prot_H-akashiwo_Contig807.12.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig807.12.1
Unique Nameprot_H-akashiwo_Contig807.12.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length91
Homology
BLAST of mRNA_H-akashiwo_Contig807.12.1 vs. uniprot
Match: B2XTB2_HETAK (50S ribosomal protein L2 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XTB2_HETAK)

HSP 1 Score: 176 bits (447), Expect = 4.860e-56
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
Query:    1 MAHKKGAGSTKNGRDSNSKRLGVKCFQNHKVSKGSIIIRQRGLRVKAGENIGIGKDFTLYALEAGLVKFKKSRNKTIVSIENCNFLNVEV 90
            MAHKKGAGSTKNGRDSNSKRLGVKCFQNHKVSKGSIIIRQRGLRVKAGENIGIGKDFTLYALEAGLVKFKKSRNKTIVSIENCNFLNVEV
Sbjct:    1 MAHKKGAGSTKNGRDSNSKRLGVKCFQNHKVSKGSIIIRQRGLRVKAGENIGIGKDFTLYALEAGLVKFKKSRNKTIVSIENCNFLNVEV 90          
BLAST of mRNA_H-akashiwo_Contig807.12.1 vs. uniprot
Match: B7T238_VAULI (50S ribosomal protein L27, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T238_VAULI)

HSP 1 Score: 125 bits (314), Expect = 7.230e-36
Identity = 61/80 (76.25%), Postives = 72/80 (90.00%), Query Frame = 0
Query:    1 MAHKKGAGSTKNGRDSNSKRLGVKCFQNHKVSKGSIIIRQRGLRVKAGENIGIGKDFTLYALEAGLVKFKKSRNKTIVSI 80
            MAHKKGAGSTKNGRDSN+KRLGVKC+Q+HKV  G+II+RQRGL+ K G+NIGIGKDFTLY+L  GLVKFKKS+N+T + I
Sbjct:    1 MAHKKGAGSTKNGRDSNAKRLGVKCYQDHKVKAGNIIVRQRGLKYKPGKNIGIGKDFTLYSLINGLVKFKKSKNQTTIYI 80          
BLAST of mRNA_H-akashiwo_Contig807.12.1 vs. uniprot
Match: A0A8F0F6S3_AKKLU (Ribosomal protein L27 n=2 Tax=Phaeophyceae TaxID=2870 RepID=A0A8F0F6S3_AKKLU)

HSP 1 Score: 123 bits (308), Expect = 6.120e-35
Identity = 59/81 (72.84%), Postives = 68/81 (83.95%), Query Frame = 0
Query:    1 MAHKKGAGSTKNGRDSNSKRLGVKCFQNHKVSKGSIIIRQRGLRVKAGENIGIGKDFTLYALEAGLVKFKKSRNKTIVSIE 81
            MAHKKGAGSTKNGRDS SKRLGVKCFQ HKV  G+I+IRQRGL  K GEN+GIG+D+TLYAL+ GLV FKK   KT +S++
Sbjct:    1 MAHKKGAGSTKNGRDSKSKRLGVKCFQGHKVQAGNILIRQRGLSYKPGENVGIGRDYTLYALKEGLVSFKKKNKKTCISVD 81          
BLAST of mRNA_H-akashiwo_Contig807.12.1 vs. uniprot
Match: A0A7S6U9S9_9STRA (50S ribosomal protein L27, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9S9_9STRA)

HSP 1 Score: 121 bits (303), Expect = 3.640e-34
Identity = 59/81 (72.84%), Postives = 69/81 (85.19%), Query Frame = 0
Query:    1 MAHKKGAGSTKNGRDSNSKRLGVKCFQNHKVSKGSIIIRQRGLRVKAGENIGIGKDFTLYALEAGLVKFKKSRNKTIVSIE 81
            MAHKKGAGSTKNGRDSNSKRLGVKCF  HKVS GSII+RQRGL  K G N+G+GKD+T+YAL++GLV F   +NK I+SI+
Sbjct:    1 MAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYFNTKKNKKIISIK 81          
BLAST of mRNA_H-akashiwo_Contig807.12.1 vs. uniprot
Match: A0A0R6MBY3_UNDPI (50S ribosomal protein L27, chloroplastic n=23 Tax=Laminariales TaxID=2886 RepID=A0A0R6MBY3_UNDPI)

