mRNA_H-akashiwo_Contig1204.1.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1204.1.1 vs. uniprot
Match: A0A7S3Y3C5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3C5_HETAK) HSP 1 Score: 219 bits (557), Expect = 5.450e-67 Identity = 108/168 (64.29%), Postives = 133/168 (79.17%), Query Frame = 1
Query: 1 WETALHGELASLSKNNSYTLTDLPPGANVIGTRWVLSKKFDADGLLVKHKARLLAQGCSQKYRVDFTQTYTPLVNAASLRLLLAISANKGYHVDSLDISTAFLNGDIDGDVY-RQPPDFADPEHPNKVWKPNKALYGLKQSPCIWYLQLHDHLFLQGFKRSGYESCLY 501
++ A+ EL S+ ++ L DLPPGANVIGTRWVLSKKFDADG L K+KARL+AQG +Q+ VDF+ TY+P+V A SLRL+L+I+ANKG+ V++LDISTAFLN DIDGDVY +QPP F D +HP+KVWK KALYGL+QSP +WY LH+ L Q F RS YESCLY
Sbjct: 200 YDRAMLKELGSMESHDVKELVDLPPGANVIGTRWVLSKKFDADGNLQKYKARLVAQGFTQREGVDFSATYSPVVAAPSLRLMLSIAANKGHAVEALDISTAFLNSDIDGDVYVKQPPGFVDKDHPHKVWKLKKALYGLRQSPRLWYNTLHEFLLQQNFVRSDYESCLY 367
BLAST of mRNA_H-akashiwo_Contig1204.1.1 vs. uniprot
Match: A0A7S3Y3B6_HETAK (Hypothetical protein (Fragment) n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3B6_HETAK) HSP 1 Score: 213 bits (543), Expect = 3.990e-65 Identity = 104/168 (61.90%), Postives = 131/168 (77.98%), Query Frame = 1
Query: 1 WETALHGELASLSKNNSYTLTDLPPGANVIGTRWVLSKKFDADGLLVKHKARLLAQGCSQKYRVDFTQTYTPLVNAASLRLLLAISANKGYHVDSLDISTAFLNGDIDGDVY-RQPPDFADPEHPNKVWKPNKALYGLKQSPCIWYLQLHDHLFLQGFKRSGYESCLY 501
++ A+ EL S+ + L DLPPGA+ IGTRW+LSKKFDADG L K+KARL+AQG +Q+ VDF+ TY+P++ A SLRL+L+I+ANKG+ V++LDISTAFLN DIDGDVY +QPP F D +HP+KVWK KALYGL+QSP +WY LH+ L Q F RS YESCLY
Sbjct: 129 YDQAMLKELDSMESHGVKELVDLPPGAHAIGTRWILSKKFDADGNLQKYKARLVAQGFTQREGVDFSTTYSPVIAAPSLRLMLSIAANKGHAVEALDISTAFLNSDIDGDVYVKQPPGFVDKDHPHKVWKLKKALYGLRQSPRLWYNTLHEFLLQQNFVRSDYESCLY 296
BLAST of mRNA_H-akashiwo_Contig1204.1.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK) HSP 1 Score: 174 bits (442), Expect = 1.360e-51 Identity = 83/108 (76.85%), Postives = 94/108 (87.04%), Query Frame = 1
Query: 181 KYRVDFTQTYTPLVNAASLRLLLAISANKGYHVDSLDISTAFLNGDIDGDVY-RQPPDFADPEHPNKVWKPNKALYGLKQSPCIWYLQLHDHLFLQGFKRSGYESCLY 501
K+ +DF QTY+P+VNAASLRLLLAISANKGY VDSLDISTAFLNG + DVY RQPP + DP+HPNKVWK NKALYGLKQSP +WY++LHDHL GFKRSG+ESCLY
Sbjct: 1 KFGIDFQQTYSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAMTDDVYVRQPPSYVDPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLESLGFKRSGHESCLY 108
BLAST of mRNA_H-akashiwo_Contig1204.1.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 167 bits (422), Expect = 9.020e-45 Identity = 81/168 (48.21%), Postives = 117/168 (69.64%), Query Frame = 1
Query: 1 WETALHGELASLSKNNSYTLTDLPPGANVIGTRWVLSKKFDADGLLVKHKARLLAQGCSQKYRVDFTQTYTPLVNAASLRLLLAISANKGYHVDSLDISTAFLNGDIDGDVY-RQPPDFADPEHPNKVWKPNKALYGLKQSPCIWYLQLHDHLFLQGFKRSGYESCLY 501
W A+ E SL ++N + L D P GAN++G RW+L+KK+DADG L K+KARL AQG SQ VD+T T++P+V++ASLR +L I+A++ + +DI TAFL+G ++ D+Y +QP + P +KV K K+LYGLKQ+P WY L+ L QG+ R+GY+SC+Y
Sbjct: 499 WREAVADEYDSLLRHNVWELVDKPSGANIVGCRWILAKKYDADGNLSKYKARLCAQGYSQIEGVDYTNTFSPVVSSASLRTVLTIAASEDMEIHCMDIKTAFLHGKLEEDIYMKQPEGYEVPGMEHKVLKLKKSLYGLKQAPKCWYQNLNGFLLQQGYTRNGYDSCVY 666
