPSRWTPPPPASHTLKYGLAAGKGAGLADYALAAGYR-EKAWFASLAAEKKLSVFKLGAFWNACPPADVGAQVTYTPATGATLVDVGTVYNCNPTTTVRVKASSEGAVAAAVAQKCGKGMTLTAASEVSVSDLSKVKYGASITLG 276
            K++H+SG +++KL+  A G L++ET++ +V  PGL V +KG         V+Y    V++V        +   + T  +  + P  A  +    LA       A + L   Y   K    +  A+K LS +     + A     V  +V Y  A     V++ + Y+CNP TTV+VKA+S G  +AAV Q   K   +T ++E S ++ S V+ G + TLG
Sbjct:   57 KWSHTSGFTVEKLESAADGKLTVETSLVNVA-PGLKVEFKGKDTDKADVLVTYTA-PVATVTAEVDVSNFSSAK-TSVTAGSGPFTAGASADLKLAKSN-VDSASFGLGVAYSIPKQLLVTARADKNLSAYSALFSYAANKDIKVAGRVDY--AGKDPKVELVSTYDCNPCTTVKVKATSGGVFSAAVKQALDKKFNVTGSAEFS-NNFSNVRLGLNATLG 270          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig844.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6T5N514_HETAK5.460e-15487.81Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YZM2_9STRA1.120e-2834.36Voltage dependent anion channel n=1 Tax=Tribonema ... [more]
A0A812RZT6_SYMMI1.980e-1629.80Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
A0A482S0R8_9ARCH1.190e-630.32Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027246Eukaryotic porin/Tom40PFAMPF01459Porin_3coord: 159..261
e-value: 1.0E-10
score: 41.6
coord: 2..93
e-value: 8.8E-7
score: 28.7
IPR023614Porin domain superfamilyGENE3D2.40.160.10Porincoord: 1..117
e-value: 6.9E-15
score: 56.9
coord: 147..276
e-value: 3.3E-18
score: 67.9
IPR001925Porin, eukaryotic typePANTHERPTHR11743VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNELcoord: 155..275
coord: 1..93
NoneNo IPR availablePANTHERPTHR11743:SF23GH26960P-RELATEDcoord: 155..275
coord: 1..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig844contigH-akashiwo_Contig844:459393..484200 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig844.6.1mRNA_H-akashiwo_Contig844.6.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig844 459362..484418 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig844.6.1 ID=prot_H-akashiwo_Contig844.6.1|Name=mRNA_H-akashiwo_Contig844.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=277bp
MAPPAFKDISKAVTSIFKDDYGSDRKLTVKSKAGGLGFKVENSIVEGGAV
AGLIEAKYAHSSGVSLDKLKLNAKGALSLETTVADVGTPGLDVYYKGDLD
FSGTTGVSYKGRAVSSVRGGGRCRRWRPWRPTPPSRWTPPPPASHTLKYG
LAAGKGAGLADYALAAGYREKAWFASLAAEKKLSVFKLGAFWNACPPADV
GAQVTYTPATGATLVDVGTVYNCNPTTTVRVKASSEGAVAAAVAQKCGKG
MTLTAASEVSVSDLSKVKYGASITLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027246Porin_Euk/Tom40
IPR023614Porin_dom_sf
IPR001925Porin_Euk