mRNA_H-akashiwo_Contig1205.2.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1205.2.1 vs. uniprot
Match: A0A7S4DD44_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD44_HETAK) HSP 1 Score: 613 bits (1581), Expect = 1.210e-211 Identity = 306/317 (96.53%), Postives = 313/317 (98.74%), Query Frame = 1
Query: 1 VRLDGMDFERRVLDHERPYPPERRALDVTLGSREEWAEDMIEDVWRAGGRVIFTDGSKMPEKGVGAAYVAMGPGGEVEASGLFKLPDYCTVYQAEAVALRESQKRMESREERRLMASDSRAVLSSVSGQSRMTTLVAEIADGARAGDSFLYIPGHQGHAGNEKADELAKLAVEMGKEVQVPVPRAHTRQIARERTWRQWSEEWSALRALEEDGGQAQGGGKAYFKFAPGLGDLKANVWGNDKVDSSVLQLLSGHCNFGAYLHRFGRRDTPECTFCGKDEESVGHFLLECKRWDRERNVISDLIDKGNEEASLQALLQ 951
VRLDGMDFERRVLDHERPYPPERR DVTLGSREEWAEDMIEDVWRAGGRVIFTDGSK+PEKGVGAAYVAMGPGGEVEASGLFKLPDYCTVYQAEAVALRESQKR+ESREERRLMASDSRAVLSSVSGQSRMTTLVAEIADGARAGDSFLYIPGH+GHAGNEKADELAKLAVEMG+EVQVPVPRAHTRQ+ARERTWR+W+EEWSALRALEEDGGQAQGGGKAYFKFAPGLGDLKANVWGNDKVDSSVLQLLSGHCN GAYLHRFGRRDTPECTFCGKDEESVGHFLLECKRWDRERN ISDLIDKGNEEASLQALLQ
Sbjct: 651 VRLDGMDFERRVLDHERPYPPERRTPDVTLGSREEWAEDMIEDVWRAGGRVIFTDGSKIPEKGVGAAYVAMGPGGEVEASGLFKLPDYCTVYQAEAVALRESQKRVESREERRLMASDSRAVLSSVSGQSRMTTLVAEIADGARAGDSFLYIPGHKGHAGNEKADELAKLAVEMGEEVQVPVPRAHTRQLARERTWRRWAEEWSALRALEEDGGQAQGGGKAYFKFAPGLGDLKANVWGNDKVDSSVLQLLSGHCNLGAYLHRFGRRDTPECTFCGKDEESVGHFLLECKRWDRERNEISDLIDKGNEEASLQALLQ 967
BLAST of mRNA_H-akashiwo_Contig1205.2.1 vs. uniprot
Match: A0A7S3Y0N9_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0N9_HETAK) HSP 1 Score: 350 bits (898), Expect = 1.130e-114 Identity = 185/321 (57.63%), Postives = 236/321 (73.52%), Query Frame = 1
Query: 1 VRLDGMDFERRVLDHERPYPPERRALDVTLGSREEWAEDMIEDVWRAGGRVIFTDGSKMPEKGVGAAYVAMGPGGEVEASGLFKLPDYCTVYQAEAVALRESQKRMESREERR----LMASDSRAVLSSVSGQSRMTTLVAEIADGARAGDSFLYIPGHQGHAGNEKADELAKLAVEMGKEVQVPVPRAHTRQIARERTWRQWSEEWSALRALEEDGGQAQGGGKAYFKFAPGLGDLKANVWGNDKVDSSVLQLLSGHCNFGAYLHRFGRRDTPECTFCGKDEESVGHFLLECKRWDRERNVISDLIDKGNEEASLQALLQ 951
+ L +++ERR+ D E PYPP R+ LD++LGSRE WAED + + G VIFTDGSK+P +GVGAA+VAM G V+ASG FKLPD+ T YQAEAV +RE + +E E R+ ++A+D AVLS++ G SRMT LVA++ D AR G SF+YIP H+GHAGNEKADELAK AVE G V+V VPR +T+ +ARERTWR W+ EW A+RA +E G+ + + Y +FAP L DLKA VW + KVD+ VLQL+SGHCN G YLHRFGRR+TPEC CG + E+V H+LL C+RWDRERN I DL+ + +E ASL+ LLQ
Sbjct: 183 IVLGDVEYERRLHDFELPYPPYRKVLDISLGSREGWAEDRLTGLDAETG-VIFTDGSKIPGQGVGAAFVAMDKDGVVQASGKFKLPDFSTNYQAEAVGMREGLEWVEEDEGRKAGKWVVATDGLAVLSAMQGGSRMTPLVAQVVDKAREGISFVYIPAHKGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRLWAAEWEAMRAEDEAKGEGERR-RTYLEFAPSLEDLKAGVW-DKKVDARVLQLVSGHCNLGEYLHRFGRRETPECALCGVEAETVAHYLLRCRRWDRERNEIMDLVKRDDETASLRGLLQ 500
BLAST of mRNA_H-akashiwo_Contig1205.2.1 vs. uniprot