BLAST of mRNA_H-akashiwo_Contig1204.1.1 vs. uniprot
Match: Q849B9_ASTYP (Putative gag-pol polyprotein n=1 Tax=Aster yellows phytoplasma TaxID=35779 RepID=Q849B9_ASTYP) HSP 1 Score: 152 bits (383), Expect = 1.890e-42 Identity = 70/167 (41.92%), Postives = 111/167 (66.47%), Query Frame = 1
Query: 1 WETALHGELASLSKNNSYTLTDLPPGANVIGTRWVLSKKFDADGLLVKHKARLLAQGCSQKYRVDFTQTYTPLVNAASLRLLLAISANKGYHVDSLDISTAFLNGDIDGDVYRQPPDFADPEHPNKVWKPNKALYGLKQSPCIWYLQLHDHLFLQGFKRSGYESCLY 501
W A++ EL+S +NNS+ LTDLPPG + ++WV K DADG ++ HKARL+ +GC+Q+ +D+ + Y+P+V +S+R LLA++A K +D +D +AFL GD+ ++Y P+ + E PNKV + K++YGLKQ+ +W +LH L G +S ++SC+Y
Sbjct: 91 WVQAMNQELSSQVQNNSWELTDLPPGRKALNSKWVFKTKRDADGNVICHKARLVVKGCAQRKGIDYDEVYSPVVRYSSVRYLLALAAEKDLQIDQMDAVSAFLQGDLTEEIYMNQPEGSHQE-PNKVCRLRKSIYGLKQASRVWNKKLHSCLTKIGLAQSNFDSCVY 256
BLAST of mRNA_H-akashiwo_Contig1204.1.1 vs. uniprot
Match: B6V6Z8_DROME (Polyprotein n=1 Tax=Drosophila melanogaster TaxID=7227 RepID=B6V6Z8_DROME) HSP 1 Score: 159 bits (403), Expect = 3.430e-42 Identity = 79/168 (47.02%), Postives = 114/168 (67.86%), Query Frame = 1
Query: 1 WETALHGELASLSKNNSYTLTDLPPGANVIGTRWVLSKKFDADGLLVKHKARLLAQGCSQKYRVDFTQTYTPLVNAASLRLLLAISANKGYHVDSLDISTAFLNGDIDGDVY-RQPPDFADPEHPNKVWKPNKALYGLKQSPCIWYLQLHDHLFLQGFKRSGYESCLY 501
W+T++ E +L NN++TL DLPPG IG++WV K D +G + K K+RL+AQGC QK V++++T++P++ ++R+L AI+A K + +DIS A+LNG + +VY RQP +F D +HPNKV K KA+YGLKQS +W L + L GFKRS E+CLY
Sbjct: 824 WKTSMQKEYDALVSNNTWTLCDLPPGQKAIGSKWVFRVKRDKEGNIQKFKSRLVAQGCGQKMGVNYSETFSPVIRYETIRMLFAIAAEKQLCMHQVDISNAYLNGRLQEEVYMRQPQNFIDEKHPNKVLKLQKAIYGLKQSGRVWNDTLDEVLKSIGFKRSKNEACLY 991
BLAST of mRNA_H-akashiwo_Contig1204.1.1 vs. uniprot
Match: A0A5N6Q2H9_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6Q2H9_9ASTR) HSP 1 Score: 156 bits (394), Expect = 8.510e-42 Identity = 73/168 (43.45%), Postives = 110/168 (65.48%), Query Frame = 1
Query: 1 WETALHGELASLSKNNSYTLTDLPPGANVIGTRWVLSKKFDADGLLVKHKARLLAQGCSQKYRVDFTQTYTPLVNAASLRLLLAISANKGYHVDSLDISTAFLNGDIDGDVY-RQPPDFADPEHPNKVWKPNKALYGLKQSPCIWYLQLHDHLFLQGFKRSGYESCLY 501
W+T +H ELA++ KN ++ LT LP G N++G +W+ K DG +VK+KARL+A+G SQ+Y VDF +T+ P+ ++R+++AI+A G+ + LD+ +AFLNGD+ ++Y QP F V+K +KALYGLKQSP WY ++ + GF+RS E LY
Sbjct: 70 WQTTMHEELAAIEKNQTWVLTTLPAGKNLVGLKWLYKTKVGPDGKIVKYKARLVAKGYSQQYGVDFLETFAPVARFETIRVVVAIAAQMGWPIHQLDVKSAFLNGDLSEEIYVEQPEGFLVKGKEQMVYKLHKALYGLKQSPRAWYAKIDGYFAEHGFRRSANEPTLY 237
BLAST of mRNA_H-akashiwo_Contig1204.1.1 vs. uniprot
Match: Q7XET2_ORYSJ (Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7XET2_ORYSJ) HSP 1 Score: 158 bits (399), Expect = 1.190e-41 Identity = 76/168 (45.24%), Postives = 113/168 (67.26%), Query Frame = 1
Query: 1 WETALHGELASLSKNNSYTLTDLPPGANVIGTRWVLSKKFDADGLLVKHKARLLAQGCSQKYRVDFTQTYTPLVNAASLRLLLAISANKGYHVDSLDISTAFLNGDIDGDVY-RQPPDFADPEHPNKVWKPNKALYGLKQSPCIWYLQLHDHLFLQGFKRSGYESCLY 501