HSP 1 Score: 120 bits (301), Expect = 7.560e-34
Identity = 58/80 (72.50%), Postives = 67/80 (83.75%), Query Frame = 0
Query:    1 MAHKKGAGSTKNGRDSNSKRLGVKCFQNHKVSKGSIIIRQRGLRVKAGENIGIGKDFTLYALEAGLVKFKKSRNKTIVSI 80
            MAHKKGAGSTKNGRDS SKRLGVKCFQ H V  G+I+IRQRGL  K G+N+GIGKD+TLYAL AGLV FKK + +T +S+
Sbjct:    1 MAHKKGAGSTKNGRDSKSKRLGVKCFQGHPVEAGNILIRQRGLSFKPGDNVGIGKDYTLYALTAGLVSFKKKKKQTCISV 80          
BLAST of mRNA_H-akashiwo_Contig807.12.1 vs. uniprot
Match: A0A8F0F9K0_9PHAE (Ribosomal protein L27 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F9K0_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 8.570e-33
Identity = 56/81 (69.14%), Postives = 66/81 (81.48%), Query Frame = 0
Query:    1 MAHKKGAGSTKNGRDSNSKRLGVKCFQNHKVSKGSIIIRQRGLRVKAGENIGIGKDFTLYALEAGLVKFKKSRNKTIVSIE 81
            MAHKKGAGSTKNGRDS SKRLGVKCFQ H V  G+I+IRQRGL  K G N+G+G+D+TLYAL+ GLV FKK   KT +S++
Sbjct:    1 MAHKKGAGSTKNGRDSKSKRLGVKCFQGHPVQAGNILIRQRGLSFKPGSNVGVGRDYTLYALKEGLVSFKKVNKKTCISVD 81          
BLAST of mRNA_H-akashiwo_Contig807.12.1 vs. uniprot
Match: A0A2R4QPT1_9PHAE (50S ribosomal protein L27 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPT1_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 1.680e-32
Identity = 57/82 (69.51%), Postives = 66/82 (80.49%), Query Frame = 0
Query:    1 MAHKKGAGSTKNGRDSNSKRLGVKCFQNHKVSKGSIIIRQRGLRVKAGENIGIGKDFTLYALEAGLVKFKKSRNKTIVSIEN 82
            MAHKKGAGSTKNGRDS  KRLGVKCF  H+V  G+I+IRQRGL  K G+N+GIGKD+TLYAL+ G+V FKKS   T +SI N
Sbjct:    1 MAHKKGAGSTKNGRDSKPKRLGVKCFHGHQVKAGNILIRQRGLTFKPGDNVGIGKDYTLYALKEGMVYFKKSNTTTSISISN 82          
BLAST of mRNA_H-akashiwo_Contig807.12.1 vs. uniprot
Match: A0A6B7EYQ0_9PHAE (50S ribosomal protein L27 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EYQ0_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 3.920e-32
Identity = 58/80 (72.50%), Postives = 65/80 (81.25%), Query Frame = 0
Query:    1 MAHKKGAGSTKNGRDSNSKRLGVKCFQNHKVSKGSIIIRQRGLRVKAGENIGIGKDFTLYALEAGLVKFKKSRNKTIVSI 80
            MAHKKGAGSTKNGRDSNSKRLGVKCF  HKV  GSI+IRQRG   + G+N+GIG+D+TLYA   GLV FKK R KT VS+
Sbjct:    1 MAHKKGAGSTKNGRDSNSKRLGVKCFHGHKVQAGSILIRQRGETFEPGKNVGIGRDYTLYASVDGLVSFKKKRRKTFVSV 80          
BLAST of mRNA_H-akashiwo_Contig807.12.1 vs. uniprot
Match: A0A8E6D6A3_9PHAE (50S ribosomal protein L27, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D6A3_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 9.720e-32
Identity = 59/81 (72.84%), Postives = 69/81 (85.19%), Query Frame = 0
Query:    1 MAHKKGAGSTKNGRDSNSKRLGVKCFQNHKVSKGSIIIRQRGLRVKAGENIGIGKDFTLYALEAGLVKFKKSR-NKTIVSI 80
            MAHKKGAGSTKNGRDS SKRLGVKC Q +KV  G+IIIRQRGL++KAG+N+GIGKD+TLYAL  G V FKK+R + T VS+
Sbjct:    1 MAHKKGAGSTKNGRDSQSKRLGVKCVQGYKVQAGNIIIRQRGLKIKAGKNVGIGKDYTLYALTKGYVLFKKARKSSTSVSV 81          
BLAST of mRNA_H-akashiwo_Contig807.12.1 vs. uniprot