Match: A0A7S3Y8S2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8S2_HETAK) HSP 1 Score: 281 bits (720), Expect = 1.900e-86 Identity = 165/321 (51.40%), Postives = 206/321 (64.17%), Query Frame = 1
Query: 1 VRLDGMDFERRVLDHERPYPPERRALDVTLGSREEWAEDMIEDVWRAGGRVIFTDGSKMPEKGVGAAYVAMGPGGEVEASGLFKLPDYCTVYQAEAVALRESQK--RMESREERRLMASDSRAVLSSVSGQSRMTTLVAEIADGARAGDSFLYIPGHQGHAGNEKADELAKLAVEMGKEVQVPVPRAHTRQIARERTWRQWSEEWSALRALEEDGGQAQGGGKAYFKFAPGLGDLKANVWGNDKVDSS-VLQLLSGHCNFGAYLHRFGRRDTPECTFCGKDE-ESVGHFLLECKRWDRERNVISDLIDKGNEEASLQALLQ 951
V L G FER +LDHE PYPP R A+ VTLGSR+ WAE+++E GGR IFTDGSK+ + VGAA+VA G GL++LP YCTVYQAE +A RES + + R ++ASDS AVL+ + RMT LV+EIA SF+YIPGHQGH GNE AD+LAK A G EV+V VPRA TR++A+ERTW W++EW R LE G G KAY +FAP L D+K VW K VLQLLSGHCN YLH G+RD +C CG+ E E V H+LL C RW +R +SDLI + + +AS+ +L+
Sbjct: 331 VDLQGT-FERIMLDHELPYPPLRTAVKVTLGSRDAWAEELLEGA--RGGR-IFTDGSKLEDGSVGAAFVAFNRRGREVGRGLYRLPHYCTVYQAEGLAQRESARWTKEPGRGGEWMVASDSLAVLACLKSGRRMTRLVSEIAQEVEDRHSFVYIPGHQGHEGNEVADQLAKEAANAGIEVEVDVPRAFTRRLAKERTWGVWAQEW---RDLEHGSGMDMGEDKAYLRFAPTLEDIKEAVWKGGKAGGHRVLQLLSGHCNLAGYLHSRGKRDGAQCDNCGRGEKEDVEHYLLHCPRWGAQRQEMSDLIVQNDAQASMANMLK 644
BLAST of mRNA_H-akashiwo_Contig1205.2.1 vs. uniprot
Match: A0A7S4DA11_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DA11_HETAK) HSP 1 Score: 240 bits (613), Expect = 4.870e-75 Identity = 136/242 (56.20%), Postives = 174/242 (71.90%), Query Frame = 1
Query: 1 VRLDGMDFERRVLDHERPYPPERRALDVTLGSREEWAEDMIEDVWRAGGRVIFTDGSKMPEKGVGAAYVAMGPGGEVEASGLFKLPDYCTVYQAEAVALRESQKRMESREERR----LMASDSRAVLSSVSGQSRMTTLVAEIADGARAGDSFLYIPGHQGHAGNEKADELAKLAVEMGKEVQVPVPRAHTRQIARERTWRQWSEEWSALRALEEDGGQAQGGGKAYFKFAPGLGDLKANVW 714
V L +++ERR+ D E PYPP R+ LD++LGSRE WAED + + G VIFTDGSK+P +GVGAA+VAM G V+ASG FKLPD+ T YQAEAV +RE + +E E R+ ++A+D AVLS++ G SRMT LVA++ D AR G SF+YIP H+GHAGNEKADELAK AVE G V+V VPR +T+ +ARERTWR W+ EW A+RA +E G+ + + Y +FAP L DLKA VW
Sbjct: 29 VVLGCVEYERRLHDFELPYPPYRKVLDISLGSREGWAEDRLTGLDAETG-VIFTDGSKIPGQGVGAAFVAMDKDGVVQASGKFKLPDFSTNYQAEAVGMREGLEWVEEDEGRKAGKWVVATDGLAVLSAMQGGSRMTPLVAQVVDKAREGISFVYIPAHKGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRLWAAEWEAMRAEDEAKGEGERR-RTYLEFAPTLEDLKAGVW 268
BLAST of mRNA_H-akashiwo_Contig1205.2.1 vs. uniprot
Match: A0A7S3Y0N7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0N7_HETAK) HSP 1 Score: 217 bits (552), Expect = 3.600e-64 Identity = 124/223 (55.61%), Postives = 159/223 (71.30%), Query Frame = 1
Query: 1 VRLDGMDFERRVLDHERPYPPERRALDVTLGSREEWAEDMIEDVWRAGGRVIFTDGSKMPEKGVGAAYVAMGPGGEVEASGLFKLPDYCTVYQAEAVALRESQKRMESREERR----LMASDSRAVLSSVSGQSRMTTLVAEIADGARAGDSFLYIPGHQGHAGNEKADELAKLAVEMGKEVQVPVPRAHTRQIARERTWRQWSEEWSALRALEEDGGQAQGG 657