W A+H EL + +N +TL + P G NVIGT+WV K + DGL+V++KARL+AQG +Q +DF +T+ P+ ++RLLLA +A+KG+ + +D+ +AFLNG I +VY +QPP F +P+ PN V+K +KALYGLKQ+P WY +L + L +GF + L+
Sbjct: 922 WINAMHEELENFERNKVWTLVEPPSGHNVIGTKWVFKNKQNEDGLIVRNKARLVAQGFTQVEGLDFDETFAPVARIEAIRLLLAFAASKGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPDFPNHVFKLSKALYGLKQAPRAWYDRLKNFLLAKGFTMGKVDKTLF 1089
BLAST of mRNA_H-akashiwo_Contig1204.1.1 vs. uniprot
Match: L0P1Q5_PHYED (PH01B035L11.21 protein n=1 Tax=Phyllostachys edulis TaxID=38705 RepID=L0P1Q5_PHYED) HSP 1 Score: 158 bits (399), Expect = 1.220e-41 Identity = 73/168 (43.45%), Postives = 114/168 (67.86%), Query Frame = 1
Query: 1 WETALHGELASLSKNNSYTLTDLPPGANVIGTRWVLSKKFDADGLLVKHKARLLAQGCSQKYRVDFTQTYTPLVNAASLRLLLAISANKGYHVDSLDISTAFLNGDIDGDVY-RQPPDFADPEHPNKVWKPNKALYGLKQSPCIWYLQLHDHLFLQGFKRSGYESCLY 501
W A+H EL + +N ++L + P G N+IGT+WV K DG+++++KARL+AQG SQ +DF +T+ P+ ++R+LLA +A+KG+ + +D+ +AFLNG I+ +VY RQPP F +P++PN V+K +KALYGLKQ+P WY +L +L GF+ + L+
Sbjct: 1484 WVNAMHEELENFERNKVWSLVEPPRGHNIIGTKWVFKNKQSEDGVIIRNKARLVAQGFSQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLYQMDVKSAFLNGLIEEEVYVRQPPGFENPKYPNHVFKLSKALYGLKQAPRAWYERLKSYLLSHGFEMGKVDKTLF 1651
BLAST of mRNA_H-akashiwo_Contig1204.1.1 vs. uniprot
Match: W8BPA6_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BPA6_CERCA) HSP 1 Score: 154 bits (390), Expect = 4.400e-41 Identity = 77/168 (45.83%), Postives = 111/168 (66.07%), Query Frame = 1
Query: 1 WETALHGELASLSKNNSYTLTDLPPGANVIGTRWVLSKKFDADGLLVKHKARLLAQGCSQKYRVDFTQTYTPLVNAASLRLLLAISANKGYHVDSLDISTAFLNGDIDGDVY-RQPPDFADPEHPNKVWKPNKALYGLKQSPCIWYLQLHDHLFLQGFKRSGYESCLY 501
W A+ E SL+K+ ++TLTD P G NVIG RWV KK+D G L K+KARL+AQGCSQK DF TY P+V ++RL+L+++A + V+ +D+ A+LNG+++ ++Y RQP F D PNKV + K+LYGLKQ+ W +++ L GFKR ++C+Y
Sbjct: 316 WRVAMQAEYDSLTKSGAWTLTDRPHGKNVIGCRWVFVKKYDETGKLEKYKARLVAQGCSQKPGEDFELTYAPVVRHTTIRLILSLAAQQKLLVNHIDVVAAYLNGELEEELYMRQPEGFVDKTKPNKVCRLQKSLYGLKQAGRYWNEKINKVLCEMGFKRCKADNCVY 483 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1204.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1204.1.1 >prot_H-akashiwo_Contig1204.1.1 ID=prot_H-akashiwo_Contig1204.1.1|Name=mRNA_H-akashiwo_Contig1204.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=167bp WETALHGELASLSKNNSYTLTDLPPGANVIGTRWVLSKKFDADGLLVKHKback to top mRNA from alignment at H-akashiwo_Contig1204:56725..57225+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1204.1.1 ID=mRNA_H-akashiwo_Contig1204.1.1|Name=mRNA_H-akashiwo_Contig1204.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=501bp|location=Sequence derived from alignment at H-akashiwo_Contig1204:56725..57225+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1204:56725..57225+ >mRNA_H-akashiwo_Contig1204.1.1 ID=mRNA_H-akashiwo_Contig1204.1.1|Name=mRNA_H-akashiwo_Contig1204.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=501bp|location=Sequence derived from alignment at H-akashiwo_Contig1204:56725..57225+ (Heterosigma akashiwo CCMP452)back to top |