mRNA_H-akashiwo_Contig1219.3.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1219.3.1 vs. uniprot
Match: A0A7S3Y8N4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8N4_HETAK) HSP 1 Score: 200 bits (508), Expect = 2.770e-57 Identity = 94/114 (82.46%), Postives = 109/114 (95.61%), Query Frame = 1
Query: 7 PQNYRPVSVLPTLATTFERVLMPQLSAFLLPHIPEEQFVFIPDTGTLDVGAVLADQIAQALQAKKDVRLVALDFKGAFDKVWWRGLLSHLWAVGVRAKAYKLFESYLSDRALFV 348
P+NYRP+SVLPTLATTFERVLMPQL++FL+ HIP QF F+PDTGTLDVG +LADQI++AL+A+KDVRLVALDF+GAFDKVWWRGLL+HLWAVGVR+KAY+LFESYLSDRALFV
Sbjct: 384 PKNYRPISVLPTLATTFERVLMPQLASFLIEHIPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYLSDRALFV 497
BLAST of mRNA_H-akashiwo_Contig1219.3.1 vs. uniprot
Match: A0A7S3Y8Z6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8Z6_HETAK) HSP 1 Score: 187 bits (475), Expect = 1.820e-53 Identity = 87/107 (81.31%), Postives = 102/107 (95.33%), Query Frame = 1
Query: 7 PQNYRPVSVLPTLATTFERVLMPQLSAFLLPHIPEEQFVFIPDTGTLDVGAVLADQIAQALQAKKDVRLVALDFKGAFDKVWWRGLLSHLWAVGVRAKAYKLFESYL 327
P+NYRP+SVLPTLATTFERVLMPQL++FL+ HIP QF F+PDTGTLDVG +LADQI++AL+A+KDVRLVALDF+GAFDKVWWRGLL+HLWAVGVR+KAY+LFESYL
Sbjct: 384 PKNYRPISVLPTLATTFERVLMPQLASFLIEHIPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYL 490
BLAST of mRNA_H-akashiwo_Contig1219.3.1 vs. uniprot
Match: A0A7S3Y8J9_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8J9_HETAK) HSP 1 Score: 95.5 bits (236), Expect = 3.750e-21 Identity = 44/52 (84.62%), Postives = 49/52 (94.23%), Query Frame = 1
Query: 193 AKKDVRLVALDFKGAFDKVWWRGLLSHLWAVGVRAKAYKLFESYLSDRALFV 348
A+KDVRLV LDFKGA DKVWWRGLL+HLWAVGVR+KA+KL +SYLSDRALFV
Sbjct: 1 ARKDVRLVELDFKGACDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFV 52
BLAST of mRNA_H-akashiwo_Contig1219.3.1 vs. uniprot
Match: A0A7S3Y8U8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8U8_HETAK) HSP 1 Score: 89.0 bits (219), Expect = 4.920e-18 Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 1
Query: 214 VALDFKGAFDKVWWRGLLSHLWAVGVRAKAYKLFESYLSDRALFV 348
VALDFKGAFDKVWWRGLL+HLWAVGVR+KA+KL +SYLSDRALFV
Sbjct: 1 VALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFV 45
BLAST of mRNA_H-akashiwo_Contig1219.3.1 vs. uniprot
Match: A0A821XHH9_9NEOP (Hypothetical protein n=1 Tax=Pieris macdunnoughi TaxID=345717 RepID=A0A821XHH9_9NEOP) HSP 1 Score: 79.0 bits (193), Expect = 2.930e-14 Identity = 51/149 (34.23%), Postives = 81/149 (54.36%), Query Frame = 1
Query: 1 TDPQNYRPVSVLPTLATTFERVLMPQLSAFLLPH--IPEEQFVFIPDTGTLDVGAVLADQIAQALQAKKDVRLVALDFKGAFDKVWWRGLLSHLWAVGVRAKAYKLFESYLSDRALFVASVMVRSQSMWASSPAYRRAPSGLLFFLTFL 441
T+P NYRP+S+LPT++ E+++ +L +L + I + Q+ F + TL A L I Q + +KK V V +D K AFD V LL L +G++ +A KLF+SYLS+R V +S + + + + G L FL ++
Sbjct: 546 TEPGNYRPISILPTISKILEKIIYSRLDTYLQTNNFIFKRQYGFRSKSSTLSATADLVSDIKQNIDSKKMVLGVFIDLKKAFDTVSHNLLLKKLECIGIKDRALKLFKSYLSNRTQIVKIGNAQSSEIPITCGVPQGSILGPLLFLIYI 694
BLAST of mRNA_H-akashiwo_Contig1219.3.1 vs. uniprot
Match: A0A6J1N3M6_BICAN (uncharacterized protein LOC112046957 n=1 Tax=Bicyclus anynana TaxID=110368 RepID=A0A6J1N3M6_BICAN) HSP 1 Score: 78.6 bits (192), Expect = 3.880e-14 Identity = 44/112 (39.29%), Postives = 67/112 (59.82%), Query Frame = 1
Query: 7 PQNYRPVSVLPTLATTFERVLMPQLSAFL--LPHIPEEQFVFIPDTGTLDVGAVLADQIAQALQAKKDVRLVALDFKGAFDKVWWRGLLSHLWAVGVRAKAYKLFESYLSDR 336
P NYRP+SVLP ++ FE+V+ +L ++L + ++ +Q+ F + TL L +I + AKK + +D K AFD V + LL L +G+ KAYK+FESYL+DR
Sbjct: 522 PSNYRPISVLPVMSKIFEKVIYNRLESYLNSINYLYPKQYGFRSKSNTLSATVDLVTKIKNNIDAKKIALGIFIDLKKAFDTVSHKILLKKLQDIGITDKAYKIFESYLTDR 633
BLAST of mRNA_H-akashiwo_Contig1219.3.1 vs. uniprot