+ L +++ERR+ D E PYPP R+ LD++LGSRE WAED + + G VIFTDGSK+P +GVGAA+VAM G V+ASG FKLPD+ T YQAEAV +RE + +E E R+ ++A+D AVLS++ G SRMT LVA++ D AR G SF+YIP H+GHAGNEKADELAK AVE G V+V VPR +T+ +ARERTWR W E A+ A +E G+ GG
Sbjct: 183 IVLGDVEYERRLHDFELPYPPYRKVLDISLGSREGWAEDRLTGLDAETG-VIFTDGSKIPGQGVGAAFVAMDKDGVVQASGKFKLPDFSTNYQAEAVGMREGLEWVEEDEGRKAGKWVVATDGLAVLSAMQGGSRMTPLVAQVVDKAREGISFVYIPAHKGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRLWVAELEAMGAEDEARGKGSGG 404
BLAST of mRNA_H-akashiwo_Contig1205.2.1 vs. uniprot
Match: A0A7S3XUZ3_HETAK (Hypothetical protein (Fragment) n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUZ3_HETAK) HSP 1 Score: 168 bits (425), Expect = 1.270e-46 Identity = 99/182 (54.40%), Postives = 126/182 (69.23%), Query Frame = 1
Query: 1 VRLDGMDFERRVLDHERPYPPERRALDVTLGSREEWAEDMIEDVWRAGGRVIFTDGSKMPEKGVGAAYVAMGPGGEVEASGLFKLPDYCTVYQAEAVALRE----SQKRMESREERRLMASDSRAVLSSVSGQSRMTTLVAEIADGARAGDSFLYIPGHQGHAGNEKADELAKLAVEMGKEV 534
V L G FERR++D E PYPPER++LD+TLG +EEWAE++I+ R G V++TDGSK E GVGAA+VA P G+ GLFKLPDYC+ YQAEAV RE +++ + ++ASD AVL+S+ GQ RMT+LV E+ A G SF+Y+PGHQGHAGNE AD LAK A G+ V
Sbjct: 107 VELGG-SFERRLVDWELPYPPERKSLDITLGRKEEWAEELIQP--RPGVGVVYTDGSKK-ESGVGAAFVAQDPEGQNVGQGLFKLPDYCSNYQAEAVVQREGVIWTKEVGHPGVQNWVIASDGGAVLASMKGQRRMTSLVGEVVREAEDGHSFVYVPGHQGHAGNEVADALAKKATVSGRRV 284
BLAST of mRNA_H-akashiwo_Contig1205.2.1 vs. uniprot
Match: A0A7S3Y6K3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6K3_HETAK) HSP 1 Score: 145 bits (365), Expect = 5.780e-40 Identity = 82/98 (83.67%), Postives = 88/98 (89.80%), Query Frame = 1
Query: 229 VEASGLFKLPDYCTVYQAEAVALRESQKRMESREERRLMASDSRAVLSSVSGQSRMTTLVAEIADGARAGDSFLYIPGHQGHAGNEKADELAKLAVEM 522
VEASGLF+LPDYCT+YQAEAV LRE+Q R+E RE RRLMASDSRAVL S+SGQS MTTLVAEI DGARAGD LYIPGHQG AGNEKADELAK+AVEM
Sbjct: 2 VEASGLFRLPDYCTMYQAEAVELREAQVRVEKREGRRLMASDSRAVLPSMSGQSHMTTLVAEITDGARAGD--LYIPGHQGCAGNEKADELAKVAVEM 97
BLAST of mRNA_H-akashiwo_Contig1205.2.1 vs. uniprot
Match: A0A7S3XV03_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV03_HETAK) HSP 1 Score: 142 bits (359), Expect = 1.920e-38 Identity = 85/160 (53.12%), Postives = 111/160 (69.38%), Query Frame = 1
Query: 1 VRLDGMDFERRVLDHERPYPPERRALDVTLGSREEWAEDMIEDVWRAGGRVIFTDGSKMPEKGVGAAYVAMGPGGEVEASGLFKLPDYCTVYQAEAVALRE----SQKRMESREERRLMASDSRAVLSSVSGQSRMTTLVAEIADGARAGDSFLYIPGHQ 468
V L G ERR++D E PYPPER++LD+TLG +EEWAE++I+ R G V++TDGSK E GVGAA+VA P G+ GLFKLPDYC+ YQAEAVA RE +++ + ++ASD AVL+S+ GQ RMT+LV E+ A G SF+Y+PGHQ
Sbjct: 2 VELGG-SCERRLVDWELPYPPERKSLDITLGRKEEWAEELIQP--RPGVGVVYTDGSKK-ESGVGAAFVAQDPEGQNVGQGLFKLPDYCSNYQAEAVAQREGVIWTKEVGHPGVQNWVIASDGGAVLASMKGQRRMTSLVGEVVREAEDGHSFVYVPGHQ 157