Match: A0A141BSB3_9PHAE (50S ribosomal protein L27, chloroplastic n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSB3_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 1.380e-31
Identity = 55/80 (68.75%), Postives = 67/80 (83.75%), Query Frame = 0
Query:    1 MAHKKGAGSTKNGRDSNSKRLGVKCFQNHKVSKGSIIIRQRGLRVKAGENIGIGKDFTLYALEAGLVKFKKSRNKTIVSI 80
            MAHKKGAGSTKNGRDS SKRLGVKCF  H+V  G+I+IRQRGL+ K G+N+GIG+D+TLYAL+ GLV FKK+   T +S+
Sbjct:    1 MAHKKGAGSTKNGRDSKSKRLGVKCFHGHQVRAGNILIRQRGLKFKPGQNVGIGRDYTLYALKEGLVFFKKTTKDTSISV 80          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig807.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B2XTB2_HETAK4.860e-56100.0050S ribosomal protein L2 n=2 Tax=Heterosigma akash... [more]
B7T238_VAULI7.230e-3676.2550S ribosomal protein L27, chloroplastic n=1 Tax=V... [more]
A0A8F0F6S3_AKKLU6.120e-3572.84Ribosomal protein L27 n=2 Tax=Phaeophyceae TaxID=2... [more]
A0A7S6U9S9_9STRA3.640e-3472.8450S ribosomal protein L27, chloroplastic n=1 Tax=S... [more]
A0A0R6MBY3_UNDPI7.560e-3472.5050S ribosomal protein L27, chloroplastic n=23 Tax=... [more]
A0A8F0F9K0_9PHAE8.570e-3369.14Ribosomal protein L27 n=2 Tax=Laminariales TaxID=2... [more]
A0A2R4QPT1_9PHAE1.680e-3269.5150S ribosomal protein L27 n=3 Tax=Fucaceae TaxID=3... [more]
A0A6B7EYQ0_9PHAE3.920e-3272.5050S ribosomal protein L27 n=1 Tax=Cladosiphon okam... [more]
A0A8E6D6A3_9PHAE9.720e-3272.8450S ribosomal protein L27, chloroplastic n=1 Tax=I... [more]
A0A141BSB3_9PHAE1.380e-3168.7550S ribosomal protein L27, chloroplastic n=14 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001684Ribosomal protein L27PRINTSPR00063RIBOSOMALL27coord: 4..28
score: 64.92
coord: 54..78
score: 43.08
coord: 29..53
score: 47.08
IPR001684Ribosomal protein L27TIGRFAMTIGR00062TIGR00062coord: 1..80
e-value: 1.5E-32
score: 109.4
IPR001684Ribosomal protein L27PFAMPF01016Ribosomal_L27coord: 2..80
e-value: 1.7E-33
score: 114.5
IPR001684Ribosomal protein L27PANTHERPTHR15893RIBOSOMAL PROTEIN L27coord: 1..81
NoneNo IPR availableGENE3D2.40.50.100coord: 6..87
e-value: 9.8E-26
score: 91.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableSUPERFAMILY110324Ribosomal L27 protein-likecoord: 2..78
IPR018261Ribosomal protein L27, conserved sitePROSITEPS00831RIBOSOMAL_L27coord: 34..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig807contigH-akashiwo_Contig807:13505..13777 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig807.12.1mRNA_H-akashiwo_Contig807.12.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig807 13505..13777 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig807.12.1 ID=prot_H-akashiwo_Contig807.12.1|Name=mRNA_H-akashiwo_Contig807.12.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=91bp
MAHKKGAGSTKNGRDSNSKRLGVKCFQNHKVSKGSIIIRQRGLRVKAGEN
IGIGKDFTLYALEAGLVKFKKSRNKTIVSIENCNFLNVEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001684Ribosomal_L27
IPR018261Ribosomal_L27_CS