Match: A0A8J9YV55_BRALA (SLC22A5 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9YV55_BRALA) HSP 1 Score: 77.0 bits (188), Expect = 1.380e-13 Identity = 49/140 (35.00%), Postives = 73/140 (52.14%), Query Frame = 1
Query: 4 DPQNYRPVSVLPTLATTFERVLMPQLSAFLLPH--IPEEQFVFIPDTGTLDVGAVLADQIAQALQAKKDVRLVALDFKGAFDKVWWRGLLSHLWAVGVRAKAYKLFESYLSDRALFVASVMVRSQSMWASSPAYRRAPSG 417
+P YRP+ +L ++ E + QL +LL + I + QF F P T D+ +L+ + AL +VR +ALD KGAFDKVW GL S L + G+ K SYL +R++ V++ QS ++P P G
Sbjct: 606 NPAMYRPILLLSNISKVMEPAVQAQLHKYLLQNKLISDRQFGFRPHQSTADILTILSQHWSNALDRGYEVRHIALDIKGAFDKVWHNGLCSKLKSKGISGKLLTWISSYLLNRSM---KVVLSGQSS-TTTPINASVPLG 741
BLAST of mRNA_H-akashiwo_Contig1219.3.1 vs. uniprot
Match: UPI001E2701EB (uncharacterized protein K02A2.6-like n=3 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E2701EB) HSP 1 Score: 75.1 bits (183), Expect = 6.680e-13 Identity = 43/113 (38.05%), Postives = 63/113 (55.75%), Query Frame = 1
Query: 4 DPQNYRPVSVLPTLATTFERVLMPQLSAFLLPH--IPEEQFVFIPDTGTLDVGAVLADQIAQALQAKKDVRLVALDFKGAFDKVWWRGLLSHLWAVGVRAKAYKLFESYLSDR 336
DP NYRPVSVLP ++ FER+L +L+ +L + +Q+ F + TL L +I + K + +D K AFD V LL L +G+R +A+K+FESYL +R
Sbjct: 1124 DPNNYRPVSVLPVISKIFERILYKRLNTYLSEKQFLISQQYGFRSKSSTLTAAIDLVTEIRSQIDKKNFALGIFIDLKKAFDTVSHGKLLLKLGNIGIRGRAFKIFESYLQNR 1236
BLAST of mRNA_H-akashiwo_Contig1219.3.1 vs. uniprot
Match: A0A8J9YR33_BRALA (Hypp5830 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9YR33_BRALA) HSP 1 Score: 73.2 bits (178), Expect = 2.980e-12 Identity = 41/115 (35.65%), Postives = 63/115 (54.78%), Query Frame = 1
Query: 4 DPQNYRPVSVLPTLATTFERVLMPQLSAFLLPH--IPEEQFVFIPDTGTLDVGAVLADQIAQALQAKKDVRLVALDFKGAFDKVWWRGLLSHLWAVGVRAKAYKLFESYLSDRAL 342
DP NYRP+S+L ++ E ++ L + + I ++QF F T D + + A +++ RL+ LD AFD+VW RGL++ L A+GV K FE+YL+DR L
Sbjct: 406 DPNNYRPISLLCIISKVMEAIINKALWQHIDKNSLISDKQFGFRAGHSTADALTYVTQHLHDAKDKRQESRLICLDISRAFDRVWHRGLIAKLKAIGVDGHVLKWFENYLADREL 520
BLAST of mRNA_H-akashiwo_Contig1219.3.1 vs. uniprot
Match: A0A2P2HZB6_9CRUS (Pol-like protein (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2HZB6_9CRUS) HSP 1 Score: 71.2 bits (173), Expect = 1.370e-11 Identity = 42/114 (36.84%), Postives = 65/114 (57.02%), Query Frame = 1
Query: 13 NYRPVSVLPTLATTFERVLMPQLSAFLLPH--IPEEQFVFIPDTGTLDVGAVLADQIAQALQAKKDVRLVALDFKGAFDKVWWRGLLSHLWAVGVRAKAYKLFESYLSDRALFV 348
+YRP+++L T+ FE+++ +L FL + + Q F T+DV L + I Q++ A + V LD KGA+DKVW RGLL L +G+ +K ++YLS+R FV
Sbjct: 518 SYRPITLLSTIGKLFEKMICRRLDFFLEKNRRLGSFQTGFRKGLSTIDVLLRLQNNIRQSIDASRYCIAVYLDLKGAYDKVWHRGLLYKLSKLGIFGNMFKWIKAYLSERKFFV 631 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1219.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1219.3.1 >prot_H-akashiwo_Contig1219.3.1 ID=prot_H-akashiwo_Contig1219.3.1|Name=mRNA_H-akashiwo_Contig1219.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=148bp TDPQNYRPVSVLPTLATTFERVLMPQLSAFLLPHIPEEQFVFIPDTGTLDback to top mRNA from alignment at H-akashiwo_Contig1219:27122..27565- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1219.3.1 ID=mRNA_H-akashiwo_Contig1219.3.1|Name=mRNA_H-akashiwo_Contig1219.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=444bp|location=Sequence derived from alignment at H-akashiwo_Contig1219:27122..27565- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1219:27122..27565- >mRNA_H-akashiwo_Contig1219.3.1 ID=mRNA_H-akashiwo_Contig1219.3.1|Name=mRNA_H-akashiwo_Contig1219.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=444bp|location=Sequence derived from alignment at H-akashiwo_Contig1219:27122..27565- (Heterosigma akashiwo CCMP452)back to top |