BLAST of mRNA_H-akashiwo_Contig1205.2.1 vs. uniprot
Match: A0A7S4DA35_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DA35_HETAK) HSP 1 Score: 141 bits (356), Expect = 1.510e-37 Identity = 81/179 (45.25%), Postives = 110/179 (61.45%), Query Frame = 1
Query: 340 LMASDSRAVLSSVSGQSRMTTLVAEIADGARAGDSFLYIPGHQGHAGNEKADELAKLAVEMGKEVQVPVPRAHTRQIARERTWRQWSEEWSALRALEEDGGQAQGGGKAYFKFAPGLGDLKANVWGNDK-VDSSVLQLLSGHCNFGAYLHRFGRRDTPECTFCGKDEESVGHFLLECKR 873
++ASDSRAVLS+V Q R+T + AE+ A S +Y+P H+G GNE+AD LA LAV G V VPRAHTR++A + W +W EW + + Y +FAP L L+ANVW DK + VLQLLSGHC+ G++LHRF +T + +C + E +VGH+LL C+R
Sbjct: 17 IVASDSRAVLSNVLSQCRLTPITAEVVRLAGDCHSLVYVPAHKGIPGNEEADRLANLAVTNGTYALVDVPRAHTRRLAGDYFWGEWEREWGNAGSADPP--------PVYKRFAPSLEALRANVW--DKGMGVRVLQLLSGHCSLGSFLHRFHLEETAKYEWCDEGE-AVGHYLLRCQR 184
BLAST of mRNA_H-akashiwo_Contig1205.2.1 vs. uniprot
Match: A0A7S3XUZ5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUZ5_HETAK) HSP 1 Score: 141 bits (355), Expect = 1.780e-37 Identity = 89/167 (53.29%), Postives = 113/167 (67.66%), Query Frame = 1
Query: 55 YPPERR-ALDVTL--GSREEWAEDMIEDVWRAGGRVIFTDGSKMPEKGVGAAYVAMGPGGEVEASGLFKLPDYCTVYQAEAVALRE----SQKRMESREERRLMASDSRAVLSSVSGQSRMTTLVAEIADGARAGDSFLYIPGHQGHAGNEKADELAKLAVEMGKEV 534
YPPER+ +LD+TL +EEWAE++IE R G V++TDGSK E GVGAA+VA P G+ GLFKLPDYC+ YQAEAV RE +++ + ++ASD AVL+S+ GQ RMT+LV E+ A G SF+Y+PGHQGHAGNE AD LAK A G+ V
Sbjct: 18 YPPERKKSLDITLVGQKKEEWAEELIEP--RPGVGVVYTDGSKK-ESGVGAAFVAQDPEGQNVGQGLFKLPDYCSNYQAEAVVQREGVIWTKEVGHPGVQNWVIASDGGAVLASMKGQRRMTSLVGEVVREAEDGHSFVYVPGHQGHAGNEVADALAKKATVSGRRV 181 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1205.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1205.2.1 >prot_H-akashiwo_Contig1205.2.1 ID=prot_H-akashiwo_Contig1205.2.1|Name=mRNA_H-akashiwo_Contig1205.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=312bp MDFERRVLDHERPYPPERRALDVTLGSREEWAEDMIEDVWRAGGRVIFTDback to top mRNA from alignment at H-akashiwo_Contig1205:175110..176060+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1205.2.1 ID=mRNA_H-akashiwo_Contig1205.2.1|Name=mRNA_H-akashiwo_Contig1205.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=951bp|location=Sequence derived from alignment at H-akashiwo_Contig1205:175110..176060+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1205:175110..176060+ >mRNA_H-akashiwo_Contig1205.2.1 ID=mRNA_H-akashiwo_Contig1205.2.1|Name=mRNA_H-akashiwo_Contig1205.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=936bp|location=Sequence derived from alignment at H-akashiwo_Contig1205:175110..176060+ (Heterosigma akashiwo CCMP452)back to top |